Department of Ecology and Evolution

Groupe Bertelsmeier | Groupe Chapuisat | Groupe Christe | Groupe Fumagalli | Groupe Goudet | Groupe Guisan | Groupe Kawecki | Groupe Lehmann | Groupe Mullon | Groupe Pannell | Groupe Robinson-Rechavi | Groupe Roulin | Groupe Sanders | Groupe Schwander | Groupe Van de Waal | Groupe Wedekind
Publications | Phd and Masters theses

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3974 publications

... | 2023 | 2022 | ...
Differential resistance across paternal genotypes of honey bee brood to the pathogenic bacterium <i>Melissococcus plutonius</i>
Ameline Camille, Beaurepaire Alexis, Ory Florine, de La Harpe Marylaure, Dainat Benjamin, Dietemann Vincent, 2023/02. Journal of Applied Entomology, 147 (1) pp. 85-93.
Genomic signatures underlying the oogenesis of the ectoparasitic mite Varroa destructor on its new host Apis mellifera.
Zheng H., Wang S., Wu Y., Zou S., Dietemann V., Neumann P., Chen Y., Li-Byarlay H., Pirk C., Evans J. et al., 2023/02. Journal of advanced research, 44 pp. 1-11. Peer-reviewed.
 
Habitat fragmentation matters more than habitat loss: The case of host-parasite interactions.
Perrin A., Khimoun A., Ollivier A., Richard Y., Pérez-Rodríguez A., Faivre B., Garnier S., 2023/02. Molecular ecology, 32 (4) pp. 951-969. Peer-reviewed.
How genomics can help biodiversity conservation
Theissinger Kathrin, Fernandes Carlos, Formenti Giulio, Bista Iliana, Berg Paul R., Bleidorn Christoph, Bombarely Aureliano, Crottini Angelica, Gallo Guido R., Godoy José A. et al., 2023/02. Trends in Genetics. Peer-reviewed.
 
Landscape-scale habitat fragmentation is positively related to biodiversity, despite patch-scale ecosystem decay.
Riva F., Fahrig L., 2023/02. Ecology letters, 26 (2) pp. 268-277. Peer-reviewed.
The Alarm Pheromone and Alarm Response of the Clonal Raider Ant.
Lopes L.E., Frank E.T., Kárpáti Z., Schmitt T., Kronauer DJC, 2023/02. Journal of chemical ecology, 49 (1-2) pp. 1-10. Peer-reviewed.
What Ecological Factors Favor Parthenogenesis over Sexual Reproduction? A Study on the Facultatively Parthenogenetic Mayfly <i>Alainites muticus</i> in Natural Populations
Liegeois Maud, Sartori Michel, Schwander Tanja, 2023/02/01. The American Naturalist, 201 (2) pp. 229-240. Peer-reviewed.
 
Environmental and fitness landscapes matter for the genetic basis of local adaptation
Charles Mullon, 2023/01/23. Peer Community in Evolutionary Biology.
 
Genome-wide DNA methylation predicts environmentally driven life history variation in a marine fish.
Venney C.J., Cayuela H., Rougeux C., Laporte M., Mérot C., Normandeau E., Leitwein M., Dorant Y., Præbel K., Kenchington E. et al., 2023/01/23. Evolution; international journal of organic evolution, 77 (1) pp. 186-198. Peer-reviewed.
 
Characterization of the sex determining region of channel catfish (Ictalurus punctatus) and development of a sex-genotyping test.
Wen M., Pan Q., Larson W., Eché C., Guiguen Y., 2023/01/20. Gene, 850 p. 146933. Peer-reviewed.
 
A tale of three vines: current and future threats to wild Eurasian grapevine by vineyards and invasive rootstocks
Petitpierre B., Arnold C., Phelps L.N., Guisan A., 2023. Diversity and Distributions, 29 (12) pp. 1594-1608. Peer-reviewed.
Bone-related behaviours of captive chimpanzees (Pan troglodytes) during two excavating experiments.
Motes-Rodrigo A., Tennie C., Hernandez-Aguilar R.A., 2023/01. Primates; journal of primatology, 64 (1) pp. 35-46. Peer-reviewed.
Developing species distribution models for critically endangered species using participatory data: The European sturgeon marine habitat suitability
Charbonnel Anaïs, Lambert Patrick, Lassalle Géraldine, Quinton Eric, Guisan Antoine, Mas Lise, Paquignon Guillaume, Lecomte Marie, Acolas Marie-Laure, 2023/01. Estuarine, Coastal and Shelf Science, 280 p. 108136. Peer-reviewed.
 
Development of Ovaries and Sex Change in Fish: Bringing Potential into Action.
Adolfi M.C., Depincé A., Wen M., Pan Q., Herpin A., 2023. Sexual development, 17 (2-3) pp. 84-98. Peer-reviewed.
 
Disentangling the roles of chance, abiotic factors and biotic interactions among epiphytic bryophyte communities in a tropical rainforest (Yunnan, China)
Shen T., Song L., Corlett R. T., Guisan A., Wang J., Ma W.-Z., Mouton L., Vanderpoorten A., Collart F., 2023. Plant Biology, 25 (6) pp. 880-891. Peer-reviewed.
Dominant plant species play an important role in regulating bacterial antagonism in terrestrial Antarctica.
Naz B., Liu Z., Malard L.A., Ali I., Song H., Wang Y., Li X., Usman M., Ali I., Liu K. et al., 2023. Frontiers in microbiology, 14 p. 1130321. Peer-reviewed.
 
DrosOMA: the Drosophila Orthologous Matrix browser.
Thiébaut A., Altenhoff A.M., Campli G., Glover N., Dessimoz C., Waterhouse R.M., 2023. F1000Research, 12 p. 936. Peer-reviewed.
Evidence of phylosymbiosis in Formica ants.
Jackson R., Patapiou P.A., Golding G., Helanterä H., Economou C.K., Chapuisat M., Henry L.M., 2023. Frontiers in microbiology, 14 p. 1044286. Peer-reviewed.
Evolution of semi-Kantian preferences in two-player assortative interactions with complete and incomplete information and plasticity
Alger I., Lehmann L., 2023. Dynamic Games and Applications. Peer-reviewed.
Evolution: A social parasite was born from a virgin
Chapuisat Michel, 2023. Current Biology, 33 (6) pp. R225-R228.
Exploring the future of GM technology in sustainable local food systems in Colombia.
Cárdenas Pardo N.J., Rodriguez Robayo D.E., Fernandez Lizarazo J.C., Peña-Quemba D.C., McGale E., 2023. Frontiers in genome editing, 5 p. 1181811. Peer-reviewed.
Factors affecting the availability of data on East African wildlife: the monitoring needs of conservationists are not being met
Moreno I., Gippet J.M.W., Fumagalli L., Stephenson P. J., 2023/01. Biodiversity and Conservation, 32 (1) pp. 249-273. Peer-reviewed.
 
First record of an albino Discoglossus galganoi Capula et al., 1985 with pigmented nuptial pads and lower jaw spines
Gloor Robin, Dubey Sylvain, 2023. Herpetology Notes, 16 pp. 285-287. Peer-reviewed.
Inferring genetic structure when there is little: population genetics versus genomics of the threatened bat Miniopterus schreibersii across Europe
Dufresnes Christophe, Dutoit Ludovic, Brelsford Alan, Goldstein-Witsenburg Fardo, Clément Laura, López-Baucells Adria, Palmeirim Jorge, Pavlinić Igor, Scaravelli Dino, Ševčík Martin et al., 2023/01. Scientific Reports, 13 (1) p. 1523. Peer-reviewed.
 
Inferring the Demographic History and Inheritance Mode of Tetraploid Species Using ABC
Roux Camille, Vekemans Xavier, Pannell John, 2023. pp. 325-348 dans Polyploidy, Springer US.
Life history and deleterious mutation rate coevolution
Avila P., Lehmann L., 2023. Journal of Theoretical Biology. Peer-reviewed.
 
Modelling invasion by wattles: challenges and applications
Vicente J.R., Pinto E., Guisan A., Kueffer C., Marchante E., Kühn I., Cabral J.A., Gonçalves J., Honrado J.P., Alonso J. et al., 2023. dans Acacia Invasions, Richardson, D..
N‐SDM: a high‐performance computing pipeline for Nested Species Distribution Modelling
Adde Antoine, Rey Pierre-Louis, Brun Philipp, Külling Nathan, Fopp Fabian, Altermatt Florian, Broennimann Olivier, Lehmann Anthony, Petitpierre Blaise, Zimmermann Niklaus E. et al., 2023. Ecography, 2023 (6) pp. e06540. Peer-reviewed.
Pathways to Success: Taking Conservation to Scale in Complex Systems by Nick Salafsky and Richard Margoluis (2021) 305 pp., Island Press, Washington, DC, USA. ISBN 978-1-64283-135-1 (pbk), USD 31.00.
Stephenson P.J., 2023/01. Oryx, 57 (1) pp. 134-134.
Population genetic diversity and dynamics of the honey bee brood pathogen Melissococcus plutonius in a region with high prevalence.
Grossar D., Haynes E., Budge G.E., Parejo M., Gauthier L., Charrière J.D., Chapuisat M., Dietemann V., 2023. Journal of invertebrate pathology, 196 p. 107867. Peer-reviewed.
Relative effects of urbanisation, deforestation, and agricultural development on mosquito communities.
Perrin A., Schaffner F., Christe P., Glaizot O., 2023. Landscape ecology, 38 (6) pp. 1527-1536. Peer-reviewed.
Supergenes as drivers of ant evolution
Chapuisat M., 2023. Myrmecological News, 33 pp. 1-18. Peer-reviewed.
 
The dataset of bat (Mammalia, Chiroptera) occurrences in Ukraine collected by the Ukrainian Bat Rehabilitation Center (2011-2022).
Prylutska A., Yerofeieva M., Bohodist V., Shulenko A., But A., Kravchenko K., Prylutskyi O., Vlaschenko A., 2023. Biodiversity data journal, 11 pp. e99243. Peer-reviewed.
Too many candidates: Embedded covariate selection procedure for species distribution modelling with the covsel R package
Adde Antoine, Rey Pierre-Louis, Fopp Fabian, Petitpierre Blaise, Schweiger Anna K., Broennimann Olivier, Lehmann Anthony, Zimmermann Niklaus E., Altermatt Florian, Pellissier Loïc et al., 2023. Ecological Informatics, 75 p. 102080. Peer-reviewed.
 
Variable rate of ageing within species: insights from Darwin's frogs
Valenzuela-Sánchez Andrés, Schmidt Benedikt R, Azat Claudio, Delgado Soledad, Cunningham Andrew A, Lemaître Jean-François, Gaillard Jean-Michel, Cayuela Hugo, 2023/01/01. Biological Journal of the Linnean Society, 138 (1) pp. 68-74.
 
A new, widespread genus of Baetidae from South Asia (Insecta, Ephemeroptera).
Kaltenbach T., Kluge N.J., Gattolliat J.L., 2023. ZooKeys, 1168 pp. 231-266. Peer-reviewed.
Another new species of the genus Habrophlebia Eaton, 1881 (Ephemeroptera, Leptophlebiidae) from the Maghreb.
El Alami M., Vuataz L., El Yaagoubi S., Sartori M., 2023. ZooKeys, 1186 pp. 47-70. Peer-reviewed.
Baetidae (Baetidae, Ephemeroptera) in the Maghreb: state of the art, key, and perspectives.
Gattolliat J.L., Samraoui B., Benhadji N., Kechemir L., Zrelli S., El Yaagoubi S., El Moutaouakil MEA, Sartori M., 2023/01. ZooKeys, 1139 pp. 137-163. Peer-reviewed.
Big diversity in a small hotspot: two new species of Leptophlebiidae (Insecta, Ephemeroptera) from New Caledonia.
Hrivniak Ľ., Sartori M., Sroka P., Bojková J., 2023/01. ZooKeys, 1143 pp. 71-88. Peer-reviewed.
Hamilton's rule, the evolution of behavior rules and the wizardry of control theory.
Lehmann L., 2022/12/21. Journal of theoretical biology, 555 p. 111282. Peer-reviewed.
La faune de la zone centrale du Parc naturel périurbain du Jorat détectée par pièges photographiques l’année de sa création
Moreno Inès, Christe Philippe, 2022/12/15. Bulletin de la Société Vaudoise des Sciences Naturelles. Peer-reviewed.
Author Correction: Adult sex ratios: causes of variation and implications for animal and human societies.
Schacht R., Beissinger S.R., Wedekind C., Jennions M.D., Geffroy B., Liker A., Kappeler P.M., Weissing F.J., Kramer K.L., Hesketh T. et al., 2022/12/07..
The restart effect in social dilemmas shows humans are self-interested not altruistic.
Burton-Chellew M.N., 2022/12/06. Proceedings of the National Academy of Sciences of the United States of America, 119 (49) pp. e2210082119. Peer-reviewed.
 
Integrating plant and fungal quantitative genetics to improve the ecological and agricultural applications of mycorrhizal symbioses.
McGale E., Sanders I.R., 2022/12. Current opinion in microbiology, 70 p. 102205. Peer-reviewed.
 
Loss of the world's smallest forests.
Riva F., Martin C.J., Millard K., Fahrig L., 2022/12. Global change biology, 28 (24) pp. 7164-7166. Peer-reviewed.
Worldwide impacts of landscape anthropization on mosquito abundance and diversity: A meta-analysis.
Perrin A., Glaizot O., Christe P., 2022/12. Global change biology, 28 (23) pp. 6857-6871. Peer-reviewed.
X chromosomes show relaxed selection and complete somatic dosage compensation across Timema stick insect species.
Parker D.J., Jaron K.S., Dumas Z., Robinson-Rechavi M., Schwander T., 2022/12. Journal of evolutionary biology, 35 (12) pp. 1734-1750. Peer-reviewed.
What makes a good phorophyte? Predicting occupancy, species richness and abundance of vascular epiphytes in a lowland seasonal tropical forest
Shen Ting, Song Liang, Collart Flavien, Guisan Antoine, Su Yang, Hu Hai-Xia, Wu Yi, Dong Jin-Long, Vanderpoorten Alain, 2022/11/25. Frontiers in Forests and Global Change, 5. Peer-reviewed.
Adult sex ratios: causes of variation and implications for animal and human societies.
Schacht R., Beissinger S.R., Wedekind C., Jennions M.D., Geffroy B., Liker A., Kappeler P.M., Weissing F.J., Kramer K.L., Hesketh T. et al., 2022/11/19. Communications Biology, 5 (1) p. 1273. Peer-reviewed.
Parallel evolution of amphioxus and vertebrate small-scale gene duplications.
Brasó-Vives M., Marlétaz F., Echchiki A., Mantica F., Acemel R.D., Gómez-Skarmeta J.L., Hartasánchez D.A., Le Targa L., Pontarotti P., Tena J.J. et al., 2022/11/18. Genome biology, 23 (1) p. 243. Peer-reviewed.
 
Two simple movement mechanisms for spatial division of labour in social insects.
Richardson T.O., Stroeymeyt N., Crespi A., Keller L., 2022/11/15. Nature communications, 13 (1) p. 6985. Peer-reviewed.
Transformative Change Needs Direction
Jacobs Sander, Santos-Martín Fernando, Primmer Eeva, Boeraeve Fanny, Morán-Ordóñez Alejandra, Proença Vânia, Schlaepfer Martin, Brotons Lluis, Dunford Robert, Lavorel Sandra et al., 2022/11/10. Sustainability, 14 (22) p. 14844. Peer-reviewed.
Natural alleles at the Doa locus underpin evolutionary changes in Drosophila lifespan and fecundity.
Hoedjes K.M., Kostic H., Keller L., Flatt T., 2022/11/09. Proceedings. Biological sciences, 289 (1986) p. 20221989. Peer-reviewed.
Asymmetric Inheritance: The Diversity and Evolution of Non-Mendelian Reproductive Strategies
Ross Laura, Mongue Andrew J., Hodson Christina N., Schwander Tanja, 2022/11/02. Annual Review of Ecology, Evolution, and Systematics, 53 (1) pp. 1-23. Peer-reviewed.
 
A complete absence of indirect genetic effects on brain gene expression in a highly social context.
Kay T., Alciatore G., La Mendola C., Reuter M., Ulrich Y., Keller L., 2022/11. Molecular ecology, 31 (21) pp. 5602-5607. Peer-reviewed.
 
Aerobiology over the Southern Ocean - Implications for bacterial colonization of Antarctica.
Malard L.A., Avila-Jimenez M.L., Schmale J., Cuthbertson L., Cockerton L., Pearce D.A., 2022/11. Environment international, 169 p. 107492. Peer-reviewed.
 
Disruptive selection via pollinators and seed predators on the height of flowers on a wind-dispersed alpine herb.
Chen K.H., Pannell J.R., 2022/11. American journal of botany, 109 (11) pp. 1717-1729. Peer-reviewed.
Genomic basis of insularity and ecological divergence in barn owls (Tyto alba) of the Canary Islands.
Cumer T., Machado A.P., Siverio F., Cherkaoui S.I., Roque I., Lourenço R., Charter M., Roulin A., Goudet J., 2022/11. Heredity, 129 (5) pp. 281-294. Peer-reviewed.
 
Hierarchical phylogenetic community assembly of soil protists in a temperate agricultural field.
Roy J., Mazel F., Dumack K., Bonkowski M., Rillig M.C., 2022/11. Environmental microbiology, 24 (11) pp. 5498-5508. Peer-reviewed.
 
More losses than gains during one century of plant biodiversity change in Germany.
Jandt U., Bruelheide H., Jansen F., Bonn A., Grescho V., Klenke R.A., Sabatini F.M., Bernhardt-Römermann M., Blüml V., Dengler J. et al., 2022/11. Nature, 611 (7936) pp. 512-518. Peer-reviewed.
 
Protection gaps in Amazon floodplains will increase with climate change: Insight from the world's largest scaled freshwater fish
Dubos Nicolas, Lenormand Maxime, Castello Leandro, Oberdorff Thierry, Guisan Antoine, Luque Sandra, 2022/11. Aquatic Conservation: Marine and Freshwater Ecosystems, 32 (11) pp. 1830-1841. Peer-reviewed.
Reducing the bias due to unknown relationships in measuring the steepness of a dominance hierarchy
Saccà Tommaso, Gort Gerrit, van de Waal Erica, Hemelrijk Charlotte K., 2022/11. Animal Behaviour, 193 pp. 125-131. Peer-reviewed.
The Strategy Method Risks Conflating Confusion with a Social Preference for Conditional Cooperation in Public Goods Games
Burton-Chellew Maxwell N., D'Amico Victoire, Guérin Claire, 2022/10/25. Games, 13 (6) p. 69. Peer-reviewed.
 
Rapid evolution of pollen and pistil traits as a response to sexual selection in the post-pollination phase of mating.
Tonnabel J., Cosette P., Lehner A., Mollet J.C., Amine Ben Mlouka M., Grladinovic L., David P., Pannell J.R., 2022/10/24. Current biology, 32 (20) pp. 4465-4472.e6. Peer-reviewed.
 
Microclimatic variation in tropical canopies: A glimpse into the processes of community assembly in epiphytic bryophyte communities
Shen Ting, Corlett Richard T., Collart Flavien, Kasprzyk Thibault, Guo Xin-Lei, Patiño Jairo, Su Yang, Hardy Olivier J., Ma Wen-Zhang, Wang Jian et al., 2022/10/22. Journal of Ecology. Peer-reviewed.
People's knowledge and perceptions of Trachycarpus fortunei (Chinese windmill palm) invasions and their management in Ticino, Switzerland
Genazzi Micol, Guisan Antoine, Shackleton Ross T., 2022/10/06. Geographica Helvetica, 77 (4) pp. 443-453. Peer-reviewed.
 
A genome-wide analysis suggests pleiotropic effects of Green Revolution genes on shade avoidance in wheat.
Colombo M., Montazeaud G., Viader V., Ecarnot M., Prosperi J.M., David J., Fort F., Violle C., Fréville H., 2022/10. Evolutionary applications, 15 (10) pp. 1594-1604. Peer-reviewed.
Captive great apes tend to innovate simple tool behaviors quickly.
Motes-Rodrigo A., Tennie C., 2022/10. American journal of primatology, 84 (10) pp. e23311. Peer-reviewed.
Detecting preservation and reintroduction sites for endangered plant species using a two‐step modeling and field approach
Rusconi O., Broennimann O., Storrer Y., Le Bayon RC, Guisan A., Rasmann S., 2022/10. Conservation Science and Practice, 4 (10). Peer-reviewed.
Effects of free-ranging livestock on occurrence and interspecific interactions of a mammalian community.
Salvatori M., Oberosler V., Augugliaro C., Krofel M., Rovero F., 2022/10. Ecological applications, 32 (7) pp. e2644. Peer-reviewed.
Focal vs. fecal: Seasonal variation in the diet of wild vervet monkeys from observational and DNA metabarcoding data.
Brun L., Schneider J., Carrió E.M., Dongre P., Taberlet P., Van de Waal E., Fumagalli L., 2022/10. Ecology and Evolution, 12 (10) pp. e9358. Peer-reviewed.
Intentional gestural communication amongst red-capped mangabeys (Cercocebus torquatus).
Schel A.M., Bono A., Aychet J., Pika S., Lemasson A., 2022/10. Animal cognition, 25 (5) pp. 1313-1330. Peer-reviewed.
 
Mapping habitats sensitive to overgrazing in the Swiss Northern Alps using habitat suitability modeling
Fragnière Yann, Gremaud Jérôme, Pesenti Elias, Bétrisey Sébastien, Petitpierre Blaise, Guisan Antoine, Kozlowski Gregor, 2022/10. Biological Conservation, 274 p. 109742. Peer-reviewed.
 
Ophiodimyces ophiodiicola, Etiologic Agent of Snake Fungal Disease, in Europe since Late 1950s.
Origgi F.C., Pisano SRR, Glaizot O., Hertwig S.T., Schmitz A., Ursenbacher S., 2022/10. Emerging infectious diseases, 28 (10) pp. 2064-2068. Peer-reviewed.
Persistent high hatchery recruitment despite advanced reoligotrophication and significant natural spawning in a whitefish
Wedekind Claus, Vonlanthen Pascal, de Guttry Christian, Stadelmann Richard, Stadelmann Noah, Pirat Aurélien, Perroud Giulia, 2022/10. Global Ecology and Conservation, 38 pp. e02219. Peer-reviewed.
Polyctenidae (Hemiptera: Cimicoidea) species in the Afrotropical region: Distribution, host specificity, and first insights to their molecular phylogeny.
Szentiványi T., Hornok S., Kovács Á.B., Takács N., Gyuranecz M., Markotter W., Christe P., Glaizot O., 2022/10. Ecology and evolution, 12 (10) pp. e9357. Peer-reviewed.
Precise knowledge of commodity trade is needed to understand invasion flows
Ollier Sébastien, Bertelsmeier Cleo, 2022/10. Frontiers in Ecology and the Environment, 20 (8) pp. 467-473. Peer-reviewed.
 
The gut microbiota affects the social network of honeybees.
Liberti J., Kay T., Quinn A., Kesner L., Frank E.T., Cabirol A., Richardson T.O., Engel P., Keller L., 2022/10. Nature ecology & evolution, 6 (10) pp. 1471-1479. Peer-reviewed.
Measuring the Impact of Conservation: The Growing Importance of Monitoring Fauna, Flora and Funga
Stephenson PJ, Londoño-Murcia MC, Borges PAV, Claassens L., Frisch-Nwakanma H., Ling N., McMullan-Fisher S., Meeuwig JJ, Unter KMM, Walls JL et al., 2022/09/30. Diversity, 14 (10) p. 824. Peer-reviewed.
Compensatory recruitment allows amphibian population persistence in anthropogenic habitats.
Cayuela H., Monod-Broca B., Lemaître J.F., Besnard A., Gippet JMW, Schmidt B.R., Romano A., Hertach T., Angelini C., Canessa S. et al., 2022/09/20. Proceedings of the National Academy of Sciences of the United States of America, 119 (38) pp. e2206805119. Peer-reviewed.
The Joint Observation in Neonatology and Neurodevelopmental Outcome of Preterm Infants at Six Months Corrected Age: Secondary Outcome Data from a Randomised Controlled Trial.
Lovey O., Bickle-Graz M., Morisod Harari M., Horsch A., Schneider J., JOIN Research Consortium, 2022/09/13. Children, 9 (9) p. 1380. Peer-reviewed.
Rhythmicity is linked to expression cost at the protein level but to expression precision at the mRNA level
Laloum David, Robinson-Rechavi Marc, 2022/09/12. PLOS Computational Biology, 18 (9) pp. e1010399. Peer-reviewed.
 
Author Correction: DNA methylation predicts age and provides insight into exceptional longevity of bats.
Wilkinson G.S., Adams D.M., Haghani A., Lu A.T., Zoller J., Breeze C.E., Arnold B.D., Ball H.C., Carter G.G., Cooper L.N. et al., 2022/09/07. Nature communications, 13 (1) p. 5266. Peer-reviewed.
Estimating roe deer density using motion‐sensitive cameras in Switzerland
Hinojo Amael, Christe Philippe, Moreno Inès, Hofmeister Robin J., Dandliker Gottlieb, Zimmermann Fridolin, 2022/09/02. The Journal of Wildlife Management. Peer-reviewed.
 
A First Record of Organochlorine Pesticides in Barn Owls (Tyto alba) from Portugal: Assessing Trends from Variation in Feather and Liver Concentrations.
Roque I., Lourenço R., Marques A., Martínez-López E., Espín S., Gómez-Ramirez P., García-Fernández A.J., Roulin A., Rabaça J.E., 2022/09. Bulletin of environmental contamination and toxicology, 109 (3) pp. 436-442. Peer-reviewed.
 
Copy number changes in co-expressed odorant receptor genes enable selection for sensory differences in drosophilid species.
Auer T.O., Álvarez-Ocaña R., Cruchet S., Benton R., Arguello J.R., 2022/09. Nature ecology & evolution, 6 (9) pp. 1343-1353. Peer-reviewed.
Engaging women brings conservation benefits to snow leopard landscapes
Alexander Justine Shanti, Bijoor Ajay, Gurmet Kalzang, Murali Ranjini, Mishra Charudutt, Suryawanshi Kulbhushansingh R, 2022/09. Environmental Conservation, 49 (3) pp. 180-186. Peer-reviewed.
Evidence for a critical leopard conservation stronghold from a large protected landscape on the island of Sri Lanka
Samarasinghe Dinal J.S., Wikramanayake Eric D., Gopalaswamy Arjun M., Jayewardene Rukshan, Kumara Jehan, Fernando Javana, Gunawardene Kithsiri, Alexander Justine Shanti, Braczkowski Alexander, 2022/09. Global Ecology and Conservation, 37 pp. e02173.
Rapid diversification of the Australian <i>Amitermes</i> group during late Cenozoic climate change
Heimburger Bastian, Schardt Leonie, Brandt Alexander, Scheu Stefan, Hartke Tamara R., 2022/09. Ecography, 2022 (9).
Species recognition limits mating between hybridizing ant species.
Blacher P., Zahnd S., Purcell J., Avril A., Honorato T.O., Bailat-Rosset G., Staedler D., Brelsford A., Chapuisat M., 2022/09. Evolution; international journal of organic evolution, 76 (9) pp. 2105-2115. Peer-reviewed.
Bioeconomy and Circular Economy Approaches Need to Enhance the Focus on Biodiversity to Achieve Sustainability
Stephenson P. J., Damerell Anca, 2022/08/26. Sustainability, 14 (17) p. 10643. Peer-reviewed.
 
Radiation and hybridization underpin the spread of the fire ant social supergene.
Helleu Q., Roux C., Ross K.G., Keller L., 2022/08/23. Proceedings of the National Academy of Sciences of the United States of America, 119 (34) pp. e2201040119. Peer-reviewed.
Physicochemical space of synthetic and natural pesticides – a meta-analysis
Dubey Sylvain, Guignard Florian, Gaume Alain, Gindro Katia, Schnee Sylvain, Joz-Roland Mathis, Broennimann Olivier, Dubey Olga, 2022/08/19. PhytoFrontiers™. Peer-reviewed.
Federating and querying heterogeneous and distributed Web APIs and triple stores
Mendes de Farias Tarcisio, Dessimoz Christophe, Ayllon Benitez Aaron, Yang Chen, Long Jiao, Sima Ana-Claudia, 2022/08/02. dans 2022 ISMB Bio-Ontologies Community of Special Interest. Peer-reviewed.
Alien insect dispersal mediated by the global movement of commodities
Fenn-Moltu Gyda, Ollier Sébastien, Caton Barney, Liebhold Andrew M., Nahrung Helen, Pureswaran Deepa S., Turner Rebecca M., Yamanaka Takehiko, Bertelsmeier Cleo, 2022/08. Ecological Applications, 33 (1). Peer-reviewed.
An ancient truncated duplication of the anti-Müllerian hormone receptor type 2 gene is a potential conserved master sex determinant in the Pangasiidae catfish family.
Wen M., Pan Q., Jouanno E., Montfort J., Zahm M., Cabau C., Klopp C., Iampietro C., Roques C., Bouchez O. et al., 2022/08. Molecular ecology resources, 22 (6) pp. 2411-2428. Peer-reviewed.
Determinants of haemosporidian single- and co-infection risks in western palearctic birds
Pigeault Romain, Chevalier Mathieu, Cozzarolo Camille-Sophie, Baur Molly, Arlettaz Mathilde, Cibois Alice, Keiser André, Guisan Antoine, Christe Philippe, Glaizot Olivier, 2022/08. International Journal for Parasitology, 52 (9) pp. 617-627. Peer-reviewed.
Dynamics of sex-biased gene expression during development in the stick insect Timema californicum.
Djordjevic J., Dumas Z., Robinson-Rechavi M., Schwander T., Parker D.J., 2022/08. Heredity, 129 (2) pp. 113-122. Peer-reviewed.
Genomic analyses show extremely perilous conservation status of African and Asiatic cheetahs (Acinonyx jubatus).
Prost S., Machado A.P., Zumbroich J., Preier L., Mahtani-Williams S., Meissner R., Guschanski K., Brealey J.C., Fernandes C.R., Vercammen P. et al., 2022/08. Molecular ecology, 31 (16) pp. 4208-4223. Peer-reviewed.
 
Iterative evolution of supergene-based social polymorphism in ants.
Kay T., Helleu Q., Keller L., 2022/08. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377 (1856) p. 20210196. Peer-reviewed.
 
Mainstreaming remotely sensed ecosystem functioning in ecological niche models
Regos Adrián, Gonçalves João, Arenas-Castro Salvador, Alcaraz-Segura Domingo, Guisan Antoine, Honrado João P., 2022/08. Remote Sensing in Ecology and Conservation, 8 (4) pp. 431-447. Peer-reviewed.
Moths and butterflies on alien shores: Global biogeography of non‐native Lepidoptera
Mally Richard, Turner Rebecca M., Blake Rachael E., Fenn-Moltu Gyda, Bertelsmeier Cleo, Brockerhoff Eckehard G., Hoare Robert J. B., Nahrung Helen F., Roques Alain, Pureswaran Deepa S. et al., 2022/08. Journal of Biogeography, 49 (8) pp. 1455-1468. Peer-reviewed.
Rapid divergence in vegetative morphology of a wind-pollinated plant between populations at contrasting densities.
Tonnabel J., David P., Pannell J.R., 2022/08. Evolution; international journal of organic evolution, 76 (8) pp. 1737-1748. Peer-reviewed.
Recommendations for connecting molecular sequence and biodiversity research infrastructures through ELIXIR
Waterhouse Robert M., Adam-Blondon Anne-Françoise, Agosti Donat, Baldrian Petr, Balech Bachir, Corre Erwan, Davey Robert P., Lantz Henrik, Pesole Graziano, Quast Christian et al., 2022/08/01. F1000Research, 10 p. 1238. Peer-reviewed.
The role of wingbeat frequency and amplitude in flight power.
Krishnan K., Garde B., Bennison A., Cole N.C., Cole E.L., Darby J., Elliott K.H., Fell A., Gómez-Laich A., de Grissac S. et al., 2022/08. Journal of the Royal Society, Interface, 19 (193) p. 20220168. Peer-reviewed.
Sex and dominance: How to assess and interpret intersexual dominance relationships in mammalian societies
Kappeler Peter M., Huchard Elise, Baniel Alice, Canteloup Charlotte, Charpentier Marie J. E., Cheng Leveda, Davidian Eve, Duboscq Julie, Fichtel Claudia, Hemelrijk Charlotte K. et al., 2022/07/29. Frontiers in Ecology and Evolution, 10. Peer-reviewed.
 
Ant phylogenomics reveals a natural selection hotspot preceding the origin of complex eusociality.
Romiguier J., Borowiec M.L., Weyna A., Helleu Q., Loire E., La Mendola C., Rabeling C., Fisher B.L., Ward P.S., Keller L., 2022/07/11. Current biology, 32 (13) pp. 2942-2947.e4. Peer-reviewed.
Dioecy and chromosomal sex determination are maintained through allopolyploid speciation in the plant genus Mercurialis.
Toups M.A., Vicoso B., Pannell J.R., 2022/07. PLoS genetics, 18 (7) pp. e1010226. Peer-reviewed.
 
Identification of ancestral sex chromosomes in the frog Glandirana rugosa bearing XX-XY and ZZ-ZW sex-determining systems.
Miura I., Shams F., Jeffries D.L., Katsura Y., Mawaribuchi S., Perrin N., Ito M., Ogata M., Ezaz T., 2022/07. Molecular ecology, 31 (14) pp. 3859-3870. Peer-reviewed.
 
Diverse aging rates in ectothermic tetrapods provide insights for the evolution of aging and longevity
Reinke Beth A., Cayuela Hugo, Janzen Fredric J., Lemaître Jean-François, Gaillard Jean-Michel, Lawing A. Michelle, Iverson John B., Christiansen Ditte G., Martínez-Solano Iñigo, Sánchez-Montes Gregorio et al., 2022/06/24. Science, 376 (6600) pp. 1459-1466. Peer-reviewed.
Mosquito saliva enhances virus infection through sialokinin-dependent vascular leakage.
Lefteri D.A., Bryden S.R., Pingen M., Terry S., McCafferty A., Beswick E.F., Georgiev G., Van der Laan M., Mastrullo V., Campagnolo P. et al., 2022/06/14. Proceedings of the National Academy of Sciences of the United States of America, 119 (24) pp. e2114309119. Peer-reviewed.
Decreased Mite Reproduction to Select Varroa destructor (Acari: Varroidae) Resistant Honey Bees (Hymenoptera: Apidae): Limitations and Potential Methodological Improvements.
von Virag A., Guichard M., Neuditschko M., Dietemann V., Dainat B., 2022/06/08. Journal of economic entomology, 115 (3) pp. 695-705. Peer-reviewed.
 
Density-dependent selection and the maintenance of colour polymorphism in barn owls.
Kvalnes T., Sæther B.E., Engen S., Roulin A., 2022/06/08. Proceedings. Biological sciences, 289 (1976) p. 20220296. Peer-reviewed.
How HLA diversity is apportioned: influence of selection and relevance to transplantation.
Maróstica A.S., Nunes K., Castelli E.C., Silva NSB, Weir B.S., Goudet J., Meyer D., 2022/06/06. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377 (1852) p. 20200420. Peer-reviewed.
From white to green: Snow cover loss and increased vegetation productivity in the European Alps
Rumpf Sabine B., Gravey Mathieu, Brönnimann Olivier, Luoto Miska, Cianfrani Carmen, Mariethoz Gregoire, Guisan Antoine, 2022/06/03. Science, 376 (6597) pp. 1119-1122. Peer-reviewed.
Captivity and habituation to humans raise curiosity in vervet monkeys.
Forss SIF, Motes-Rodrigo A., Dongre P., Mohr T., van de Waal E., 2022/06. Animal cognition, 25 (3) pp. 671-682. Peer-reviewed.
Comparative analysis of diversity and environmental niches of soil bacterial, archaeal, fungal and protist communities reveal niche divergences along environmental gradients in the Alps
Malard Lucie A., Mod Heidi K., Guex Nicolas, Broennimann Olivier, Yashiro Erika, Lara Enrique, Mitchell Edward A.D., Niculita-Hirzel Helene, Guisan Antoine, 2022/06. Soil Biology and Biochemistry, 169 p. 108674. Peer-reviewed.
Experiment in semi-natural conditions did not confirm the influence of malaria infection on bird attractiveness to mosquitoes
Cozzarolo Camille-Sophie, Pigeault Romain, Isaïa Julie, Wassef Jérôme, Baur Molly, Glaizot Olivier, Christe Philippe, 2022/06. Parasites & Vectors, 15 (187). Peer-reviewed.
Exploring new genomic territories with emerging model insects.
Feron R., Waterhouse R.M., 2022/06. Current opinion in insect science, 51 p. 100902. Peer-reviewed.
Percolation across households in mechanistic models of non-pharmaceutical interventions in SARS-CoV-2 disease dynamics.
Franco C., Ferreira L.S., Sudbrack V., Borges M.E., Poloni S., Prado P.I., White L.J., Águas R., Kraenkel R.A., Coutinho R.M., 2022/06. Epidemics, 39 p. 100551. Peer-reviewed.
Shift in beneficial interactions during crop evolution.
Fréville H., Montazeaud G., Forst E., David J., Papa R., Tenaillon M.I., 2022/06. Evolutionary applications, 15 (6) pp. 905-918. Peer-reviewed.
The observed link between urbanization and invasion can depend on how invasion is measured
Gippet Jérôme M. W., Rocabert Charles, Colin Théotime, Grangier Julien, Tauru Hugo, Dumet Adeline, Mondy Nathalie, Kaufmann Bernard, 2022/06. Diversity and Distributions, 28 (6) pp. 1171-1179.
A new biodiversity paradigm for business
Stephenson PJ, Walls Judith, 2022/05/23. Amplify, 35 (5) pp. 6-14.
Drivers and outcomes of between-group conflict in vervet monkeys.
García M.G., de Guinea M., Bshary R., van de Waal E., 2022/05/23. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377 (1851) p. 20210145. Peer-reviewed.
 
Evolution of warfare by resource raiding favours polymorphism in belligerence and bravery.
Mullon C., Lehmann L., 2022/05/23. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377 (1851) p. 20210136. Peer-reviewed.
Modern venomics-Current insights, novel methods, and future perspectives in biological and applied animal venom research.
von Reumont B.M., Anderluh G., Antunes A., Ayvazyan N., Beis D., Caliskan F., Crnković A., Damm M., Dutertre S., Ellgaard L. et al., 2022/05/18. GigaScience, 11. Peer-reviewed.
Recurrent allopolyploidization, Y-chromosome introgression and the evolution of sexual systems in the plant genus Mercurialis.
Gerchen J.F., Veltsos P., Pannell J.R., 2022/05/09. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377 (1850) p. 20210224. Peer-reviewed.
Taxonbridge: an R package to create custom taxonomies based on the NCBI and GBIF taxonomies
Veldsman Werner P., Campli Giulia, Dind Sagane, Rech de Laval Valentine, Drage Harriet B., Waterhouse Robert M., Robinson-Rechavi Marc, 2022/05/04..
Sex-Specific Life History Affected by Stocking in Juvenile Brown Trout
Palejowski Hugo, Bylemans Jonas, Ammann Victor, Marques da Cunha Lucas, Nusbaumer David, Castro Isabelle, Uppal Anshu, Mobley Kenyon B., Knörr Susanne, Wedekind Claus, 2022/05/02. Frontiers in Ecology and Evolution, 10. Peer-reviewed.
Assessing environmental DNA metabarcoding and camera trap surveys as complementary tools for biomonitoring of remote desert water bodies
Mas-Carrió E., Schneider J., Nasanbat B., Ravchig S., Buxton M., Nyamukondiwa C., Stoffel C., Augugliaro C., Ceacero F., Taberlet P. et al., 2022/05. Environmental DNA, 4 (3) pp. 580-595. Peer-reviewed.
Can thermoregulatory traits and evolutionary history predict climatic niches of thermal specialists?
Bujan Jelena, Ollier Sébastien, Villalta Irene, Devers Séverine, Cerdá Xim, Amor Fernando, Dahbi Abdallah, Bertelsmeier Cleo, Boulay Raphaël, 2022/05. Diversity and Distributions, 28 (5) pp. 1081-1092. Peer-reviewed.
Compliance with recommended Varroa destructor treatment regimens improves the survival of honey bee colonies over winter.
Hernandez J., Hattendorf J., Aebi A., Dietemann V., 2022/05. Research in veterinary science, 144 pp. 1-10. Peer-reviewed.
CrowdGO: Machine learning and semantic similarity guided consensus Gene Ontology annotation.
Reijnders MJMF, Waterhouse R.M., 2022/05. PLoS computational biology, 18 (5) pp. e1010075. Peer-reviewed.
Effects of social organization and elevation on spatial genetic structure in a montane ant
Fontcuberta Amaranta, Kapun Martin, Tran Van Patrick, Purcell Jessica, Chapuisat Michel, 2022/05. Ecology and Evolution, 12 (5). Peer-reviewed.
High semi‐natural vegetation cover and heterogeneity of field sizes promote bird beta‐diversity at larger scales in Ethiopian Highlands
Marcacci Gabriel, Gremion Jérémy, Mazenauer Julien, Sori Tolera, Kebede Fanuel, Ewnetu Mihret, Christe Philippe, Arlettaz Raphaël, Jacot Alain, 2022/05. Journal of Applied Ecology, 59 (5) pp. 1219-1230.
New database enhances the accessibility of global biodiversity information for conservation monitoring
Stephenson P.J., Ruiz de Paz Angela, 2022/05. Oryx, 56 (3) pp. 329-330. Peer-reviewed.
Parthenogenesis in Darevskia lizards: A rare outcome of common hybridization, not a common outcome of rare hybridization.
Freitas S., Westram A.M., Schwander T., Arakelyan M., Ilgaz Ç., Kumlutas Y., Harris D.J., Carretero M.A., Butlin R.K., 2022/05. Evolution; international journal of organic evolution, 76 (5) pp. 899-914. Peer-reviewed.
Scarless excision of an insertion sequence restores capsule production and virulence in Acinetobacter baumannii.
Whiteway C., Valcek A., Philippe C., Strazisar M., De Pooter T., Mateus I., Breine A., Van der Henst C., 2022/05. The ISME journal, 16 (5) pp. 1473-1477. Peer-reviewed.
 
Tools and applications for integrative analysis of DNA methylation in social insects.
Morandin C., Brendel V.P., 2022/05. Molecular ecology resources, 22 (4) pp. 1656-1674. Peer-reviewed.
 
Phylogeny and taxonomy of the African frog genus Strongylopus (Anura: Pyxicephalidae)
Channing Alan, Schmitz Andreas, Zancolli Giulia, Conradie Werner, Rödel Mark-Oliver, 2022/04/21. Revue suisse de Zoologie, 129 (1).
Home range size and habitat quality affect breeding success but not parental investment in barn owl males.
Séchaud R., Schalcher K., Almasi B., Bühler R., Safi K., Romano A., Roulin A., 2022/04/20. Scientific reports, 12 (1) p. 6516. Peer-reviewed.
Assigning metabolic rate measurements to torpor and euthermy in heterothermic endotherms: 'torpor', a new package for R.
Fasel N.J., Vullioud C., Genoud M., 2022/04/15. Biology open, 11 (4) pp. bio059064. Peer-reviewed.
Anopheles mosquitoes reveal new principles of 3D genome organization in insects.
Lukyanchikova V., Nuriddinov M., Belokopytova P., Taskina A., Liang J., Reijnders MJMF, Ruzzante L., Feron R., Waterhouse R.M., Wu Y. et al., 2022/04/12. Nature communications, 13 (1) p. 1960. Peer-reviewed.
 
Strong Parallel Differential Gene Expression Induced by Hatchery Rearing Weakly Associated with Methylation Signals in Adult Coho Salmon (O. kisutch).
Leitwein M., Wellband K., Cayuela H., Le Luyer J., Mohns K., Withler R., Bernatchez L., 2022/04/10. Genome biology and evolution, 14 (4) pp. evac036. Peer-reviewed.
“Phylogenetics in the Genomic Era” brings together experts in the field to present a comprehensive synthesis
Waterhouse Robert, Meusemann Karen, 2022/04/08. Peer Community In Genomics.
Behavioral response to heat stress of twig-nesting canopy ants.
Bujan J., Yanoviak S.P., 2022/04. Oecologia, 198 (4) pp. 947-955. Peer-reviewed.
Intraspecific trait variation in alpine plants relates to their elevational distribution
Rixen Christian, Wipf Sonja, Rumpf Sabine B., Giejsztowt Justyna, Millen Jules, Morgan John W., Nicotra Adrienne B., Venn Susanna, Zong Shengwei, Dickinson Katharine J. M. et al., 2022/04. Journal of Ecology, 110 (4) pp. 860-875. Peer-reviewed.
Soil protist function varies with elevation in the Swiss Alps.
Mazel F., Malard L., Niculita-Hirzel H., Yashiro E., Mod H.K., Mitchell EAD, Singer D., Buri A., Pinto E., Guex N. et al., 2022/04. Environmental microbiology, 24 (4) pp. 1689-1702. Peer-reviewed.
 
Tropical ant community responses to experimental soil warming.
Bujan J., Nottingham A.T., Velasquez E., Meir P., Kaspari M., Yanoviak S.P., 2022/04. Biology letters, 18 (4) p. 20210518. Peer-reviewed.
 
Mild chronic exposure to pesticides alters physiological markers of honey bee health without perturbing the core gut microbiota.
Almasri H., Liberti J., Brunet J.L., Engel P., Belzunces L.P., 2022/03/11. Scientific reports, 12 (1) p. 4281. Peer-reviewed.
Long-distance dispersal of pigeons and doves generated new ecological opportunities for host-switching and adaptive radiation by their parasites.
Boyd B.M., Nguyen N.P., Allen J.M., Waterhouse R.M., Vo K.B., Sweet A.D., Clayton D.H., Bush S.E., Shapiro M.D., Johnson K.P., 2022/03/09. Proceedings. Biological sciences, 289 (1970) p. 20220042. Peer-reviewed.
Assessing the best time interval between doses in a two-dose vaccination regimen to reduce the number of deaths in an ongoing epidemic of SARS-CoV-2.
Souto Ferreira L., Canton O., da Silva RLP, Poloni S., Sudbrack V., Borges M.E., Franco C., Marquitti FMD, de Moraes J.C., Veras MASM et al., 2022/03. PLoS computational biology, 18 (3) pp. e1009978. Peer-reviewed.
 
Distributions and habitats of the two partly allopatric cryptic species of the vulnerable moss Hamatocaulis vernicosus (Bryophyta) in Europe
Hedenäs Lars, Collart Flavien, Heras Patxi, Infante Marta, Kooijman Annemieke, Kučera Jan, 2022/03. Botanical Journal of the Linnean Society, boac011. Peer-reviewed.
From cultivar mixtures to allelic mixtures: opposite effects of allelic richness between genotypes and genotype richness in wheat.
Montazeaud G., Flutre T., Ballini E., Morel J.B., David J., Girodolle J., Rocher A., Ducasse A., Violle C., Fort F. et al., 2022/03. The New phytologist, 233 (6) pp. 2573-2584. Peer-reviewed.
 
Genome biology of the darkedged splitfin, Girardinichthys multiradiatus, and the evolution of sex chromosomes and placentation.
Du K., Pippel M., Kneitz S., Feron R., da Cruz I., Winkler S., Wilde B., Avila Luna E.G., Myers G., Guiguen Y. et al., 2022/03. Genome research, 32 (3) pp. 583-594. Peer-reviewed.
Genomic consequences of colonisation, migration and genetic drift in barn owl insular populations of the eastern Mediterranean.
Machado A.P., Topaloudis A., Cumer T., Lavanchy E., Bontzorlos V., Ceccherelli R., Charter M., Kassinis N., Lymberakis P., Manzia F. et al., 2022/03. Molecular ecology, 31 (5) pp. 1375-1388. Peer-reviewed.
 
Polar soils exhibit distinct patterns in microbial diversity and dominant phylotypes
Ji Mukan, Kong Weidong, Jia Hongzeng, Delgado-Baquerizo Manuel, Zhou Tianqi, Liu Xiaodong, Ferrari Belinda C., Malard Lucie, Liang Chao, Xue Kai et al., 2022/03. Soil Biology and Biochemistry, 166 p. 108550.
The era of reference genomes in conservation genomics.
Formenti G., Theissinger K., Fernandes C., Bista I., Bombarely A., Bleidorn C., Ciofi C., Crottini A., Godoy J.A., Höglund J. et al., 2022/03. Trends in ecology & evolution, 37 (3) pp. 197-202. Peer-reviewed.
Assessing species coverage and assembly quality of rapidly accumulating sequenced genomes.
Feron R., Waterhouse R.M., 2022/02/25. GigaScience, 11 pp. giac006. Peer-reviewed.
Convergent consequences of parthenogenesis on stick insect genomes.
Jaron K.S., Parker D.J., Anselmetti Y., Tran Van P., Bast J., Dumas Z., Figuet E., François C.M., Hayward K., Rossier V. et al., 2022/02/25. Science advances, 8 (8) pp. eabg3842. Peer-reviewed.
Wei2GO: weighted sequence similarity-based protein function prediction
Reijnders Maarten J.M.F., 2022/02/15. PeerJ, 10 pp. e12931. Peer-reviewed.
Energy allocation shifts from sperm production to self-maintenance at low temperatures in male bats.
Komar E., Fasel N.J., Szafrańska P.A., Dechmann DKN, Zegarek M., Ruczyński I., 2022/02/08. Scientific reports, 12 (1) p. 2138. Peer-reviewed.
Adaptation to a bacterial pathogen in Drosophila melanogaster is not aided by sexual selection.
Sharda S., Kawecki T.J., Hollis B., 2022/02. Ecology and evolution, 12 (2) pp. e8543. Peer-reviewed.
 
Characterization of Queen Supergene Pheromone in the Red Imported Fire Ant Using Worker Discrimination Assays.
Zeng H., Millar J.G., Chen L., Keller L., Ross K.G., 2022/02. Journal of chemical ecology, 48 (2) pp. 109-120. Peer-reviewed.
Decreasing relatedness among mycorrhizal fungi in a shared plant network increases fungal network size but not plant benefit.
van 't Padje A., Klein M., Caldas V., Oyarte Galvez L., Broersma C., Hoebe N., Sanders I.R., Shimizu T., Kiers E.T., 2022/02. Ecology letters, 25 (2) pp. 509-520. Peer-reviewed.
 
Interpopulation differences in male reproductive effort drive the population dynamics of a host exposed to an emerging fungal pathogen.
Valenzuela-Sánchez A., Azat C., Cunningham A.A., Delgado S., Bacigalupe L.D., Beltrand J., Serrano J.M., Sentenac H., Haddow N., Toledo V. et al., 2022/02. The Journal of animal ecology, 91 (2) pp. 308-319. Peer-reviewed.
Mapping linkages between biodiversity and nature’s contributions to people: a ValPar.CH perspective
Rey Pierre-Louis, Kuelling Nathan, Lehmann Anthony, Guisan Antoine, 2022/02/01. ValPar.CH Working Paper Series, 2.
Setting priorities for climate change adaptation of Critical Sites in the Africa-Eurasian waterbird flyways.
Breiner F.T., Anand M., Butchart SHM, Flörke M., Fluet-Chouinard E., Guisan A., Hilarides L., Jones V.R., Kalyakin M., Lehner B. et al., 2022/02. Global change biology, 28 (3) pp. 739-752. Peer-reviewed.
 
Sex-related differences in aging rate are associated with sex chromosome system in amphibians.
Cayuela H., Lemaître J.F., Léna J.P., Ronget V., Martínez-Solano I., Muths E., Pilliod D.S., Schmidt B.R., Sánchez-Montes G., Gutiérrez-Rodríguez J. et al., 2022/02. Evolution; international journal of organic evolution, 76 (2) pp. 346-356. Peer-reviewed.
Social environment affects sensory gene expression in ant larvae.
Pulliainen U., Morandin C., Bos N., Sundström L., Schultner E., 2022/02. Insect molecular biology, 31 (1) pp. 1-9. Peer-reviewed.
 
The seasonal variation of basal metabolic rate is related to the expression of torpor among small mammals.
Genoud M., 2022/02. Journal of thermal biology, 104 p. 103197. Peer-reviewed.
Collective knowledge and the dynamics of culture in chimpanzees.
Whiten A., Harrison R.A., McGuigan N., Vale G.L., Watson S.K., 2022/01/31. Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 377 (1843) p. 20200321. Peer-reviewed.
 
INODE : Building an End-to-End Data Exploration System in Practice
Amer-Yahia Sihem, Koutrika Georgia, Braschler Martin, Calvanese Diego, Lanti Davide, Lücke-Tieke Hendrik, Mosca Alessandro, Mendes de Farias Tarcisio, Papadopoulos Dimitris, Patil Yogendra et al., 2022/01/31. ACM SIGMOD Record, 50 (4) pp. 23-29.
Transgenerational plasticity of dispersal‐related traits in a ciliate: genotype‐dependency and fitness consequences
Cayuela Hugo, Jacob Staffan, Schtickzelle Nicolas, Verdonck Rik, Philippe Hervé, Laporte Martin, Huet Michèle, Bernatchez Louis, Legrand Delphine, 2022/01/27. Oikos. Peer-reviewed.
Simulated herbivory enhances leaky sex expression in the dioecious herb Mercurialis annua
Villamil Nora, Li Xinji, Seddon Emily, Pannell John R, 2022/01/08. Annals of Botany, 129 (1) pp. 79-86.
Functional Constraints on Insect Immune System Components Govern Their Evolutionary Trajectories.
Ruzzante L., Feron R., Reijnders MJMF, Thiébaut A., Waterhouse R.M., 2022/01/07. Molecular biology and evolution, 39 (1) pp. msab352. Peer-reviewed.
Landscape and Climatic Variations Shaped Secondary Contacts amid Barn Owls of the Western Palearctic.
Cumer T., Machado A.P., Dumont G., Bontzorlos V., Ceccherelli R., Charter M., Dichmann K., Kassinis N., Lourenço R., Manzia F. et al., 2022/01/07. Molecular biology and evolution, 39 (1) pp. msab343. Peer-reviewed.
Convergent evolution of venom gland transcriptomes across Metazoa.
Zancolli G., Reijnders M., Waterhouse R.M., Robinson-Rechavi M., 2022/01/04. Proceedings of the National Academy of Sciences of the United States of America, 119 (1) pp. e2111392119. Peer-reviewed.
 
Global geographical range and population size of the habitat specialist Codonoblepharon forsteri (Dicks.) Goffinet in a changing climate.
Callaghan Des A., Aleffi Michele, Alegro Antun, Bisang Irene, Blockeel Tom L., Collart Flavien, Dragićević Snežana, Draper Isabel, Erdağ Adnan, Erzberger Peter et al., 2022/01/02. Journal of Bryology, 44 (1) pp. 35-50. Peer-reviewed.
 
The COLOSS <i>BEEBOOK</i>, a Manual of Standard Methods for Honey Bee Research
Carreck Norman L., Dietemann Vincent, Ellis James D., Evans Jay D., Neumann Peter, Chantawannakul Panuwan, 2022/01/02. Bee World, 99 (1) pp. 11-13.
A targeted amplicon sequencing panel to simultaneously identify mosquito species and Plasmodium presence across the entire Anopheles genus.
Makunin A., Korlević P., Park N., Goodwin S., Waterhouse R.M., von Wyschetzki K., Jacob C.G., Davies R., Kwiatkowski D., St Laurent B. et al., 2022/01. Molecular ecology resources, 22 (1) pp. 28-44. Peer-reviewed.
 
Accounting for niche truncation to improve spatial and temporal predictions of species distributions
Chevalier M., Zarzo-Arias A., Guélat J., Mateo R.G., Guisan A., 2022. Frontiers in Ecology and Evolution, 10 p. 944116. Peer-reviewed.
Bacterial Colonisation: From Airborne Dispersal to Integration Within the Soil Community.
Malard L.A., Pearce D.A., 2022. Frontiers in microbiology, 13 p. 782789. Peer-reviewed.
Bio-SODA UX: enabling natural language question answering over knowledge graphs with user disambiguation.
Sima A.C., Mendes de Farias T., Anisimova M., Dessimoz C., Robinson-Rechavi M., Zbinden E., Stockinger K., 2022. Distributed and parallel databases, 40 (2-3) pp. 409-440. Peer-reviewed.
 
Biodiversité et services écosystémiques pour les humains
Guisan A., Rey P.-L., Kuelling N., Lehmann A., 2022. dans Santé et Environnement: Vers une nouvelle approche globale, Senn Nicolas, Del Rio Maria, Gonzalez Holguera Julia, Gaille Marie (Eds), Edition RMS.
 
Chromosome-level genome assembly and annotation of two lineages of the ant Cataglyphis hispanica: stepping stones towards genomic studies of hybridogenesis and thermal adaptation in desert ants
Darras Hugo, De Souza Araujo Natalia, Baudry Lyam, Guiglielmoni Nadège, Lorite Pedro, Marbouty Martial, Rodriguez Fernando, Arkhipova Irina, Koszul Romain, Flot Jean-Francois et al., 2022. Peer Community Journal, 2. Peer-reviewed.
Comparing climatic suitability and niche distances to explain populations responses to extreme climatic events
Perez-Navarro M.A., Broennimann O., Esteve M.A., Bagaria G., Guisan A., Lloret F., 2022. Ecography pp. e06263. Peer-reviewed.
Convergent evolution of a labile nutritional symbiosis in ants
Jackson R., Monnin D., Patapiou P.A., Golding G., Helanterä H., Oettler J., Heinze J., Wurm Y., Economou C.K., Chapuisat M. et al., 2022. The ISME journal, 16 (9) pp. 2114-2122. Peer-reviewed.
 
Creation and unification of development and life stage ontologies for animals
Niknejad Anne, Mungall Christopher J., Osumi-Sutherland David, Robinson-Rechavi Marc, Bastian Frederic B., 2022..
Disentangling the effects of jasmonate and tissue loss on the sex allocation of an annual plant.
Villamil N., Sommervogel B., Pannell J.R., 2022. Frontiers in plant science, 13 p. 812558. Peer-reviewed.
 
Diversity matters in wheat mixtures: A genomic survey of the impact of genetic diversity on the performance of 12 way durum wheat mixtures grown in two contrasted and controlled environments.
Alsabbagh P., Gay L., Colombo M., Montazeaud G., Ardisson M., Rocher A., Allard V., David J.L., 2022. PloS one, 17 (12) pp. e0276223. Peer-reviewed.
Evolution of warfare by resource raiding favors polymorphism in belligerence and bravery
Mullon C., Lehmann L., 2022. Philosophical transactions of the Royal Society of London. Series B, Biological sciences. Peer-reviewed.
 
Food and habitats requirements of the Eurasian Scops Owl (Otus scops) in Switzerland revealed by very high-resolution multi-scale models.
Theux Coralie, Klein Noëlle, Garibaldi Elodie, Jacot Alain, Eichhorn Sylvain, Guisan Antoine, Pradervand Jean-Nicolas, 2022/01. Ibis, 164 (1) pp. 240-254. Peer-reviewed.
Four levers of reciprocity across human societies: concepts, analysis and predictions
Lehmann Laurent, Powers Simon T., van Schaik Carel P., 2022. Evolutionary Human Sciences, 4 pp. e11. Peer-reviewed.
 
Fungal infection in free-ranging snakes caused by opportunistic species
Dubey Sylvain, Pellaud Sébastien, Gindro Katia, Schuerch Johan, Golay Joaquim, Gloor Robin, Ghali Karim, Dubey Olga, 2022. Emerging animal species, 3 p. 100001. Peer-reviewed.
Habitat preferences of the Ortolan Bunting ( Emberiza hortulana ) in its prime wintering grounds, the cereal‐dominated Ethiopian Highlands
Gremion Jérémy, Marcacci Gabriel, Mazenauer Julien, Sori Tolera, Kebede Fanuel, Ewnetu Mihret, Christe Philippe, Arlettaz Raphaël, Jacot Alain, 2022/01/01. Ibis, 164 (164) pp. 74-87.
 
Inactivation of the Anti-Müllerian Hormone Receptor Type 2 (amhrII) Gene in Northern Pike (Esox lucius) Results in Male-To-Female Sex Reversal.
Pan Q., Herpin A., Guiguen Y., 2022. Sexual development, 16 (4) pp. 289-294. Peer-reviewed.
Lack of evidence for trans-generational immune priming against the honey bee pathogen Melissococcus plutonius.
Ory F., Duchemin V., Kilchenmann V., Charrière J.D., Dainat B., Dietemann V., 2022. PloS one, 17 (5) pp. e0268142. Peer-reviewed.
Modeling the distribution of coprophagous beetle species in the Western Swiss Alps
Cosandey V., Broennimann O., Guisan A., 2022. Alpine Entomology, 6 pp. 25-38. Peer-reviewed.
Rank-invariant estimation of inbreeding coefficients.
Zhang Q.S., Goudet J., Weir B.S., 2022/01. Heredity, 128 (1) pp. 1-10. Peer-reviewed.
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