Johann Weber

Publications | Phd and Masters theses

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30 publications

2016 | 2015 | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | 2008 | 2006 | 2005 | 2004 | 2002 | 1998 | 1993 | 1992 | 1990 | 1989 |
2016
Complete Genome Sequence of Mycoplasma mycoides subsp. mycoides T1/44, a Vaccine Strain against Contagious Bovine Pleuropneumonia.
Gourgues G., Barré A., Beaudoing E., Weber J., Magdelenat G., Barbe V., Schieck E., Jores J., Vashee S., Blanchard A. et al., 2016. Genome Announcements, 4 (2) pp. e00263-16. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_1335DEC3AD81]
 
Galactofuranose in Mycoplasma mycoides is important for membrane integrity and conceals adhesins but does not contribute to serum resistance.
Schieck E., Lartigue C., Frey J., Vozza N., Hegermann J., Miller R.A., Valguarnera E., Muriuki C., Meens J., Nene V. et al., 2016. Molecular Microbiology, 99 (1) pp. 55-70.
[DOI][WoS][Pmid][serval:BIB_F7DF71B2D2F2]
2015
High quality draft genomes of the Mycoplasma mycoides subsp. mycoides challenge strains Afadé and B237.
Fischer A., Santana-Cruz I., Hegerman J., Gourlé H., Schieck E., Lambert M., Nadendla S., Wesonga H., Miller R.A., Vashee S. et al., 2015. Standards in Genomic Sciences, 10 p. 89.
[URN][DOI][WoS][Pmid][serval:BIB_2F1B006DAFC1]
Wounding of Arabidopsis halleri leaves enhances cadmium accumulation that acts as a defense against herbivory.
Plaza S., Weber J., Pajonk S., Thomas J., Talke I.N., Schellenberg M., Pradervand S., Burla B., Geisler M., Martinoia E. et al., 2015. Biometals, 28 (3) pp. 521-528.
[URN][DOI][WoS][Pmid][serval:BIB_BE91CDEC2816]
2014
Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.
Hilty M., Wüthrich D., Salter S.J., Engel H., Campbell S., Sá-Leão R., de Lencastre H., Hermans P., Sadowy E., Turner P. et al., 2014. Genome Biology and Evolution, 6 (12) pp. 3281-3294.
[URN][DOI][WoS][Pmid][serval:BIB_A925F9C3D7DB]
2013
 
Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacterium Sphingomonas wittichii RW1.
Roggo C., Coronado E., Moreno-Forero S.K., Harshman K., Weber J., van der Meer J.R., 2013. Environmental Microbiology, 15 (10) pp. 2681-2695.
[DOI][WoS][Pmid][serval:BIB_98FA785B3C61]
Global transcriptome sequencing identifies chlamydospore specific markers in Candida albicans and Candida dubliniensis.
Palige K., Linde J., Martin R., Böttcher B., Citiulo F., Sullivan D.J., Weber J., Staib C., Rupp S., Hube B. et al., 2013. PLoS One, 8 (4) pp. e61940.
[URN][DOI][WoS][Pmid][serval:BIB_1253E5DD657F]
 
Identification of Multiple Mechanisms of Resistance to Vemurafenib in a Patient with BRAFV600E-Mutated Cutaneous Melanoma Successfully Rechallenged after Progression.
Romano E., Pradervand S., Paillusson A., Weber J., Harshman K., Muehlethaler K., Speiser D., Peters S., Rimoldi D., Michielin O., 2013. Clinical Cancer Research, 19 (20) pp. 5749-5757.
[DOI][WoS][Pmid][serval:BIB_F614E54C2488]
2012
 
Impact of salt on cardiac differential gene expression and coronary lesion in normotensive mineralocorticoid-treated mice.
Wang Q., Domenighetti A.A., Schäfer S.C., Weber J., Simon A., Maillard M.P., Pedrazzini T., Chen J., Lehr H.A., Burnier M., 2012. American Journal of Physiology. Regulatory, Integrative and Comparative Physiology, 302 (9) pp. R1025-R1033.
[DOI][Pmid][serval:BIB_5B4B77092495]
2011
 
Priming for enhanced defence responses by specific inhibition of the Arabidopsis response to coronatine.
Tsai C.H., Singh P., Chen C.W., Thomas J., Weber J., Mauch-Mani B., Zimmerli L., 2011. Plant Journal, 65 (3) pp. 469-479.
[DOI][WoS][Pmid][serval:BIB_F797A10ADCC6]
2010
 
Concordance among digital gene expression, microarrays, and qPCR when measuring differential expression of microRNAs.
Pradervand S., Weber J., Lemoine F., Consales F., Paillusson A., Dupasquier M., Thomas J., Richter H., Kaessmann H., Beaudoing E. et al., 2010. Biotechniques, 48 (3) pp. 219-222.
[DOI][WoS][Pmid][serval:BIB_BCC9074E34BD]
 
Differential gene expression in the pathogenic dermatophyte Arthroderma benhamiae in vitro versus during infection.
Staib P., Zaugg C., Mignon B., Weber J., Grumbt M., Pradervand S., Harshman K., Monod M., 2010. Microbiology, 156 (Pt 3) pp. 884-895. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_EDC50B528F78]
2009
Comprehensive analysis of Arabidopsis expression level polymorphisms with simple inheritance.
Plantegenet S., Weber J., Goldstein D.R., Zeller G., Nussbaumer C., Thomas J., Weigel D., Harshman K., Hardtke C.S., 2009. Molecular Systems Biology, 5 p. 242. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_4FFA2CBD1C42]
 
Gene expression profiling in the human pathogenic dermatophyte Trichophyton rubrum during growth on proteins.
Zaugg C., Monod M., Weber J., Harshman K., Pradervand S., Thomas J., Bueno M., Giddey K., Staib P., 2009. Eukaryotic Cell, 8 (2) pp. 241-250. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_76E5A40AB1D6]
 
Impact of normalization on miRNA microarray expression profiling.
Pradervand S., Weber J., Thomas J., Bueno M., Wirapati P., Lefort K., Dotto G.P., Harshman K., 2009. RNA, 15 (3) pp. 493-501. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2FCA2A7EA859]
 
Profiling of T-cell receptor signaling complex assembly in human CD4 T-lymphocytes using RP protein arrays.
Brembilla N.C., Cohen-Salmon I., Weber J., Rüegg C., Quadroni M., Harshman K., Doucey M.A., 2009. Proteomics, 9 (2) pp. 299-309.
[DOI][WoS][Pmid][serval:BIB_027AC52D72F9]
2008
 
Affymetrix Whole-Transcript Human Gene 1.0 ST array is highly concordant with standard 3' expression arrays.
Pradervand S., Paillusson A., Thomas J., Weber J., Wirapati P., Hagenbüchle O., Harshman K., 2008. BioTechniques, 44 (6) pp. 759-762. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4DC21B8F5AD1]
 
c-Cbl expression levels regulate the functional responses of human central and effector memory CD4 T cells.
Brembilla N.C., Weber J., Rimoldi D., Pradervand S., Schütz F., Pantaleo G., Rüegg C., Quadroni M., Harshman K., Doucey M.A., 2008. Blood, 112 (3) pp. 652-660.
[DOI][WoS][Pmid][serval:BIB_6DDFA2713E61]
2006
 
Rapid accumulation of trihydroxy oxylipins and resistance to the bean rust pathogen Uromyces fabae following wounding in Vicia faba.
Walters D.R., Cowley T., Weber H., 2006. Annals of Botany, 97 (5) pp. 779-784. Peer-reviewed.
[DOI][Pmid][serval:BIB_EB4952B4FE27]
2005
 
Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation.
Nagpal P., Ellis C.M., Weber H., Ploense S.E., Barkawi L.S., Guilfoyle T.J., Hagen G., Alonso J.M., Cohen J.D., Farmer E.E. et al., 2005. Development (cambridge, England), 132 (18) pp. 4107-4118.
[DOI][Pmid][serval:BIB_938D0330D5F3]
 
Changes in oxylipins in compatible and incompatible interactions between oilseed rape and the downy mildew pathogen Peronospora parasitica
Walters Dale Ronald, Cowley Tracy, Weber Hans, Nashaat Nash.I., 2005. Physiological and Molecular Plant Pathology, 67 (3-5) pp. 268-273.
[DOI][serval:BIB_A4D94B181E7E]
2004
 
The Tomato mosaic virus 30 kDa movement protein interacts differentially with the resistance genes Tm-2 and Tm-2(2).
Weber H., Ohnesorge S., Silber M.V., Pfitzner A.J., 2004. Archives of Virology, 149 (8) pp. 1499-1514.
[DOI][Pmid][serval:BIB_A614CD845A34]
2002
 
Fatty acid-derived signals in plants.
Weber H., 2002. Trends In Plant Science, 7 (5) pp. 217-224.
[Pmid][serval:BIB_FB9718DB645D]
1998
 
Fatty acid signaling in Arabidopsis.
Farmer E.E., Weber H., Vollenweider S., 1998. Planta, 206 (2) pp. 167-174.
[DOI][WoS][Pmid][serval:BIB_A4297C4A3AA6]
 
Tm-2(2) resistance in tomato requires recognition of the carboxy terminus of the movement protein of tomato mosaic virus.
Weber H., Pfitzner A.J., 1998. Molecular Plant-microbe Interactions : Mpmi, 11 (6) pp. 498-503.
[DOI][Pmid][serval:BIB_F6151313F7F8]
1993
 
Two amino acid substitutions in the tomato mosaic virus 30-kilodalton movement protein confer the ability to overcome the Tm-2(2) resistance gene in the tomato.
Weber H., Schultze S., Pfitzner A.J., 1993. Journal of Virology, 67 (11) pp. 6432-6438.
[Pmid][serval:BIB_3CF896729399]
1992
 
A cDNA clone of tomato mosaic virus is infectious in plants.
Weber H., Haeckel P., Pfitzner A.J., 1992. Journal of Virology, 66 (6) pp. 3909-3912.
[Pmid][serval:BIB_F627304F72F8]
1990
 
Effect of canine surfactant protein (SP-A) on the respiratory burst of phagocytic cells.
Weber H., Heilmann P., Meyer B., Maier K.L., 1990. Febs Letters, 270 (1-2) pp. 90-94.
[Pmid][serval:BIB_9B9C8D91F8C6]
 
Two-dimensional electrophoresis of dog bronchoalveolar lavage fluid proteins.
Lenz A.G., Meyer B., Weber H., Maier K., 1990. Electrophoresis, 11 (6) pp. 510-513.
[DOI][Pmid][serval:BIB_D5A48138457C]
1989
 
Different selectivities of oxidants during oxidation of methionine residues in the alpha-1-proteinase inhibitor.
Maier K.L., Matejkova E., Hinze H., Leuschel L., Weber H., Beck-Speier I., 1989. Febs Letters, 250 (2) pp. 221-226.
[Pmid][serval:BIB_6A055E8D1898]
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