Vladimir Sentchilo

Publications | Phd and Masters theses

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30 publications

2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2013 | 2010 | 2009 | 2008 | 2003 | 2001 | 2000 |
2024
Niche availability and competitive loss by facilitation control proliferation of bacterial strains intended for soil microbiome interventions.
Čaušević S., Dubey M., Morales M., Salazar G., Sentchilo V., Carraro N., Ruscheweyh H.J., Sunagawa S., van der Meer J.R., 2024/03/22. Nature communications, 15 (1) p. 2557. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E3381CFCB35A]
Spatial structure, chemotaxis and quorum sensing shape bacterial biomass accumulation in complex porous media.
Scheidweiler D., Bordoloi A.D., Jiao W., Sentchilo V., Bollani M., Chhun A., Engel P., de Anna P., 2024/01/02. Nature communications, 15 (1) p. 191. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C15F89398E71]
2023
Changes in structure and assembly of a species-rich soil natural community with contrasting nutrient availability upon establishment of a plant-beneficial Pseudomonas in the wheat rhizosphere.
Garrido-Sanz D., Čaušević S., Vacheron J., Heiman C.M., Sentchilo V., van der Meer J.R., Keel C., 2023/09/29. Microbiome, 11 (1) p. 214. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_46EF5F18A042]
Fitness-Conditional Genes for Soil Adaptation in the Bioaugmentation Agent Pseudomonas veronii 1YdBTEX2.
Morales M., Sentchilo V., Carraro N., Causevic S., Vuarambon D., van der Meer J.R., 2023/04/27. mSystems, 8 (2) pp. e0117422. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E45105A859F9]
2022
A bistable prokaryotic differentiation system underlying development of conjugative transfer competence.
Sulser S., Vucicevic A., Bellini V., Moritz R., Delavat F., Sentchilo V., Carraro N., van der Meer J.R., 2022/06. PLoS genetics, 18 (6) pp. e1010286. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_4D561966E16C]
Reproducible Propagation of Species-Rich Soil Bacterial Communities Suggests Robust Underlying Deterministic Principles of Community Formation.
Čaušević S., Tackmann J., Sentchilo V., von Mering C., van der Meer J.R., 2022/04/26. mSystems, 7 (2) pp. e0016022. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7CFDBD42F375]
2021
Genome-wide gene expression changes of Pseudomonas veronii 1YdBTEX2 during bioaugmentation in polluted soils.
Morales M., Sentchilo V., Hadadi N., van der Meer J.R., 2021/04/29. Environmental microbiome, 16 (1) p. 8. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_48CD2F7B7CBA]
2020
Insights into Mobile Genetic Elements of the Biocide-Degrading Bacterium Pseudomonas nitroreducens HBP-1.
Carraro N., Sentchilo V., Polák L., Bertelli C., van der Meer J.R., 2020/08/12. Genes, 11 (8) p. 930. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_206C29759190]
Mechanistic insights into bacterial metabolic reprogramming from omics-integrated genome-scale models.
Hadadi N., Pandey V., Chiappino-Pepe A., Morales M., Gallart-Ayala H., Mehl F., Ivanisevic J., Sentchilo V., Meer JRV, 2020. NPJ systems biology and applications, 6 (1) p. 1. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AED3DDBE9005]
2019
Computational redesign of the Escherichia coli ribose-binding protein ligand binding pocket for 1,3-cyclohexanediol and cyclohexanol.
Tavares D., Reimer A., Roy S., Joublin A., Sentchilo V., van der Meer J.R., 2019/11/15. Scientific reports, 9 (1) p. 16940. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5A2ABAB8B9CC]
 
Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5.
Ellegaard K.M., Brochet S., Bonilla-Rosso G., Emery O., Glover N., Hadadi N., Jaron K.S., van der Meer J.R., Robinson-Rechavi M., Sentchilo V. et al., 2019/05. Molecular ecology, 28 (9) pp. 2224-2237. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_37C4AFA6D4D6]
2018
Physiological and transcriptome changes induced by Pseudomonas putida acquisition of an integrative and conjugative element.
Miyazaki R., Yano H., Sentchilo V., van der Meer J.R., 2018/04/03. Scientific reports, 8 (1) p. 5550. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_73BE1A6DF8A9]
2017
Complete alanine scanning of the Escherichia coli RbsB ribose binding protein reveals residues important for chemoreceptor signaling and periplasmic abundance.
Reimer A., Maffenbeier V., Dubey M., Sentchilo V., Tavares D., Gil M.H., Beggah S., van der Meer J.R., 2017/08/15. Scientific reports, 7 (1) p. 8245. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5AD53A0AA296]
Draft Genome Sequence of Microbacterium foliorum Strain 122 Isolated from a Plant Growing in a Chronically Hydrocarbon-Contaminated Site.
Lumactud R., Fulthorpe R., Sentchilo V., van der Meer J.R., 2017. Genome Announcements, 5 (21) pp. e00434-17. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_63E505728E9E]
Draft Genome Sequence of Plantibacterflavus Strain 251 Isolated from a Plant Growing in a Chronically Hydrocarbon-Contaminated Site.
Lumactud R., Fulthorpe R., Sentchilo V., van der Meer J.R., 2017. Genome announcements, 5 (17) p. 0. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_7F75295C2E48]
2016
The Genome of the Toluene-Degrading Pseudomonas veronii Strain 1YdBTEX2 and Its Differential Gene Expression in Contaminated Sand.
Morales M., Sentchilo V., Bertelli C., Komljenovic A., Kryuchkova-Mostacci N., Bourdilloud A., Linke B., Goesmann A., Harshman K., Segers F. et al., 2016. PloS one, 11 (11) pp. e0165850. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_14197457242A]
2015
Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds.
Miyazaki R., Bertelli C., Benaglio P., Canton J., De Coi N., Gharib W.H., Gjoksi B., Goesmann A., Greub G., Harshman K. et al., 2015. Environmental Microbiology, 17 (1) pp. 91-104.
[URN][DOI][WoS][Pmid][serval:BIB_EBE76C19261B]
2013
Community-wide plasmid gene mobilization and selection.
Sentchilo V., Mayer A.P., Guy L., Miyazaki R., Green Tringe S., Barry K., Malfatti S., Goessmann A., Robinson-Rechavi M., van der Meer J.R., 2013. ISME Journal, 7 (6) pp. 1173-1186.
[URN][DOI][WoS][Pmid][serval:BIB_B5128FCC3FB5]
 
Examining chemical compound biodegradation at low concentrations through bacterial cell proliferation.
Czechowska K., Sentchilo V., Beggah S., Rey S., Seyfried M., van der Meer J.R., 2013. Environmental Science and Technology, 47 (4) pp. 1913-1921.
[DOI][WoS][Pmid][serval:BIB_904323C94D10]
 
The clc element and related genomic islands in Proteobacteria
Miyazaki R., Minoia M., Pradervand N., Sentchilo V., Sulser S., Reinhard F., van der Meer J. R., 2013/01. p. 336 dans Roberts A.P., Mullany P. (eds.) Bacterial integrative mobile genetic elements, Landes Bioscience.
[serval:BIB_E4924A2BDD7E]
2010
 
Development of a multistrain bacterial bioreporter platform for the monitoring of hydrocarbon contaminants in marine environments.
Tecon R., Beggah S., Czechowska K., Sentchilo V., Chronopoulou P.M., McGenity T.J., van der Meer J.R., 2010. Environmental science and technology, 44 (3) pp. 1049-1055. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4DFCA9B14DB6]
Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13.
Gaillard M., Pradervand N., Minoia M., Sentchilo V., Johnson D.R., van der Meer J.R., 2010. BMC Microbiology, 10 p. 153.
[URN][DOI][WoS][Pmid][serval:BIB_4301FC5CF60A]
2009
 
Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13.
Sentchilo V., Czechowska K., Pradervand N., Minoia M., Miyazaki R., van der Meer J.R., 2009. Molecular microbiology, 72 (5) pp. 1293-1306. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_42A460EF5F13]
2008
Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas.
Minoia M., Gaillard M., Reinhard F., Stojanov M., Sentchilo V., van der Meer J.R., 2008. Proceedings of the National Academy of Sciences of the United States of America, 105 (52) pp. 20792-20797. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_FA49C421D122]
2003
 
Characterization of two alternative promoters for integrase expression in the clc genomic island of Pseudomonas sp. strain B13.
Sentchilo V., Zehnder A.J., van der Meer J.R., 2003. Molecular Microbiology, 49 (1) pp. 93-104.
[DOI][WoS][Pmid][serval:BIB_F79CFAABA4F8]
 
Genomic islands and the evolution of catabolic pathways in bacteria.
van der Meer J.R., Sentchilo V., 2003. Current Opinion in Biotechnology, 14 (3) pp. 248-254.
[DOI][WoS][Pmid][serval:BIB_032E4BAFD3C5]
 
Ilots génomiques et transfert horizontal de gènes entre bactéries
Van der Meer J.R., Gaillard M., Sentchilo V., 2003. EAWAG News, 56 pp. 6-9.
[serval:BIB_27981]
 
Unusual integrase gene expression on the clc genomic island in Pseudomonas sp. strain B13.
Sentchilo V., Ravatn R., Werlen C., Zehnder A.J., van der Meer J.R., 2003. Journal of Bacteriology, 185 (15) pp. 4530-4538.
[DOI][WoS][Pmid][serval:BIB_A4832C2709FB]
2001
 
The clc element of Pseudomonas sp. strain B13 and other mobile degradative elements employing phage-like integrases.
van der Meer J.R., Ravatn R., Sentchilo V., 2001. Archives of Microbiology, 175 (2) pp. 79-85. Peer-reviewed.
[WoS][Pmid][serval:BIB_E6ACA67CDEA4]
2000
 
Molecular diversity of plasmids bearing genes that encode toluene and xylene metabolism in Pseudomonas strains isolated from different contaminated sites in Belarus.
Sentchilo V.S., Perebituk A.N., Zehnder A.J., van der Meer J.R., 2000. Applied and Environmental Microbiology, 66 (7) pp. 2842-2852. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0011C492494B]
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