Plateforme de microscopie électronique

Equipe principale
Publications | Mémoires et thèses

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103 publications

2024 | 2023 | 2022 | 2021 | 2020 | 2019 | 2018 | 2017 | 2016 | 2015 | 2014 | 2013 | 2012 | 2010 | 2009 | 2008 | 2007 | 2006 | 2004 | 2003 | 1998 | 1996 |
2024
 
Ume6-dependent pathways of morphogenesis and biofilm formation in Candida auris.
Louvet M., Li J., Brandalise D., Bachmann D., Sala de Oyanguren F., Labes D., Jacquier N., Genoud C., Mucciolo A., Coste A.T. et al., 2024/11/05. Microbiology spectrum, 12 (11) pp. e0153124. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_21541699EAF6]
BCL2L13 at endoplasmic reticulum-mitochondria contact sites regulates calcium homeostasis to maintain skeletal muscle function.
Grepper D., Tabasso C., Zanou N., Aguettaz AKF, Castro-Sepulveda M., Ziegler D.V., Lagarrigue S., Arribat Y., Martinotti A., Ebrahimi A. et al., 2024/08/16. iScience, 27 (8) p. 110510. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_4B2C6F7B17A6]
Work smart, not hard: How array tomography can help increase the ultrastructure data output.
Kolotuev I., 2024/07. Journal of microscopy, 295 (1) pp. 42-60. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_4A33BFEF6727]
The GPAT4/6/8 clade functions in Arabidopsis root suberization nonredundantly with the GPAT5/7 clade required for suberin lamellae.
Gully K., Berhin A., De Bellis D., Herrfurth C., Feussner I., Nawrath C., 2024/05/21. Proceedings of the National Academy of Sciences of the United States of America, 121 (21) pp. e2314570121. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_BAEF7CC0A5B5]
Host starvation and in hospite degradation of algal symbionts shape the heat stress response of the Cassiopea-Symbiodiniaceae symbiosis
Toullec G., Rädecker N., Pogoreutz C., Banc-Prandi G., Escrig S., Genoud C., Olmos C. M., Spangenberg J., Meibom A., 2024/02/29..
[URN][DOI][Pmid][serval:BIB_B39FB92537EC]
Host-derived organic acids enable gut colonization of the honey bee symbiont Snodgrassella alvi.
Quinn A., El Chazli Y., Escrig S., Daraspe J., Neuschwander N., McNally A., Genoud C., Meibom A., Engel P., 2024/02. Nature microbiology, 9 (2) pp. 477-489. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5EE5F5ED8979]
A suberized exodermis is required for tomato drought tolerance.
Cantó-Pastor A., Kajala K., Shaar-Moshe L., Manzano C., Timilsena P., De Bellis D., Gray S., Holbein J., Yang H., Mohammad S. et al., 2024/01. Nature plants, 10 (1) pp. 118-130. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9804252BE166]
2023
 
Air channels create a directional light signal to regulate hypocotyl phototropism.
Nawkar G.M., Legris M., Goyal A., Schmid-Siegert E., Fleury J., Mucciolo A., De Bellis D., Trevisan M., Schueler A., Fankhauser C., 2023/11/24. Science, 382 (6673) pp. 935-940. Peer-reviewed.
[DOI][Pmid][serval:BIB_B429B9CB56F0]
 
Plant cell wall patterning and expansion mediated by protein-peptide-polysaccharide interaction.
Moussu S., Lee H.K., Haas K.T., Broyart C., Rathgeb U., De Bellis D., Levasseur T., Schoenaers S., Fernandez G.S., Grossniklaus U. et al., 2023/11/10. Science, 382 (6671) pp. 719-725. Peer-reviewed.
[DOI][Pmid][serval:BIB_B943E3FBF138]
MALT-1 shortens lifespan by inhibiting autophagy in the intestine of C. elegans.
Vérièpe-Salerno J., Podavini S., Long MJC, Kolotuev I., Cuendet M., Thome M., 2023/11/09. Autophagy reports, 2 (1) p. 2277584. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_D6E4081D3FDA]
A sex-specific switch in a single glial cell patterns the apical extracellular matrix.
Fung W., Tan T.M., Kolotuev I., Heiman M.G., 2023/10/09. Current biology, 33 (19) pp. 4174-4186.e7. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_C7E4419B8677]
SEM3De: image restoration for FIB-SEM.
Serir R.H., Deliot A., Kizilyaprak C., Daraspe J., Walczak C., Canini F., Leleu A., Marco S., Ronzon F., Messaoudi C., 2023/09. Bioinformatics advances, 3 (1) pp. vbad119. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_ABEFF7456FCB]
 
Uptake without inactivation of human adenovirus type 2 by Tetrahymena pyriformis ciliates.
Olive M., Daraspe J., Genoud C., Kohn T., 2023/07/19. Environmental science. Processes & impacts, 25 (7) pp. 1181-1192. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_EC70B09B0CA8]
Correlated cryo-SEM and CryoNanoSIMS imaging of biological tissue.
Meibom A., Plane F., Cheng T., Grandjean G., Haldimann O., Escrig S., Jensen L., Daraspe J., Mucciolo A., De Bellis D. et al., 2023/06/07. BMC biology, 21 (1) p. 126. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_C21C47F6A567]
 
Basal stem cell progeny establish their apical surface in a junctional niche during turnover of an adult barrier epithelium.
Galenza A., Moreno-Roman P., Su Y.H., Acosta-Alvarez L., Debec A., Guichet A., Knapp J.M., Kizilyaprak C., Humbel B.M., Kolotuev I. et al., 2023/05. Nature cell biology, 25 (5) pp. 658-671. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2250401B2321]
The architecture of Cidec-mediated interfaces between lipid droplets.
Ganeva I., Lim K., Boulanger J., Hoffmann P.C., Muriel O., Borgeaud A.C., Hagen WJH, Savage D.B., Kukulski W., 2023/02/28. Cell reports, 42 (2) p. 112107. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D48533B2E4A4]
 
Loss of Hepatic Leucine-Rich Repeat-Containing G-Protein Coupled Receptors 4 and 5 Promotes Nonalcoholic Fatty Liver Disease.
Saponara E., Penno C., Orsini V., Wang Z.Y., Fischer A., Aebi A., Matadamas-Guzman M.L., Brun V., Fischer B., Brousseau M. et al., 2023/02. The American journal of pathology, 193 (2) pp. 161-181. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_CA2772E13AFC]
 
Foraging on host synthesized metabolites enables the bacterial symbiont<i>Snodgrassella alvi</i>to colonize the honey bee gut
Quinn A, Chazli YE, Escrig S, Daraspe J, Neuschwander N, McNally A, Genoud C, Meibom A, Engel P, 2023/01..
[DOI][serval:BIB_E6C4D5725210]
HP1 proteins regulate nucleolar structure and function by secluding pericentromeric constitutive heterochromatin.
Ballmer D, Tardat M, Ortiz R, Graff-Meyer A, Ozonov EA, Genoud C, Peters AH, Fanourgakis G, 2023/01. Nucleic acids research. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_925828398040]
 
Mitochondria morphometry in 3D datasets obtained from mouse brains with serial block-face scanning electron microscopy
Jiao Wei, Chatton Jean-Yves, Genoud Christel, 2023. pp. 197-211 dans Volume Electron Microscopy, Elsevier.
[DOI][WoS][Pmid][serval:BIB_AE173E04DA09]
2022
Antibiotic Exposure Leads to Reduced Phage Susceptibility in Vancomycin Intermediate Staphylococcus aureus (VISA).
McCallin S., Menzi C., Lassen S., Daraspe J., Oechslin F., Moreillon P., 2022/07/19. Antimicrobial agents and chemotherapy, 66 (7) pp. e0224721. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D6EF9784BB73]
Volume electron microscopy.
Peddie C.J., Genoud C., Kreshuk A., Meechan K., Micheva K.D., Narayan K., Pape C., Parton R.G., Schieber N.L., Schwab Y. et al., 2022/07/07. Nature reviews. Methods primers, 2 p. 51. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6FE84FD376F0]
Active PD-L1 incorporation within HIV virions functionally impairs T follicular helper cells.
Munoz O., Banga R., Schelling R., Procopio F.A., Mastrangelo A., Nortier P., Ohmiti K., Daraspe J., Cavassini M., Fenwick C. et al., 2022/07. PLoS pathogens, 18 (7) pp. e1010673. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_BEB839579791]
Neurofilament light chain plasma levels are associated with area of brain damage in experimental cerebral malaria.
Wai C.H., Jin J., Cyrklaff M., Genoud C., Funaya C., Sattler J., Maceski A., Meier S., Heiland S., Lanzer M. et al., 2022/06/24. Scientific reports, 12 (1) p. 10726. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F63C13E20954]
 
Cross-modality synthesis of EM time series and live fluorescence imaging.
Santella A., Kolotuev I., Kizilyaprak C., Bao Z., 2022/06/06. eLife, 11 pp. e77918. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_755570EF144E]
Analysis of exocyst function in endodermis reveals its widespread contribution and specificity of action.
Hématy K., De Bellis D., Wang X., Mähönen A.P., Geldner N., 2022/06/01. Plant physiology, 189 (2) pp. 557-566. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_04A03115A562]
Extracellular vesiculo-tubular structures associated with suberin deposition in plant cell walls.
De Bellis D., Kalmbach L., Marhavy P., Daraspe J., Geldner N., Barberon M., 2022/03/18. Nature communications, 13 (1) p. 1489. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9F962C3CD256]
 
Renal tubular peroxisomes are dispensable for normal kidney function.
Ansermet C., Centeno G., Pradervand S., Harmacek D., Garcia A., Daraspe J., Kocherlakota S., Baes M., Bignon Y., Firsov D., 2022/02/22. JCI insight, 7 (4) pp. e155836. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E7A0BACF576D]
CASP microdomain formation requires cross cell wall stabilization of domains and non-cell autonomous action of LOTR1.
Kolbeck A., Marhavý P., De Bellis D., Li B., Kamiya T., Fujiwara T., Kalmbach L., Geldner N., 2022/01/14. eLife, 11 pp. e69602. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_27275F0FABB8]
Low number of neurosecretory vesicles in neuroblastoma impairs massive catecholamine release and prevents hypertension.
Mühlethaler-Mottet A., Uccella S., Marchiori D., La Rosa S., Daraspe J., Balmas Bourloud K., Beck Popovic M., Eugster P.J., Grouzmann E., Abid K., 2022. Frontiers in endocrinology, 13 p. 1027856. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7CBCA91E69DA]
2021
Complete loss of H3K9 methylation dissolves mouse heterochromatin organization
Montavon Thomas, Shukeir Nicholas, Erikson Galina, Engist Bettina, Onishi-Seebacher Megumi, Ryan Devon, Musa Yaarub, Mittler Gerhard, Meyer Alexandra Graff, Genoud Christel et al., 2021/12. Nature Communications, 12 (1). Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_16599BF00BC3]
 
Ablation of glucokinase-expressing tanycytes impacts energy balance and increases adiposity in mice.
Rohrbach A., Caron E., Dali R., Brunner M., Pasquettaz R., Kolotuev I., Santoni F., Thorens B., Langlet F., 2021/11. Molecular metabolism, 53 p. 101311. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_569B8719E376]
 
Ablation of glucokinase-expressing tanycytes impacts energy balance and increases adiposity in mice.
Rohrbach A., Caron E., Dali R., Brunner M., Pasquettaz R., Kolotuev I., Santoni F., Thorens B., Langlet F., 2021/11. Molecular metabolism, 53 p. 101311. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_FB786377EBF6]
Whole-body integration of gene expression and single-cell morphology.
Vergara H.M., Pape C., Meechan K.I., Zinchenko V., Genoud C., Wanner A.A., Mutemi K.N., Titze B., Templin R.M., Bertucci P.Y. et al., 2021/09/02. Cell, 184 (18) pp. 4819-4837.e22. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_771424935863]
 
Hidden cell diversity in Placozoa: ultrastructural insights from Hoilungia hongkongensis.
Romanova D.Y., Varoqueaux F., Daraspe J., Nikitin M.A., Eitel M., Fasshauer D., Moroz L.L., 2021/09. Cell and tissue research, 385 (3) pp. 623-637. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C466BC2969FF]
 
Array Tomography Workflow for the Targeted Acquisition of Volume Information using Scanning Electron Microscopy.
Franke T., Kolotuev I., 2021/07/15. Journal of visualized experiments 173. Peer-reviewed.
[DOI][Pmid][serval:BIB_5750EB83FE03]
 
ABCG transporters export cutin precursors for the formation of the plant cuticle.
Elejalde-Palmett C., Martinez San Segundo I., Garroum I., Charrier L., De Bellis D., Mucciolo A., Guerault A., Liu J., Zeisler-Diehl V., Aharoni A. et al., 2021/05/24. Current biology, 31 (10) pp. 2111-2123.e9. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A0C9DE51164A]
GDSL-domain proteins have key roles in suberin polymerization and degradation.
Ursache R., De Jesus Vieira Teixeira C., Dénervaud Tendon V., Gully K., De Bellis D., Schmid-Siegert E., Grube Andersen T., Shekhar V., Calderon S., Pradervand S. et al., 2021/03. Nature plants, 7 (3) pp. 353-364. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_30FC7AE0DD86]
PHO1 family members transport phosphate from infected nodule cells to bacteroids in Medicago truncatula.
Nguyen NNT, Clua J., Vetal P.V., Vuarambon D.J., De Bellis D., Pervent M., Lepetit M., Udvardi M., Valentine A.J., Poirier Y., 2021/02/25. Plant physiology, 185 (1) pp. 196-209. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_A26C81C4062D]
 
Extrasynaptic acetylcholine signaling through a muscarinic receptor regulates cell migration.
Kato M., Kolotuev I., Cunha A., Gharib S., Sternberg P.W., 2021/01/05. Proceedings of the National Academy of Sciences of the United States of America, 118 (1) pp. e1904338118. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_34CE97731E71]
Trafficking Processes and Secretion Pathways Underlying the Formation of Plant Cuticles.
Philippe G., De Bellis D., Rose JKC, Nawrath C., 2021. Frontiers in plant science, 12 p. 786874. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6165CD93D0BF]
2020
Genome mapping of a LYST mutation in corn snakes indicates that vertebrate chromatophore vesicles are lysosome-related organelles.
Ullate-Agote A., Burgelin I., Debry A., Langrez C., Montange F., Peraldi R., Daraspe J., Kaessmann H., Milinkovitch M.C., Tzika A.C., 2020/10/20. Proceedings of the National Academy of Sciences of the United States of America, 117 (42) pp. 26307-26317. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3FF790512885]
 
Homeostatic mini-intestines through scaffold-guided organoid morphogenesis.
Nikolaev M., Mitrofanova O., Broguiere N., Geraldo S., Dutta D., Tabata Y., Elci B., Brandenberg N., Kolotuev I., Gjorevski N. et al., 2020/09. Nature, 585 (7826) pp. 574-578. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E75958C4FC02]
SCHENGEN receptor module drives localized ROS production and lignification in plant roots.
Fujita S., De Bellis D., Edel K.H., Köster P., Andersen T.G., Schmid-Siegert E., Dénervaud Tendon V., Pfister A., Marhavý P., Ursache R. et al., 2020/05/04. The EMBO journal, 39 (9) pp. e103894. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_5CA92D11C91C]
 
Tracking the cargo of extracellular symbionts into host tissues with correlated electron microscopy and nanoscale secondary ion mass spectrometry imaging.
Cohen S.K., Aschtgen M.S., Lynch J.B., Koehler S., Chen F., Escrig S., Daraspe J., Ruby E.G., Meibom A., McFall-Ngai M., 2020/04. Cellular microbiology, 22 (4) pp. e13177. Peer-reviewed.
[DOI][Pmid][serval:BIB_F881AD484791]
 
Increased intracellular survival of Salmonella Typhimurium ST313 in HIV-1-infected primary human macrophages is not associated with Salmonella hijacking the HIV compartment.
Lê-Bury G., Deschamps C., Kizilyaprak C., Blanchard W., Daraspe J., Dumas A., Gordon M.A., Hinton JCD, Humbel B.M., Niedergang F., 2020/03. Biology of the cell, 112 (3) pp. 92-101. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C9F8C9219087]
Recruitment of Host Nuclear Pore Components to the Vicinity of Theileria Schizonts.
Huber S., Bär A., Epp S., Schmuckli-Maurer J., Eberhard N., Humbel B.M., Hemphill A., Woods K., 2020/02/05. mSphere, 5 (1) pp. e00709-19. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_50323DA466E1]
2019
 
Deletion of the serine protease CAP2/Tmprss4 leads to dysregulated renal water handling upon dietary potassium depletion.
Keppner A., Maric D., Sergi C., Ansermet C., De Bellis D., Kratschmar D.V., Canonica J., Klusonova P., Fenton R.A., Odermatt A. et al., 2019/12/20. Scientific reports, 9 (1) p. 19540. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_38624B0769FD]
Ferritin heavy chain protects the developing wing from reactive oxygen species and ferroptosis.
Mumbauer S., Pascual J., Kolotuev I., Hamaratoglu F., 2019/09. PLoS genetics, 15 (9) pp. e1008396. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5044E7582001]
 
Volume microscopy in biology: FIB-SEM tomography.
Kizilyaprak C., Stierhof Y.D., Humbel B.M., 2019/04. Tissue & cell, 57 pp. 123-128. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_455EBBECADF8]
 
The Root Cap Cuticle: A Cell Wall Structure for Seedling Establishment and Lateral Root Formation.
Berhin A., de Bellis D., Franke R.B., Buono R.A., Nowack M.K., Nawrath C., 2019/03/07. Cell, 176 (6) pp. 1367-1378.e8. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8D171D2D53B7]
Morphogenesis of neurons and glia within an epithelium.
Low IIC, Williams C.R., Chong M.K., McLachlan I.G., Wierbowski B.M., Kolotuev I., Heiman M.G., 2019/02/20. Development, 146 (4). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_4F2EACE6147B]
Drosophila melanogaster cloak their eggs with pheromones, which prevents cannibalism.
Narasimha S., Nagornov K.O., Menin L., Mucciolo A., Rohwedder A., Humbel B.M., Stevens M., Thum A.S., Tsybin Y.O., Vijendravarma R.K., 2019. PLoS Biology, 17 (1) pp. e2006012. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_BBA74E407B5E]
2018
Comparative genomics and the nature of placozoan species.
Eitel M., Francis W.R., Varoqueaux F., Daraspe J., Osigus H.J., Krebs S., Vargas S., Blum H., Williams G.A., Schierwater B. et al., 2018/07. PLoS biology, 16 (7) pp. e2005359. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_084505C4CC5A]
 
A targeted 3D EM and correlative microscopy method using SEM array tomography.
Burel A., Lavault M.T., Chevalier C., Gnaegi H., Prigent S., Mucciolo A., Dutertre S., Humbel B.M., Guillaudeux T., Kolotuev I., 2018/06/21. Development, 145 (12) p. 1. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8EA453B159CB]
 
Coordination of Septate Junctions Assembly and Completion of Cytokinesis in Proliferative Epithelial Tissues.
Daniel E., Daudé M., Kolotuev I., Charish K., Auld V., Le Borgne R., 2018/05/07. Current biology, 28 (9) pp. 1380-1391.e4. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_14836ACEA68E]
2017
Loss of Extracellular Signal-Regulated Kinase 1/2 in the Retinal Pigment Epithelium Leads to RPE65 Decrease and Retinal Degeneration.
Pyakurel A., Balmer D., Saba-El-Leil M.K., Kizilyaprak C., Daraspe J., Humbel B.M., Voisin L., Le Y.Z., von Lintig J., Meloche S. et al., 2017/12/15. Molecular and cellular biology, 37 (24) pp. e00295-17. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_A339F680887A]
 
Description of Gloeomargarita lithophora gen. nov., sp. nov., a thylakoid-bearing, basal-branching cyanobacterium with intracellular carbonates, and proposal for Gloeomargaritales ord. nov.
Moreira D., Tavera R., Benzerara K., Skouri-Panet F., Couradeau E., Gérard E., Fonta C.L., Novelo E., Zivanovic Y., López-García P., 2017/03. International journal of systematic and evolutionary microbiology, 67 (3) pp. 653-658. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_61BBB2B06489]
Transfer of Anti-Rotavirus Antibodies during Pregnancy and in Milk Following Maternal Vaccination with a Herpes Simplex Virus Type-1 Amplicon Vector.
Meier A.F., Suter M., Schraner E.M., Humbel B.M., Tobler K., Ackermann M., Laimbacher A.S., 2017/02/16. International journal of molecular sciences, 18 (2) p. 0. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_19DB7BD152AF]
 
Automatic segmentation of high pressure frozen and freeze-substituted mouse retina nuclei from FIB-SEM tomograms.
Hoang T.V., Kizilyaprak C., Spehner D., Humbel B.M., Schultz P., 2017/02. Journal of structural biology, 197 (2) pp. 123-134. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DF3470F043D1]
 
Transient cell-specific EXO70A1 activity in the CASP domain and Casparian strip localization.
Kalmbach L., Hématy K., De Bellis D., Barberon M., Fujita S., Ursache R., Daraspe J., Geldner N., 2017. Nature Plants, 3 p. 17058. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_177FB6C32482]
2016
 
Cuticular Defects in Oryza sativa ATP-binding Cassette Transporter G31 Mutant Plants Cause Dwarfism, Elevated Defense Responses and Pathogen Resistance.
Garroum I., Bidzinski P., Daraspe J., Mucciolo A., Humbel B.M., Morel J.B., Nawrath C., 2016/04. Plant & cell physiology, 57 (6) pp. 1179-1188. Peer-reviewed.
[DOI][Pmid][serval:BIB_2C852EFA401D]
 
Adaptation of Root Function by Nutrient-Induced Plasticity of Endodermal Differentiation.
Barberon M., Vermeer J.E., De Bellis D., Wang P., Naseer S., Andersen T.G., Humbel B.M., Nawrath C., Takano J., Salt D.E. et al., 2016. Cell, 164 (3) pp. 447-459.
[DOI][WoS][Pmid][serval:BIB_F87F4DEBD1B4]
 
The ABCG transporter PEC1/ABCG32 is required for the formation of the developing leaf cuticle in Arabidopsis.
Fabre G., Garroum I., Mazurek S., Daraspe J., Mucciolo A., Sankar M., Humbel B.M., Nawrath C., 2016. New Phytologist, 209 (1) pp. 192-201.
[DOI][WoS][Pmid][serval:BIB_977630E5016E]
2015
 
Drosophila E-cadherin is required for the maintenance of ring canals anchoring to mechanically withstand tissue growth.
Loyer N., Kolotuev I., Pinot M., Le Borgne R., 2015/10/13. Proceedings of the National Academy of Sciences of the United States of America, 112 (41) pp. 12717-12722. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0E440810BCC7]
 
Adaptation of Cryo-Sectioning for IEM Labeling of Asymmetric Samples: A Study Using Caenorhabditis elegans.
Nicolle O., Burel A., Griffiths G., Michaux G., Kolotuev I., 2015/08. Traffic, 16 (8) pp. 893-905. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7CFC4491A38F]
 
Characterization of the microstructure of dairy systems using automated image analysis
Silva Juliana V.C., Legland David, Cauty Chantal, Kolotuev Irina, Floury Juliane, 2015/02. Food Hydrocolloids, 44 pp. 360-371.
[DOI][WoS][serval:BIB_3E475992A60A]
Analysis of acute brain slices by electron microscopy: A correlative light-electron microscopy workflow based on Tokuyasu cryo-sectioning.
Loussert Fonta C., Leis A., Mathisen C., Bouvier D.S., Blanchard W., Volterra A., Lich B., Humbel B.M., 2015. Journal of Structural Biology, 189 (1) pp. 53-61. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_7CA6BAFBE7CE]
 
Correlative microscopy.
Loussert Fonta C., Humbel B.M., 2015. Archives of Biochemistry and Biophysics, 581 pp. 98-110.
[DOI][WoS][Pmid][serval:BIB_DFBB99A4F7E7]
 
Imaging liver and brain glycogen metabolism at the nanometer scale.
Takado Y., Knott G., Humbel B.M., Escrig S., Masoodi M., Meibom A., Comment A., 2015. Nanomedicine, 11 (1) pp. 239-245. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0D806AC07C94]
 
Imaging the time-integrated cerebral metabolic activity with subcellular resolution through nanometer-scale detection of biosynthetic products deriving from (13)C-glucose.
Takado Y., Knott G., Humbel B.M., Masoodi M., Escrig S., Meibom A., Comment A., 2015. Journal of Chemical Neuroanatomy, 69 pp. 7-12.
[DOI][WoS][Pmid][serval:BIB_1BF2C90C520B]
 
Investigation of resins suitable for the preparation of biological sample for 3-D electron microscopy.
Kizilyaprak C., Longo G., Daraspe J., Humbel B.M., 2015. Journal of Structural Biology, 189 (2) pp. 135-146. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_EDCB3874D5CA]
Subcellular investigation of photosynthesis-driven carbon assimilation in the symbiotic reef coral Pocillopora damicornis.
Kopp C., Domart-Coulon I., Escrig S., Humbel B.M., Hignette M., Meibom A., 2015. Mbio, 6 (1) pp. e02299-14. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_09FA7B6EAAB3]
2014
 
Positional Correlative Anatomy of Invertebrate Model Organisms Increases Efficiency of TEM Data Production
Kolotuev Irina, 2014/10. Microscopy and Microanalysis, 20 (5) pp. 1392-1403.
[DOI][WoS][Pmid][serval:BIB_4A98E0DD30CC]
 
Correlative light and electron microscopy using immunolabeled sections.
Schwarz H., Humbel B.M., 2014. Methods In Molecular Biology, 1117 pp. 559-592. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_13EC9D76BF73]
 
FIB-SEM tomography in biology.
Kizilyaprak C., Bittermann A.G., Daraspe J., Humbel B.M., 2014. Methods In Molecular Biology, 1117 pp. 541-558. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_5D201429E8A2]
 
Focused ion beam scanning electron microscopy in biology.
Kizilyaprak C., Daraspe J., Humbel B.M., 2014. Journal of Microscopy, 254 (3) pp. 109-114. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_86CED6A78D88]
2013
 
A pathway for unicellular tube extension depending on the lymphatic vessel determinant Prox1 and on osmoregulation.
Kolotuev I, Hyenne V, Schwab Y, Rodriguez D, Labouesse M, 2013/02. Nat. Cell Biol..
[DOI][Pmid][serval:BIB_13395F13F467]
 
Electron microscopy: classical sample preparation
Humbel B.M., 2013. pp. 646-648 dans Roberts G.C.K. (eds.) Encyclopedia of Biophysics, Springer Verlag.
[DOI][serval:BIB_597CEBA32AFE]
 
Electron microscopy: cryo-preparation
Humbel B.M., 2013. pp. 596-600 dans Roberts G.C.K. (eds.) Encyclopedia of Biophysics, Springer Verlang.
[DOI][serval:BIB_2FB53737A759]
Skeletal muscle mitochondrial and lipid droplet content assessed with standardized grid sizes for stereology.
Broskey N.T., Daraspe J., Humbel B.M., Amati F., 2013. Journal of Applied Physiology, 115 (5) pp. 765-770.
[URN][DOI][WoS][Pmid][serval:BIB_AED88FEEECF0]
 
Transmission Fourier transform infrared microspectroscopy allows simultaneous assessment of cutin and cell-wall polysaccharides of Arabidopsis petals.
Mazurek S., Mucciolo A., Humbel B.M., Nawrath C., 2013. Plant Journal, 74 (5) pp. 880-891.
[DOI][WoS][Pmid][serval:BIB_694F2BA3CB1B]
2012
 
Correlative light and electron microscopy in parasite research.
Loussert C., Forestier C.L., Humbel B.M., 2012. pp. 59-73 dans Correlative Light and Electron MIcroscopy, Elsevier.
[DOI][WoS][Pmid][serval:BIB_78BCCB84A6B3]
 
Optimizing immuno-labeling for correlative fluorescence and electron microscopy on a single specimen.
Karreman M.A., Agronskaia A.V., van Donselaar E.G., Vocking K., Fereidouni F., Humbel B.M., Verrips C.T., Verkleij A.J., Gerritsen H.C., 2012. Journal of Structural Biology, 180 (2) pp. 382-386. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E9B9A8E17D3A]
 
Skeletal Muscle Mitochondrial and Lipid Droplet Volume Density: Validity of Electron Microscopy Point-counting Measurements
Broskey N.T., Daraspe J., Humbel B.M., Amati F., 2012. p. 688 dans American College of Sports Medicine 59th Annual Meeting and 3rd World Congress on Exercise is Medicine, Medicine and Science in Sports and Exercise.
[serval:BIB_0CF78F60AE9B]
 
Targeted ultramicrotomy: a valuable tool for correlated light and electron microscopy of small model organisms.
Kolotuev I., Bumbarger D.J., Labouesse M., Schwab Y., 2012. pp. 203-222 dans Correlative Light and Electron MIcroscopy, Elsevier.
[DOI][WoS][Pmid][serval:BIB_3C184DD70E7E]
2010
Extracellular matrix formation after transplantation of human embryonic stem cell-derived cardiomyocytes.
van Laake L.W., van Donselaar E.G., Monshouwer-Kloots J., Schreurs C., Passier R., Humbel B.M., Doevendans P.A., Sonnenberg A., Verkleij A.J., Mummery C.L., 2010. Cellular and Molecular Life Sciences, 67 (2) pp. 277-290.
[URN][DOI][WoS][Pmid][serval:BIB_612862AD37D1]
 
The making of frozen-hydrated, vitreous lamellas from cells for cryo-electron microscopy.
Hayles M.F., de Winter D.A., Schneijdenberg C.T., Meeldijk J.D., Luecken U., Persoon H., de Water J., de Jong F., Humbel B.M., Verkleij A.J., 2010. Journal of Structural Biology, 172 (2) pp. 180-190.
[DOI][WoS][Pmid][serval:BIB_C9D2C7C09AB2]
2009
 
A precise and rapid mapping protocol for correlative light and electron microscopy of small invertebrate organisms.
Kolotuev I., Schwab Y., Labouesse M., 2009/12/04. Biology of the cell, 102 (2) pp. 121-132. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_85ADE48FB950]
 
Revealing the high-resolution three-dimensional network of chromatin and interchromatin space: A novel electron-microscopic approach to reconstructing nuclear architecture
Rouquette Jacques, Genoud Christel, Vazquez-Nin Gerardo H., Kraus Bernd, Cremer Thomas, Fakan Stanislav, 2009/08. Chromosome Research, 17 (6) pp. 801-810. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F8AB3CD2B0A7]
 
Secretion of Hedgehog-related peptides and WNT during Caenorhabditis elegans development.
Kolotuev I., Apaydin A., Labouesse M., 2009/07. Traffic, 10 (7) pp. 803-810. Peer-reviewed.
[DOI][Pmid][serval:BIB_1987FFFB6650]
2008
 
Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ.
Eltsov M., Maclellan K.M., Maeshima K., Frangakis A.S., Dubochet J., 2008/12/16. Proceedings of the National Academy of Sciences of the United States of America, 105 (50) pp. 19732-19737. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7181F84A2278]
 
Changing of the cell division axes drives vulva evolution in nematodes
Kolotuev Irina, Podbilewicz Benjamin, 2008/01. Developmental Biology, 313 (1) pp. 142-154.
[DOI][WoS][Pmid][serval:BIB_6AA484D1626A]
2007
 
Trends, stasis, and drift in the evolution of nematode vulva development.
Kiontke K., Barrière A., Kolotuev I., Podbilewicz B., Sommer R., Fitch D.H., Félix M.A., 2007/11/20. Current biology, 17 (22) pp. 1925-1937. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9A03B7E638B8]
 
Muscle-epidermis interactions affect exoskeleton patterning in Caenorhabditis elegans.
Broday L., Hauser C.A., Kolotuev I., Ronai Z., 2007/11. Developmental dynamics, 236 (11) pp. 3129-3136. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_FE57A21429D7]
2006
Plasticity of astrocytic coverage and glutamate transporter expression in adult mouse cortex.
Genoud C., Quairiaux C., Steiner P., Hirling H., Welker E., Knott G.W., 2006. PLoS Biology, 4 (11) pp. e343. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_46FC2E9872FF]
2004
The small ubiquitin-like modifier (SUMO) is required for gonadal and uterine-vulval morphogenesis in Caenorhabditis elegans.
Broday L., Kolotuev I., Didier C., Bhoumik A., Gupta B.P., Sternberg P.W., Podbilewicz B., Ronai Z., 2004/10/01. Genes & development, 18 (19) pp. 2380-2391. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B443F1699DDC]
 
EFF-1 is sufficient to initiate and execute tissue-specific cell fusion in C. elegans.
Shemer G., Suissa M., Kolotuev I., Nguyen K.C., Hall D.H., Podbilewicz B., 2004/09/07. Current biology, 14 (17) pp. 1587-1591. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C8D799094050]
 
The LIM domain protein UNC-95 is required for the assembly of muscle attachment structures and is regulated by the RING finger protein RNF-5 in C. elegans.
Broday L., Kolotuev I., Didier C., Bhoumik A., Podbilewicz B., Ronai Z., 2004/06/21. The Journal of cell biology, 165 (6) pp. 857-867. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0DC4006BBC8B]
 
Pristionchus pacificus vulva formation: polarized division, cell migration, cell fusion, and evolution of invagination.
Kolotuev I., Podbilewicz B., 2004/02/15. Developmental biology, 266 (2) pp. 322-333. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_570A1B01C02C]
2003
 
Control of vulval competence and centering in the nematode Oscheius sp. 1 CEW1.
Louvet-Vallée S., Kolotuev I., Podbilewicz B., Félix M.A., 2003/01. Genetics, 163 (1) pp. 133-146. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E221BEE52628]
1998
 
The reaction centre of the photounit of Rhodospirillum rubrum is anchored to the light-harvesting complex with four-fold rotational disorder
Stahlberg Henning, Dubochet Jacques, Vogel Horst, Ghosh Robin, 1998. Photosynthesis Research, 55 (2/3) pp. 363-368. Peer-reviewed.
[DOI][WoS][serval:BIB_E08D32D4C80B]
1996
 
Sulphur-bearing lipids for the covalent attachment of supported lipid bilayers to gold surfaces: a detailed characterisation and analysis
Duschl Claus, Liley Martha, Lang Holger, Ghandi Azin, Zakeeruddin Shaik M., Stahlberg Henning, Dubochet Jacques, Nemetz Axel, Knoll Wolfgang, Vogel Horst, 1996/03. Materials Science and Engineering: C, 4 (1) pp. 7-18.
[DOI][WoS][serval:BIB_3332D79D298F]
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