Microbiology

Publications | Phd and Masters theses

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2334 publications

... | 2022 | 2021 | 2020 | ...
2022
 
External Quality Assessment of SARS-CoV-2 Sequencing: an ESGMD-SSM Pilot Trial across 15 European Laboratories.
Wegner F., Roloff T., Huber M., Cordey S., Ramette A., Gerth Y., Bertelli C., Stange M., Seth-Smith HMB, Mari A. et al., 2022/01/19. Journal of clinical microbiology, 60 (1) pp. e0169821. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2E7163A8114F]
Remdésivir précoce pour prévenir l’évolution vers un Covid-19 sévère en ambulatoire.
Meylan P., 2022/01/19. Revue medicale suisse, 18 (764-5) pp. 90-91. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_008729DBF1F5]
 
Selective Culture Medium for Screening of Fosfomycin Resistance in Enterobacterales.
Nordmann P., Sadek M., Ortiz de la Rosa J.M., Pfister S., Fournier C., Poirel L., 2022/01/19. Journal of clinical microbiology, 60 (1) pp. e0206321. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A135ED490121]
Increased prevalence of clonal hematopoiesis of indeterminate potential amongst people living with HIV.
Bick A.G., Popadin K., Thorball C.W., Uddin M.M., Zanni M.V., Yu B., Cavassini M., Rauch A., Tarr P., Schmid P. et al., 2022/01/12. Scientific reports, 12 (1) p. 577. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_482297EB27F3]
 
Case report: Disseminated Scedosporium apiospermum infection with invasive right atrial mass in a heart transplant patient.
Bourlond B., Cipriano A., Regamey J., Papadimitriou-Olivgeris M., Kamani C., Seidel D., Lamoth F., Muller O., Yerly P., 2022. Frontiers in cardiovascular medicine, 9 p. 1045353. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_653060C72977]
Detection of SARS-CoV-2 infection clusters: The useful combination of spatiotemporal clustering and genomic analyses.
Choi Y., Ladoy A., De Ridder D., Jacot D., Vuilleumier S., Bertelli C., Guessous I., Pillonel T., Joost S., Greub G., 2022. Frontiers in public health, 10 p. 1016169. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6AAEC5C0649D]
Editorial: Antifungal Resistance: From Molecular to Global Issues.
Hagiwara D., Fillinger S., Sanglard D., 2022. Frontiers in cellular and infection microbiology, 12 p. 867398. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C4B29A7D6547]
 
Exploring m6A and m5C Epitranscriptomes upon Viral Infection: an Example with HIV.
Cristinelli S., Angelino P., Ciuffi A., 2022. Journal of visualized experiments 181. Peer-reviewed.
[DOI][Pmid][serval:BIB_5DC632351E38]
How Yeast Antifungal Resistance Gene Analysis Is Essential to Validate Antifungal Susceptibility Testing Systems.
Pellaton N., Sanglard D., Lamoth F., Coste A.T., 2022. Frontiers in cellular and infection microbiology, 12 p. 859439. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_CC99145B5F54]
Molecular typing of Clostridioides difficile from frozen stool samples to investigate cross-transmissions: A proof of concept.
Blanc D.S., Poncet F., Grandbastien B., Prod'hom G., Greub G., Senn L., 2022. Indian journal of medical microbiology, 40 (4) pp. 531-535. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_AA245F1842BE]
 
Next-generation sequencing in routine clinical microbiology and infectious diseases: an ESGMD-ESGEM ESCMID postgraduate course.
Aamot H.V., Claas ECJ, Couto N., Westh H., Greub G., Rossen JWA, 2022. New microbes and new infections, 49-50 p. 101046. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2433D81F9449]
Prevalence of anal dysplasia and HPV genotypes in gynecology patients: The ANGY cross-sectional prospective clinical study protocol.
Pache B., Balaya V., Mathis J., Hübner M., Sahli R., Cavassini M., Sempoux C., Mathevet P., Jacot-Guillarmod M., 2022. PloS one, 17 (10) pp. e0276438. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_74630FA51C0D]
2021
 
Current State of Laboratory Automation in Clinical Microbiology Laboratory.
Antonios K., Croxatto A., Culbreath K., 2021/12/30. Clinical chemistry, 68 (1) pp. 99-114. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_09E420FA5726]
Assessment of the In Vitro and In Vivo Antifungal Activity of NSC319726 against Candida auris.
Li J., Coste A.T., Bachmann D., Sanglard D., Lamoth F., 2021/12/22. Microbiology spectrum, 9 (3) pp. e0139521. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A88593023DD0]
Decreased Fetal Movements: A Sign of Placental SARS-CoV-2 Infection with Perinatal Brain Injury.
Favre G., Mazzetti S., Gengler C., Bertelli C., Schneider J., Laubscher B., Capoccia R., Pakniyat F., Ben Jazia I., Eggel-Hort B. et al., 2021/12/15. Viruses, 13 (12) p. 2517. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_93841AE82729]
 
Multicenter Technical Validation of 30 Rapid Antigen Tests for the Detection of SARS-CoV-2 (VALIDATE).
Greub G., Caruana G., Schweitzer M., Imperiali M., Muigg V., Risch M., Croxatto A., Opota O., Heller S., Albertos Torres D. et al., 2021/12/15. Microorganisms, 9 (12) p. 2589. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F3DCE9F873C8]
PCR performance in the SARS-CoV-2 Omicron variant of concern?
Metzger CMJA, Lienhard R., Seth-Smith HMB, Roloff T., Wegner F., Sieber J., Bel M., Greub G., Egli A., 2021/12/06. Swiss medical weekly, 151 pp. w30120. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_679AEA543712]
Blood virosphere in febrile Tanzanian children.
Cordey S., Laubscher F., Hartley M.A., Junier T., Keitel K., Docquier M., Guex N., Iseli C., Vieille G., Le Mercier P. et al., 2021/12. Emerging microbes & infections, 10 (1) pp. 982-993. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B0B6B061E9F0]
 
Distribution of pathogens and antimicrobial resistance in bacteraemia according to hospitalization duration: a nationwide surveillance study in Switzerland.
Buetti N., Marschall J., Timsit J.F., Atkinson A., Kronenberg A., Sommerstein R., Swiss Centre for Antibiotic Resistance (ANRESIS), 2021/12. Clinical microbiology and infection, 27 (12) pp. 1820-1825. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A74783E0F865]
Evaluation of SuperCAZ/AVI® Medium for Screening Ceftazidime-avibactam Resistant Gram-negative Isolates.
Sadek M., Poirel L., Dominguez Pino M., D'Emidio F., Pomponio S., Nordmann P., 2021/12. Diagnostic microbiology and infectious disease, 101 (4) p. 115475. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_CFA892B456C6]
From Your Nose to Your Toes: A Review of Severe Acute Respiratory Syndrome Coronavirus 2 Pandemic‒Associated Pernio.
Arkin L.M., Moon J.J., Tran J.M., Asgari S., O'Farrelly C., Casanova J.L., Cowen E.W., Mays J.W., Singh A.M., Drolet B.A. et al., 2021/12. The Journal of investigative dermatology, 141 (12) pp. 2791-2796. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_867ED9E568B7]
 
Hypervirulent Klebsiella pneumoniae ST23 producing OXA-48 in Switzerland.
Blanc D.S., Poirel L., Van Singer M., Greub G., Nordmann P., 2021/12. International journal of antimicrobial agents, 58 (6) p. 106457. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9E9462F72109]
Increasing morbidity and mortality of candidemia over one decade in a Swiss university hospital.
Battistolo J., Glampedakis E., Damonti L., Poissy J., Grandbastien B., Kalbermatter L., Pagani J.L., Eggimann P., Bochud P.Y., Calandra T. et al., 2021/12. Mycoses, 64 (12) pp. 1512-1520. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_59B304F1CB77]
International circulation of aztreonam/avibactam-resistant NDM-5-producing Escherichia coli isolates: successful epidemic clones.
Sadek M., Ruppé E., Habib A., Zahra R., Poirel L., Nordmann P., 2021/12. Journal of global antimicrobial resistance, 27 pp. 326-328. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_2734B20A3D33]
 
Multicenter Evaluation of Rapid BACpro<sup>®</sup> II for the Accurate Identification of Microorganisms Directly from Blood Cultures Using MALDI-TOF MS.
Oviaño M., Ingebretsen A., Steffensen A.K., Croxatto A., Prod'hom G., Quiroga L., Bou G., Greub G., Rodríguez-Temporal D., Rodríguez-Sánchez B., 2021/12/01. Diagnostics, 11 (12) p. 2251. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7F62466B4AB7]
 
Impact of Delaying Antiretroviral Treatment During Primary Human Immunodeficiency Virus Infection on Telomere Length.
Raffenberg M., Engel T., Schoepf I.C., Kootstra N.A., Reiss P., Braun D.L., Thorball C.W., Fellay J., Kouyos R.D., Ledergerber B. et al., 2021/11/22. The Journal of infectious diseases, 224 (10) pp. 1775-1784. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AB2761A109CD]
 
Navigating the Uncertainties of COVID-19-Associated Aspergillosis: A Comparison With Influenza-Associated Aspergillosis.
Lamoth F., Lewis R.E., Walsh T.J., Kontoyiannis D.P., 2021/11/22. The Journal of infectious diseases, 224 (10) pp. 1631-1640. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4FB69C41F305]
 
Biotransformation of Chemicals at the Water-Sediment Interface-Toward a Robust Simulation Study Setup.
Seller C., Özel Duygan B.D., Honti M., Fenner K., 2021/11/17. ACS environmental Au, 1 (1) pp. 46-57. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AC76424EDAB6]
 
Characterization of RNA Sensing Pathways in Hepatoma Cell Lines and Primary Human Hepatocytes.
Nicolay W., Moeller R., Kahl S., Vondran FWR, Pietschmann T., Kunz S., Gerold G., 2021/11/04. Cells, 10 (11) p. 3019. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_CA73769E425F]
Viral genome wide association study identifies novel hepatitis C virus polymorphisms associated with sofosbuvir treatment failure.
Smith D.A., Fernandez-Antunez C., Magri A., Bowden R., Chaturvedi N., Fellay J., McLauchlan J., Foster G.R., Irving W.L., STOP-HCV Consortium et al., 2021/10/20. Nature communications, 12 (1) p. 6105. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_1FACB1601518]
Investigating Candida glabrata Urinary Tract Infections (UTIs) in Mice Using Bioluminescence Imaging.
Schrevens S., Sanglard D., 2021/10/09. Journal of fungi, 7 (10) p. 844. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5E410F94279E]
A high-resolution HLA reference panel capturing global population diversity enables multi-ancestry fine-mapping in HIV host response.
Luo Y., Kanai M., Choi W., Li X., Sakaue S., Yamamoto K., Ogawa K., Gutierrez-Arcelus M., Gregersen P.K., Stuart P.E. et al., 2021/10. Nature genetics, 53 (10) pp. 1504-1516. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B110F32BA2DA]
 
A Selective Culture Medium for Screening Carbapenem Resistance in Pseudomonas spp.
Nordmann P., Fournier C., Poirel L., 2021/10. Microbial drug resistance, 27 (10) pp. 1355-1359. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_3D9E08AE5D87]
Trends of the Epidemiology of Candidemia in Switzerland: A 15-Year FUNGINOS Survey.
Adam K.M., Osthoff M., Lamoth F., Conen A., Erard V., Boggian K., Schreiber P.W., Zimmerli S., Bochud P.Y., Neofytos D. et al., 2021/10. Open forum infectious diseases, 8 (10) pp. ofab471. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E1C2CA5BE723]
Assessment of SARS-CoV-2 Genome Sequencing: Quality Criteria and Low-Frequency Variants.
Jacot D., Pillonel T., Greub G., Bertelli C., 2021/09/20. Journal of clinical microbiology, 59 (10) pp. e0094421. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6FED6E6FD3E3]
 
Contribution of PER-Type and NDM-Type β-Lactamases to Cefiderocol Resistance in Acinetobacter baumannii.
Poirel L., Sadek M., Nordmann P., 2021/09/17. Antimicrobial agents and chemotherapy, 65 (10) pp. e0087721. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4A7D9E662DB3]
 
Participation of the ABC Transporter CDR1 in Azole Resistance of Candida lusitaniae.
Borgeat V., Brandalise D., Grenouillet F., Sanglard D., 2021/09/15. Journal of fungi, 7 (9) p. 760. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_ED66ACF25AAE]
 
Size and duration of COVID-19 clusters go along with a high SARS-CoV-2 viral load: A spatio-temporal investigation in Vaud state, Switzerland.
Ladoy A., Opota O., Carron P.N., Guessous I., Vuilleumier S., Joost S., Greub G., 2021/09/15. The Science of the total environment, 787 p. 147483. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7472C94BBC88]
 
Sensitivity of Rapid Antigen Testing and RT-PCR Performed on Nasopharyngeal Swabs versus Saliva Samples in COVID-19 Hospitalized Patients: Results of a Prospective Comparative Trial (RESTART).
Kritikos A., Caruana G., Brouillet R., Miroz J.P., Abed-Maillard S., Stieger G., Opota O., Croxatto A., Vollenweider P., Bart P.A. et al., 2021/09/09. Microorganisms, 9 (9) p. 1910. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F1553D2BFA41]
 
Author Correction: Novel Chlamydia species isolated from snakes are temperature-sensitive and exhibit decreased susceptibility to azithromycin.
Staub E., Marti H., Biondi R., Levi A., Donati M., Leonard C.A., Ley S.D., Pillonel T., Greub G., Seth-Smith HMB et al., 2021/09/08. Scientific reports, 11 (1) p. 18244. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_3948A9CB0AE5]
 
An Educational Game Evening for Medical Residents: A Proof of Concept to Evaluate the Impact on Learning of the Use of Games.
Ghelfenstein-Ferreira T., Beaumont A.L., Dellière S., Peiffer-Smadja N., Pineros N., Carbonnelle E., Greub G., Abbara S., Luong Nguyen L.B., Lescat M., 2021/09/01. Journal of microbiology & biology education, 22 (2) pp. e00119-21. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7CFD8ED2910E]
COVID-19-associated pulmonary aspergillosis (CAPA): how big a problem is it?
Fekkar A., Neofytos D., Nguyen M.H., Clancy C.J., Kontoyiannis D.P., Lamoth F., 2021/09. Clinical microbiology and infection, 27 (9) pp. 1376-1378. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_16E52ACE988B]
 
Evaluation of sixteen ELISA SARS-CoV-2 serological tests.
Jacot D., Moraz M., Coste A.T., Aubry C., Sacks J.A., Greub G., Croxatto A., 2021/09. Journal of clinical virology, 142 p. 104931. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_00982AEB2445]
Pancreatitis, hypereosinophilia and bilateral pulmonary infiltrates as presentation of acute Q fever.
Cancela Costa A., Chheang C., Thorens O., Lamy O., Prella M., Babaker M., Lamoth F., Greub G., 2021/09. New microbes and new infections, 43 p. 100940. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6025077A999E]
 
Structural Basis for a Neutralizing Antibody Response Elicited by a Recombinant Hantaan Virus Gn Immunogen.
Rissanen I., Krumm S.A., Stass R., Whitaker A., Voss J.E., Bruce E.A., Rothenberger S., Kunz S., Burton D.R., Huiskonen J.T. et al., 2021/08/31. mBio, 12 (4) pp. e0253120. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_44C482F9C556]
Interseasonal RSV infections in Switzerland - rapid establishment of a clinician-led national reporting system (RSV EpiCH).
von Hammerstein A.L., Aebi C., Barbey F., Berger C., Buettcher M., Casaulta C., Egli A., Gebauer M., Guerra B., Kahlert C. et al., 2021/08/30. Swiss medical weekly, 151 pp. w30057. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_063E2ED6F072]
Bacterial surface properties influence the activity of the TAT-RasGAP<sub>317-326</sub> antimicrobial peptide.
Georgieva M., Heinonen T., Vitale A., Hargraves S., Causevic S., Pillonel T., Eberl L., Widmann C., Jacquier N., 2021/08/20. iScience, 24 (8) p. 102923. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_CFDC3784C69E]
 
Pneumocystis Mating-Type Locus and Sexual Cycle during Infection.
Hauser P.M., 2021/08/18. Microbiology and molecular biology reviews, 85 (3) pp. e0000921. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D52AB688888C]
 
KPC-Mediated Resistance to Ceftazidime-Avibactam and Collateral Effects in Klebsiella pneumoniae.
Findlay J., Poirel L., Juhas M., Nordmann P., 2021/08/17. Antimicrobial agents and chemotherapy, 65 (9) pp. e0089021. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_5A55D8A3FDAC]
 
Occurrence of Aztreonam-Avibactam-Resistant NDM-5-Producing Escherichia coli in the Food Chain.
Sadek M., Poirel L., Nordmann P., 2021/08/17. Antimicrobial agents and chemotherapy, 65 (9) pp. e0088221. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2D8C0A9444B4]
A high-throughput cell- and virus-free assay shows reduced neutralization of SARS-CoV-2 variants by COVID-19 convalescent plasma.
Fenwick C., Turelli P., Pellaton C., Farina A., Campos J., Raclot C., Pojer F., Cagno V., Nusslé S.G., D'Acremont V. et al., 2021/08/04. Science translational medicine, 13 (605) pp. eabi8452. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_DB7C1B80A401]
Performance evaluation of the Becton Dickinson Kiestra™ IdentifA/SusceptA.
Jacot D., Sarton-Lohéac G., Coste A.T., Bertelli C., Greub G., Prod'hom G., Croxatto A., 2021/08. Clinical microbiology and infection, 27 (8) pp. 1167.e9-1167.e17. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_85C11972FFBD]
Performance of RT-PCR on Saliva Specimens Compared With Nasopharyngeal Swabs for the Detection of SARS-CoV-2 in Children: A Prospective Comparative Clinical Trial.
Fougère Y., Schwob J.M., Miauton A., Hoegger F., Opota O., Jaton K., Brouillet R., Greub G., Genton B., Gehri M. et al., 2021/08/01. The Pediatric infectious disease journal, 40 (8) pp. e300-e304. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_420EB68B8459]
 
Rapid ESBL NP Test for Rapid Detection of Expanded-Spectrum β-Lactamase Producers in Enterobacterales.
Demord A., Poirel L., D'Emidio F., Pomponio S., Nordmann P., 2021/08. Microbial drug resistance, 27 (8) pp. 1131-1135. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F905EF88579D]
HIV Modifies the m6A and m5C Epitranscriptomic Landscape of the Host Cell
Cristinelli Sara, Angelino Paolo, Janowczyk Andrew, Delorenzi Mauro, Ciuffi Angela, 2021/07/21. Frontiers in Virology, 1. Peer-reviewed.
[URN][DOI][serval:BIB_4F8E70273355]
 
Insights in the molecular mechanisms of an azole stress adapted laboratory-generated Aspergillus fumigatus strain.
Aruanno M., Gozel S., Mouyna I., Parker J.E., Bachmann D., Flamant P., Coste A.T., Sanglard D., Lamoth F., 2021/07/14. Medical mycology, 59 (8) pp. 763-772. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_B19CC367C75B]
Épidémiologie de COVID-19 et vaccination : étude de modélisation.
Meylan P., 2021/07/14. Revue medicale suisse, 17 (745) p. 1336. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_DD21D9888E51]
Methylene Blue has a potent antiviral activity against SARS-CoV-2 and H1N1 influenza virus in the absence of UV-activation in vitro.
Cagno V., Medaglia C., Cerny A., Cerny T., Zwygart A.C., Cerny E., Tapparel C., 2021/07/12. Scientific reports, 11 (1) p. 14295. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B5A1C7ABFC3D]
 
The Protein Kinase Receptor Modulates the Innate Immune Response against Tacaribe Virus.
Moreno H., Kunz S., 2021/07/07. Viruses, 13 (7) p. 1313. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DDE7FC2B15A6]
SARS-CoV-2 seroprevalence in healthcare workers of a Swiss tertiary care centre at the end of the first wave: a cross-sectional study.
Meylan S., Dafni U., Lamoth F., Tsourti Z., Lobritz M.A., Regina J., Bressin P., Senn L., Grandbastien B., Andre C. et al., 2021/07/05. BMJ open, 11 (7) pp. e049232. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_471F833F0211]
Limited Index of Clinical Suspicion and Underdiagnosis of Histopathologically Documented Invasive Mold Infections.
Caudron de Coquereaumont G., Couchepin J., Perentes J.Y., Krueger T., Lovis A., Rotman S., Lamoth F., 2021/07. Open forum infectious diseases, 8 (7) pp. ofab174. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_5A84A71FF9C5]
Prevalence of multidrug-resistant bacteria colonisation among asylum seekers in western Switzerland.
Kenfak-Foguena A., Nahimana Tessemo I., Bertelli C., Merz L., Cometta A., Blanc D., Senn L., Petignat C., 2021/07. Journal of infection prevention, 22 (4) pp. 173-176. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EC1FBBB6B9E2]
 
Prevalence of SARS-CoV-2 in Household Members and Other Close Contacts of COVID-19 Cases: A Serologic Study in Canton of Vaud, Switzerland.
Dupraz J., Butty A., Duperrex O., Estoppey S., Faivre V., Thabard J., Zuppinger C., Greub G., Pantaleo G., Pasquier J. et al., 2021/07. Open forum infectious diseases, 8 (7) pp. ofab149. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_FDA752E9104B]
Recommendations for accurate genotyping of SARS-CoV-2 using amplicon-based sequencing of clinical samples.
Kubik S., Marques A.C., Xing X., Silvery J., Bertelli C., De Maio F., Pournaras S., Burr T., Duffourd Y., Siemens H. et al., 2021/07. Clinical microbiology and infection, 27 (7) pp. 1036.e1-1036.e8. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_75886C076965]
The dark side of SARS-CoV-2 rapid antigen testing: screening asymptomatic patients.
Caruana G., Lebrun L.L., Aebischer O., Opota O., Urbano L., de Rham M., Marchetti O., Greub G., 2021/07. New microbes and new infections, 42 p. 100899. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B2C6AA99CFBC]
 
Antiviral Efficacy of Ribavirin and Favipiravir against Hantaan Virus.
Mayor J., Engler O., Rothenberger S., 2021/06/15. Microorganisms, 9 (6) p. 1306. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_79BF1AA9A2FD]
 
Viruses Like Sugars: How to Assess Glycan Involvement in Viral Attachment.
Mathez G., Cagno V., 2021/06/07. Microorganisms, 9 (6) p. 1238. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_788AE754DF9C]
Invasive Hormographiella aspergillata infection in patients with acute myeloid leukemia: Report of two cases successfully treated and review of the literature.
Tschopp J., Perentes J.Y., Beigelman-Aubry C., Berezowska S., Lovis A., Spertini O., Bochud P.Y., Lamoth F., 2021/06. Medical mycology case reports, 32 pp. 68-72. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_723A4B6AD287]
MCR-like protein from Kosakonia sacchari, an environmental Enterobacterales.
Fournier C., Palmieri M., Kieffer N., Nordmann P., Poirel L., 2021/06. Journal of global antimicrobial resistance, 25 pp. 339-340. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9BAE066D09D1]
Microbiota and Metabolite Modifications after Dietary Exclusion of Dairy Products and Reduced Consumption of Fermented Food in Young and Older Men.
Kim J., Burton-Pimentel K.J., Fleuti C., Blaser C., Scherz V., Badertscher R., Marmonier C., Lyon-Belgy N., Caille A., Pidou V. et al., 2021/06/01. Nutrients, 13 (6) p. 1905. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D899D602E144]
The antimicrobial peptide TAT-RasGAP<sub>317-326</sub> inhibits the formation and expansion of bacterial biofilms in vitro.
Heinonen T., Hargraves S., Georgieva M., Widmann C., Jacquier N., 2021/06. Journal of global antimicrobial resistance, 25 pp. 227-231. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_FBAF61CFF450]
 
Whipple disease: a 15-year retrospective study on 36 patients with positive polymerase chain reaction for Tropheryma whipplei.
Duss F.R., Jaton K., Vollenweider P., Troillet N., Greub G., 2021/06. Clinical microbiology and infection, 27 (6) pp. 910.e9-910.e13. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C192E275911F]
Self-testing for SARS-CoV-2: importance of lay communication.
Coste A.T., Egli A., Greub G., 2021/05/24. Swiss medical weekly, 151 pp. w20526. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A3FF3275F622]
 
False Immunological Detection of CTX-M Enzymes in Klebsiella oxytoca.
Ortiz de la Rosa J.M., Demord A., Poirel L., Greub G., Blanc D., Nordmann P., 2021/05/19. Journal of clinical microbiology, 59 (6) pp. e00609-21. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_42E5B2EFD0F6]
 
Rapid ResaImipenem/Acinetobacter NP Test for Detection of Carbapenem Susceptibility/Resistance in Acinetobacter baumannii.
Nordmann P., Sadek M., Tinguely C., Poirel L., 2021/05/19. Journal of clinical microbiology, 59 (6) pp. e03025-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_10AB41E1604D]
 
Antioxidant Molecules as a Source of Mitigation of Antibiotic Resistance Gene Dissemination.
Ortiz de la Rosa J.M., Nordmann P., Poirel L., 2021/05/18. Antimicrobial agents and chemotherapy, 65 (6) pp. e02658-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_17F04A03B2AE]
 
Does an Antibiotic Stewardship Applied in a Pig Farm Lead to Low ESBL Prevalence?
Fournier C., Nordmann P., Pittet O., Poirel L., 2021/05/13. Antibiotics, 10 (5). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4BAED199B135]
Impact of different SARS-CoV-2 assays on laboratory turnaround time.
Marquis B., Opota O., Jaton K., Greub G., 2021/05. Journal of medical microbiology, 70 (5). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_568573E3CB88]
 
Invasive Aspergillosis Due to Aspergillus Section Usti: A Multicenter Retrospective Study.
Glampedakis E., Cassaing S., Fekkar A., Dannaoui E., Bougnoux M.E., Bretagne S., Neofytos D., Schreiber P.W., Hennequin C., Morio F. et al., 2021/04/26. Clinical infectious diseases, 72 (8) pp. 1379-1385. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_102BDCBA5418]
Aequorin as a Useful Calcium-Sensing Reporter in Candida albicans.
Sanglard D., 2021/04/20. Journal of fungi, 7 (4) p. 319. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_991AC384C552]
 
Identification of Novel Antiviral Compounds Targeting Entry of Hantaviruses.
Mayor J., Torriani G., Engler O., Rothenberger S., 2021/04/16. Viruses, 13 (4) p. 685. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_CF22445F5B5E]
Infections invasives à Campylobacter [Invasive Campylobacter infections]
Donner V., Croxatto A., Tissot F., 2021/04/14. Revue medicale suisse, 17 (734) pp. 722-725. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_1E8EF2AC6BC0]
Transplantation de microbiote fécal : de l’évidence aux réalités du terrain [Fecal microbiota transplantation: from the evidence to the realty of the field]
Ballif A., Gerber S., Carrez L., Audry M., Sadeghipour F., Mitouassiwou A., Croxatto A., Opota O., Prod'hom G., Henchoz S. et al., 2021/04/14. Revue medicale suisse, 17 (734) pp. 726-731. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_6F57B9B68184]
 
Implementing SARS-CoV-2 Rapid Antigen Testing in the Emergency Ward of a Swiss University Hospital: The INCREASE Study.
Caruana G., Croxatto A., Kampouri E., Kritikos A., Opota O., Foerster M., Brouillet R., Senn L., Lienhard R., Egli A. et al., 2021/04/10. Microorganisms, 9 (4) p. 798. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0FC767B1B433]
Atypical hand, foot and mouth disease with eczematiform presentation in an adult patient.
Kritikos A., 2021/04. International journal of infectious diseases, 105 pp. 397-398. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_27E11E78D935]
SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing.
Goncalves Cabecinhas A.R., Roloff T., Stange M., Bertelli C., Huber M., Ramette A., Chen C., Nadeau S., Gerth Y., Yerly S. et al., 2021/03/25. Microorganisms, 9 (4) p. 677. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C7CA145091AD]
Invasive aspergillosis in solid organ transplant patients: diagnosis, prophylaxis, treatment, and assessment of response.
Neofytos D., Garcia-Vidal C., Lamoth F., Lichtenstern C., Perrella A., Vehreschild J.J., 2021/03/24. BMC infectious diseases, 21 (1) p. 296. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D96B6F63A459]
 
Assessment of the Role of 1,3-β-d-Glucan Testing for the Diagnosis of Invasive Fungal Infections in Adults.
Lamoth F., Akan H., Andes D., Cruciani M., Marchetti O., Ostrosky-Zeichner L., Racil Z., Clancy C.J., 2021/03/12. Clinical infectious diseases, 72 (Suppl 2) pp. S102-S108. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_309237C62F3D]
 
Guidance on Imaging for Invasive Pulmonary Aspergillosis and Mucormycosis: From the Imaging Working Group for the Revision and Update of the Consensus Definitions of Fungal Disease from the EORTC/MSGERC.
Alexander B.D., Lamoth F., Heussel C.P., Prokop C.S., Desai S.R., Morrissey C.O., Baddley J.W., 2021/03/12. Clinical infectious diseases, 72 (Suppl 2) pp. S79-S88. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A50B79E65CCB]
 
Conservation of the glycogen metabolism pathway underlines a pivotal function of storage polysaccharides in Chlamydiae.
Colpaert M., Kadouche D., Ducatez M., Pillonel T., Kebbi-Beghdadi C., Cenci U., Huang B., Chabi M., Maes E., Coddeville B. et al., 2021/03/05. Communications biology, 4 (1) p. 296. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_784BDEF3A2A4]
L’hémoculture est positive (vraiment ?) [Blood culture is positive (really?)]
Scotti C., Castioni J., Garnier A., Senn L., Greub G., Gachoud D., 2021/03/03. Forum médical suisse - Swiss Medical Forum, 21 (9-10) pp. 157-159. Peer-reviewed.
[URN][DOI][serval:BIB_1C6F6864E8A5]
 
Piperacillin/tazobactam selects an ampC derepressed E. cloacae complex mutant in a diabetic osteoarticular infection.
Moraz M., Bertelli C., Prod'hom G., Croxatto A., Greub G., Abou-Khalil S., Borens O., Meylan S., 2021/03. Clinical microbiology and infection, 27 (3) pp. 475-477. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_068E595B7DEB]
Rapid detection of carbapenemase-producing Pseudomonas spp. using the NitroSpeed-Carba NP test.
Sadek M., Poirel L., Nordmann P., 2021/03. Diagnostic microbiology and infectious disease, 99 (3) p. 115280. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F6062D3B3E1A]
Removal of pharmaceuticals from human urine during storage, aerobic biological treatment, and activated carbon adsorption to produce a safe fertilizer
Özel Duygan Birge D., Udert Kai M., Remmele Annette, McArdell Christa S., 2021/03. Resources, Conservation and Recycling, 166 p. 105341.
[URN][DOI][WoS][serval:BIB_BC2D5D5BB6EE]
SARS-CoV-2 ACE-receptor detection in the placenta throughout pregnancy.
Gengler C., Dubruc E., Favre G., Greub G., de Leval L., Baud D., 2021/03. Clinical microbiology and infection, 27 (3) pp. 489-490. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_363197A2C65B]
 
Performance of Existing Definitions and Tests for the Diagnosis of Invasive Fungal Diseases other than Invasive Candidiasis and Invasive Aspergillosis in Critically Ill, Adult Patients: A Systematic Review with Qualitative Evidence Synthesis.
Giacobbe D.R., Cortegiani A., Karaiskos I., Mercier T., Tejada S., Peghin M., Grecchi C., Rebuffi C., Asperges E., Zuccaro V. et al., 2021/02/28. Journal of fungi, 7 (3). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_617977024687]
 
Cross-Border Emergence of Escherichia coli Producing the Carbapenemase NDM-5 in Switzerland and Germany.
Chakraborty T., Sadek M., Yao Y., Imirzalioglu C., Stephan R., Poirel L., Nordmann P., 2021/02/18. Journal of clinical microbiology, 59 (3) pp. e02238-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_85FBE29EC5D2]
 
Efficacy of dual carbapenem treatment in a murine sepsis model of infection due to carbapenemase-producing Acinetobacter baumannii.
Cebrero-Cangueiro T., Nordmann P., Carretero-Ledesma M., Pachón J., Pachón-Ibáñez M.E., 2021/02/11. The Journal of antimicrobial chemotherapy, 76 (3) pp. 680-683. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6E2982EACB83]
Pathogenic Determinants of the Mycobacterium kansasii Complex: An Unsuspected Role for Distributive Conjugal Transfer.
Tagini F., Pillonel T., Bertelli C., Jaton K., Greub G., 2021/02/10. Microorganisms, 9 (2) p. 348. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B1DD26512429]
Assessing Biodegradability of Chemical Compounds from Microbial Community Growth Using Flow Cytometry.
Özel Duygan B.D., Rey S., Leocata S., Baroux L., Seyfried M., van der Meer J.R., 2021/02/09. mSystems, 6 (1) pp. e01143-20. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E4E8C7ED5B31]
Letter on "(1,3)-β-D-Glucan-based empirical antifungal interruption in suspected invasive candidiasis: a randomized trial".
Kritikos A., Lamoth F., 2021/02/09. Critical care, 25 (1) p. 55. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_155FE2BCB2B9]
Expression Pattern of the Pneumocystis jirovecii Major Surface Glycoprotein Superfamily in Patients with Pneumonia.
Schmid-Siegert E., Richard S., Luraschi A., Mühlethaler K., Pagni M., Hauser P.M., 2021/02/03. The Journal of infectious diseases, 223 (2) pp. 310-318. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9BC913CCDA6B]
 
Evaluation of the performance of rapid tests for screening carriers of acquired ESBL-producing Enterobacterales and their impact on turnaround time.
Blanc D.S., Poncet F., Grandbastien B., Greub G., Senn L., Nordmann P., 2021/02. The Journal of hospital infection, 108 pp. 19-24. Peer-reviewed.
[DOI][Pmid][serval:BIB_830AE303D4CA]
 
International Committee on Systematics of Prokaryotes (ICSP) Subcommittee on the taxonomy of Chlamydiae, minutes of the closed meeting, 10 September 2020, via Zoom.
Borel N., Greub G., 2021/02. International journal of systematic and evolutionary microbiology, 71 (2). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2CABDE393FD5]
Invasive Pulmonary Aspergillosis Goes Viral Again?
Wauters J., Lamoth F., Rijnders BJA, Calandra T., 2021/02/01. American journal of respiratory and critical care medicine, 203 (3) pp. 275-277. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_290519991FFF]
 
Lymphogranuloma Venereum Proctitis.
Kritikos A., Filippidis P., 2021/02/01. Sexually transmitted diseases, 48 (2) pp. e33. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1524DFFA5A47]
Puumala Virus Infection in Family, Switzerland.
Vetter P., L'Huillier A.G., Montalbano M.F., Pigny F., Eckerle I., Torriani G., Rothenberger S., Laubscher F., Cordey S., Kaiser L. et al., 2021/02. Emerging infectious diseases, 27 (2) pp. 658-660. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_7AD496E7E77A]
Clostridioides difficile Infection, Still a Long Way to Go.
Kampouri E., Croxatto A., Prod'hom G., Guery B., 2021/01/20. Journal of clinical medicine, 10 (3) pp. E389. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C51251BBC303]
Genomic Features of MCR-1 and Extended-Spectrum β-Lactamase-Producing Enterobacterales from Retail Raw Chicken in Egypt.
Sadek M., Ortiz de la Rosa J.M., Abdelfattah Maky M., Korashe Dandrawy M., Nordmann P., Poirel L., 2021/01/19. Microorganisms, 9 (1) p. 195. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_75D7D8AC2246]
Changes in SARS-CoV-2 Spike versus Nucleoprotein Antibody Responses Impact the Estimates of Infections in Population-Based Seroprevalence Studies.
Fenwick C., Croxatto A., Coste A.T., Pojer F., André C., Pellaton C., Farina A., Campos J., Hacker D., Lau K. et al., 2021/01/13. Journal of virology, 95 (3) pp. e01828-20. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_95BA21CCB9C1]
Camphor and Eucalyptol-Anticandidal Spectrum, Antivirulence Effect, Efflux Pumps Interference and Cytotoxicity.
Ivanov M., Kannan A., Stojković D.S., Glamočlija J., Calhelha R.C., Ferreira ICFR, Sanglard D., Soković M., 2021/01/06. International journal of molecular sciences, 22 (2) p. 483. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B7158D5FEC90]
Chlamydia pneumoniae and Mycoplasma pneumoniae in children with cystic fibrosis: impact on bacterial respiratory microbiota diversity.
Pittet L.F., Bertelli C., Scherz V., Rochat I., Mardegan C., Brouillet R., Jaton K., Mornand A., Kaiser L., Posfay-Barbe K. et al., 2021/01/06. Pathogens and disease, 79 (1) pp. ftaa074. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_ABE112806E5C]
Future challenges and chances in the diagnosis and management of invasive mould infections in cancer patients.
Vehreschild J.J., Koehler P., Lamoth F., Prattes J., Rieger C., Rijnders BJA, Teschner D., 2021/01/04. Medical mycology, 59 (1) pp. 93-101. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6C5F63C5F5B2]
 
An Automated Dashboard to Improve Laboratory COVID-19 Diagnostics Management.
Maury E., Boldi M.O., Greub G., Chavez V., Jaton K., Opota O., 2021. Frontiers in digital health, 3 p. 773986. Peer-reviewed.
[DOI][Pmid][serval:BIB_F755C62F731E]
Case Report: SARS-CoV-2 as an unexpected causal agent of predominant febrile hepatitis.
Filippidis P., van Ouwenaller F., Cerutti A., Geiger-Jacquod A., Sempoux C., Pantaleo G., Moradpour D., Lamoth F., 2021. F1000Research, 10 p. 400. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_0194C4870252]
Case Report: Stepwise Anti-Inflammatory and Anti-SARS-CoV-2 Effects Following Convalescent Plasma Therapy With Full Clinical Recovery.
Zimmerli A., Monti M., Fenwick C., Eckerle I., Beigelman-Aubry C., Pellaton C., Jaton K., Dumas D., Stamm G.M., Infanti L. et al., 2021. Frontiers in immunology, 12 p. 613502. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AE27E1EE2E3C]
Clinical severe acute respiratory syndrome coronavirus 2 isolation and antiviral testing.
Mathez G., Cagno V., 2021. Antiviral chemistry & chemotherapy, 29 p. 20402066211061063. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_EDDF0692C6BF]
 
Comparison of SARS-CoV-2 serological tests with different antigen targets.
Coste A.T., Jaton K., Papadimitriou-Olivgeris M., Greub G., Croxatto A., 2021/01. Journal of clinical virology, 134 p. 104690. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E2447F373497]
 
Computer-Aided Medical Microbiology Monitoring Tool: A Strategy to Adapt to the SARS-CoV-2 Epidemic and That Highlights RT-PCR Consistency.
Mueller L., Scherz V., Greub G., Jaton K., Opota O., 2021. Frontiers in cellular and infection microbiology, 11 p. 594577. Peer-reviewed.
[DOI][Pmid][serval:BIB_6B431B99FDA3]
Demographics and outcomes of hepatitis B and D: A 10-year retrospective analysis in a Swiss tertiary referral center.
Vieira Barbosa J., Sahli R., Aubert V., Chaouch A., Moradpour D., Fraga M., 2021. PloS one, 16 (4) pp. e0250347. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5339E3BF898D]
 
Editorial: Tuberculosis and Non-tuberculous Mycobacteria Infections: Control, Diagnosis and Treatment.
Opota O., Mazza-Stalder J., Viveiros M., Cambau E., Santin M., Goletti D., 2021. Frontiers in public health, 9 p. 666187. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D1B12026BB66]
 
Function Analysis of MBF1, a Factor Involved in the Response to Amino Acid Starvation and Virulence in Candida albicans.
Amorim-Vaz S., Coste A.T., Tran VDT, Pagni M., Sanglard D., 2021. Frontiers in fungal biology, 2 p. 658899. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_854842775929]
 
Hijacking Transposable Elements for Saturation Mutagenesis in Fungi.
Schrevens S., Sanglard D., 2021. Frontiers in fungal biology, 2 p. 633876. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_759E4530F3F0]
Transcriptomic Signature Differences Between SARS-CoV-2 and Influenza Virus Infected Patients.
Bibert S., Guex N., Lourenco J., Brahier T., Papadimitriou-Olivgeris M., Damonti L., Manuel O., Liechti R., Götz L., Tschopp J. et al., 2021. Frontiers in immunology, 12 p. 666163. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_91CEC9119F7E]
2020
Flavones, Flavonols, and Glycosylated Derivatives-Impact on Candida albicans Growth and Virulence, Expression of CDR1 and ERG11, Cytotoxicity.
Ivanov M., Kannan A., Stojković D.S., Glamočlija J., Calhelha R.C., Ferreira ICFR, Sanglard D., Soković M., 2020/12/30. Pharmaceuticals, 14 (1) pp. E27. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D9AE305B20C3]
Role and Interpretation of Antifungal Susceptibility Testing for the Management of Invasive Fungal Infections.
Lamoth F., Lewis R.E., Kontoyiannis D.P., 2020/12/30. Journal of fungi, 7 (1) pp. E17. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_62F309E67A3E]
 
Nested Species Distribution Models of Chlamydiales in Ixodes ricinus (Tick) Hosts in Switzerland.
Rochat E., Vuilleumier S., Aeby S., Greub G., Joost S., 2020/12/17. Applied and environmental microbiology, 87 (1) pp. e01237-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_353A655031DD]
Epidemiology of sexually transmitted infections among female sex workers in Switzerland: a local, exploratory, cross-sectional study
Vu F., Cavassini M., D'Acremont V., Greub G., Jaton K., Masserey E., Pongelli S., Bouche L., Ngarambe C., Bize R. et al., 2020/12/14. Swiss medical weekly, 150 pp. w20357. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C47E0DC75726]
Premiers résultats des études vaccinales de phase 3: le tournant ?
Meylan P., 2020/12/02. Revue medicale suisse, 16 (717) pp. 2354-2355. Peer-reviewed.
[URN][Pmid][serval:BIB_B710B4CB9EBC]
A novel circulating tamiami mammarenavirus shows potential for zoonotic spillover.
Moreno H., Rastrojo A., Pryce R., Fedeli C., Zimmer G., Bowden T.A., Gerold G., Kunz S., 2020/12. PLoS neglected tropical diseases, 14 (12) pp. e0009004. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E5381A9CAB35]
Genetic characterisation of NDM-1 and NDM-5-producing Enterobacterales from retail chicken meat in Egypt.
Sadek M., Poirel L., Nordmann P., Nariya H., Shimamoto T., Shimamoto T., 2020/12. Journal of global antimicrobial resistance, 23 pp. 70-71. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E942BF16FB05]
Incidence of invasive pulmonary aspergillosis among critically ill COVID-19 patients.
Lamoth F., Glampedakis E., Boillat-Blanco N., Oddo M., Pagani J.L., 2020/12. Clinical microbiology and infection, 26 (12) pp. 1706-1708. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_8331B09AD13F]
 
Pneumocystis jirovecii.
Nevez G., Hauser P.M., Le Gal S., 2020/12. Trends in microbiology, 28 (12) pp. 1034-1035. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DC8264B56D19]
Septic arthritis of the shoulder due to Ureaplasma urealyticum after emergency caesarean section: a case report
Mahlouly Jaad, Lhopitallier Loic, Suttels Véronique, Mueller Linda, Wernly Diane, Borens Olivier, Steinmetz Sylvain, 2020/12. BMC Infectious Diseases, 20 (1) p. 767. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_33AD2968AB07]
 
NGS-Based S. aureus Typing and Outbreak Analysis in Clinical Microbiology Laboratories: Lessons Learned From a Swiss-Wide Proficiency Test
Dylus David, Pillonel Trestan, Opota Onya, Wüthrich Daniel, Seth-Smith Helena M. B., Egli Adrian, Leo Stefano, Lazarevic Vladimir, Schrenzel Jacques, Laurent Sacha et al., 2020/11/24. Frontiers in Microbiology, 11. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_347E9A7AF57F]
Transcriptional Landscape of Waddlia chondrophila Aberrant Bodies Induced by Iron Starvation.
Ardissone S., Scherler A., Pillonel T., Martin V., Kebbi-Beghdadi C., Greub G., 2020/11/24. Microorganisms, 8 (12) p. 1848. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6602FA76FCAE]
Assessing the efficacy and impact of a personalised smoking cessation intervention among type 2 diabetic smokers: study protocol for an open-label randomised controlled trial (DISCGO-RCT).
Clair C., Augsburger A., Birrer P., Locatelli I., Schwarz J., Greub G., Zanchi A., Jacot-Sadowski I., Puder J.J., 2020/11/19. BMJ open, 10 (11) pp. e040117. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B8E00400B6EE]
 
Correction for Nordmann et al., "NitroSpeed-Carba NP Test for Rapid Detection and Differentiation between Different Classes of Carbapenemases in Enterobacterales".
Nordmann P., Sadek M., Demord A., Poirel L., 2020/11/18. Journal of clinical microbiology, 58 (12) pp. e02538-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_579027688413]
 
Correction for Sadek et al., "A Selective Culture Medium for Screening Ceftazidime-Avibactam Resistance in Enterobacterales and Pseudomonas aeruginosa".
Sadek M., Poirel L., Tinguely C., Nordmann P., 2020/11/18. Journal of clinical microbiology, 58 (12) pp. e02539-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0A4F5E73744E]
New Data on the In Vitro Activity of Fenticonazole against Fluconazole-Resistant Candida Species.
Cacaci M., Menchinelli G., Torelli R., Sanglard D., Sanguinetti M., Posteraro B., 2020/11/17. Antimicrobial agents and chemotherapy, 64 (12) pp. e01459-20. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D83563486F55]
 
Comparison of SARS-CoV-2 RT-PCR on a high-throughput molecular diagnostic platform and the cobas SARS-CoV-2 test for the diagnostic of COVID-19 on various clinical samples.
Opota O., Brouillet R., Greub G., Jaton K., 2020/11/11. Pathogens and disease, 78 (8) pp. ftaa061. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_50F61B3E6CFD]
Multisystem inflammatory syndrome with refractory cardiogenic shock due to acute myocarditis and mononeuritis multiplex after SARS-CoV-2 infection in an adult.
Othenin-Girard A., Regamey J., Lamoth F., Horisberger A., Glampedakis E., Epiney J.B., Kuntzer T., de Leval L., Carballares M., Hurni C.A. et al., 2020/11/02. Swiss medical weekly, 150 pp. w20387. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_135A96CD7E72]
 
C-terminal tails mimicking bioactive intermediates cause different plasma degradation patterns and kinetics in neuropeptides γ-MSH, α-MSH, and neurotensin.
Palazzi L., Pasquato A., Vicario M., Roulin A., Polverino de Laureto P., Cendron L., 2020/11. Journal of peptide science, 26 (11) pp. e3279. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D2B087BDB61E]
Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform.
Sadek M., Demord A., Poirel L., Nordmann P., 2020/11. Diagnostic microbiology and infectious disease, 98 (3) p. 115127. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_0D8372955A23]
 
Universal admission screening strategy for COVID-19 highlighted the clinical importance of reporting SARS-CoV-2 viral loads.
Moraz M., Jacot D., Papadimitriou-Olivgeris M., Senn L., Greub G., Jaton K., Opota O., 2020/11. New microbes and new infections, 38 p. 100820. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C560AB96A04F]
Vertical transmission and materno-fetal outcomes in 13 patients with coronavirus disease 2019.
Masmejan S., Pomar L., Favre G., Panchaud A., Giannoni E., Greub G., Baud D., 2020/11. Clinical microbiology and infection, 26 (11) pp. 1585-1587. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_96AF31F294C4]
Myiases d’ici et d’ailleurs : pseudo-furonculose et bactériémie à Ignatzschineria larvae [Myases from here and elsewhere : pseudo-furonculosis and Ignatzschineria larvae bacteremia]
Berthod D., Duss F.R., Palazzuolo M., Eyer M., Onya O., Aellen S., Bettschart V., Schmid T., Greub G., Troillet N., 2020/10/14. Revue medicale suisse, 16 (710) pp. 1932-1936. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_BF0186BF9338]
Diagnosis of Breakthrough Fungal Infections in the Clinical Mycology Laboratory: An ECMM Consensus Statement.
Jenks J.D., Gangneux J.P., Schwartz I.S., Alastruey-Izquierdo A., Lagrou K., Thompson Iii G.R., Lass-Flörl C., Hoenigl M., European Confederation of Medical Mycology (ECMM) Council Investigators, 2020/10/11. Journal of fungi, 6 (4). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_561A87B88814]
Bonne réaction des personnes âgées au vaccin anti-Covid mRNA-1273 (Moderna).
Meylan P., 2020/10/07. Revue medicale suisse, 16 (709) p. 1895. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_5F2C52EAB63E]
 
COVID-19 Pandemics: A Surprising Link to Bread Flour With Collateral Damage to a Prosthetic Heart Valve.
Tozzi P., Kampouri E.E., Tzimas G., Prior J.O., Monney P., Kamani C., Lamoth F., 2020/10. Circulation. Cardiovascular imaging, 13 (10) pp. e011395. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6AAEE9B61C26]
 
Digital microbiology.
Egli A., Schrenzel J., Greub G., 2020/10. Clinical microbiology and infection, 26 (10) pp. 1324-1331. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AFF7F611334C]
Emerging echinocandin-resistant Candida albicans and glabrata in Switzerland.
Coste A.T., Kritikos A., Li J., Khanna N., Goldenberger D., Garzoni C., Zehnder C., Boggian K., Neofytos D., Riat A. et al., 2020/10. Infection, 48 (5) pp. 761-766. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EF468599D088]
Implementation and evaluation of methods for the optimal detection of carbapenem-resistant and colistin-resistant Pseudomonas aeruginosa and Acinetobacter baumannii from stools.
Fournier C., Poirel L., Nordmann P., 2020/10. Diagnostic microbiology and infectious disease, 98 (2) p. 115121. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_75797BC41BD4]
Serum antibody response in critically ill patients with COVID-19.
Longchamp A., Longchamp J., Croxatto A., Greub G., Sanchez B., Delaloye J., Study Group, 2020/10. Intensive care medicine, 46 (10) pp. 1921-1923. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B7AF91220C37]
 
Tracking the origin and evolution of multidrug resistance in Candida auris.
Papon N., Sanglard D., 2020/10. The Lancet. Microbe, 1 (6) pp. e237. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E586CD314F65]
Single-Cell Analysis Reveals Heterogeneity of Virus Infection, Pathogenicity, and Host Responses: HIV as a Pioneering Example.
Brandt L., Cristinelli S., Ciuffi A., 2020/09/29. Annual review of virology, 7 (1) pp. 333-350. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_DB4C338CA91C]
Revision and Update of the Consensus Definitions of Invasive Fungal Disease From the European Organization for Research and Treatment of Cancer and the Mycoses Study Group Education and Research Consortium
Donnelly J Peter, Chen Sharon C, Kauffman Carol A, Steinbach William J, Baddley John W, Verweij Paul E, Clancy Cornelius J, Wingard John R, Lockhart Shawn R, Groll Andreas H et al., 2020/09/12. Clinical Infectious Diseases, 71 (6) pp. 1367-1376. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6E65A6649EFA]
 
A proopiomelanocortin-derived peptide sequence enhances plasma stability of peptide drugs.
Löw K., Roulin A., Kunz S., 2020/09. FEBS letters, 594 (17) pp. 2840-2866. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DF5744688599]
Diagnostic strategies for SARS-CoV-2 infection and interpretation of microbiological results.
Caruana G., Croxatto A., Coste A.T., Opota O., Lamoth F., Jaton K., Greub G., 2020/09. Clinical microbiology and infection, 26 (9) pp. 1178-1182. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EB349E4D572A]
Epidemiology of extended-spectrum β-lactamase-producing Enterobacteriaceae among healthcare students, at the Portuguese Red Cross Health School of Lisbon, Portugal.
Fournier C., Aires de Sousa M., Fuster Escriva B., Sales L., Nordmann P., Poirel L., 2020/09. Journal of global antimicrobial resistance, 22 pp. 733-737. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F6335C68D02F]
 
High prevalence of peribronchial focal lesions of airway invasive aspergillosis in hematological cancer patients with prolonged neutropenia.
Casutt A., Couchepin J., Brunel A.S., Lovis A., Bochud P.Y., Keller N., Lamoth F., Beigelman-Aubry C., 2020/09/01. The British journal of radiology, 93 (1113) p. 20190693. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0779912D40B1]
 
Impact de l'immunosuppression sur le traitement de l'infection à Clostridioides difficile
Kampouri E., Galpérine K.T., Croxatto A., Papadimitriou-Olivgeris M., Guery B., 2020/09. Médecine et Maladies Infectieuses, 50 (6) pp. S125.
[DOI][serval:BIB_4DF82C23778D]
 
Incidentally discovered COVID-19 pneumonia: the role of diagnostic imaging.
Pozzessere C., Rotzinger D.C., Ghaye B., Lamoth F., Beigelman-Aubry C., 2020/09. European radiology, 30 (9) pp. 5211-5213. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_98DE1603D705]
 
Progressive multifocal leukoencephalopathy responsive to withdrawal of imatinib in a patient with FIP1L1-PDGFRA positive myeloid neoplasm.
Blum S., Dunet V., Comoli P., Tirefort Y., Chalandon Y., Opota O., Comte D., Spertini O., Livio F., Brouland J.P. et al., 2020/09. Leukemia & lymphoma, 61 (9) pp. 2226-2229. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_13EB95E6B61C]
 
Rapid Polymyxin/Pseudomonas NP test for rapid detection of polymyxin susceptibility/resistance in Pseudomonas aeruginosa.
Sadek M., Tinguely C., Poirel L., Nordmann P., 2020/09. European journal of clinical microbiology & infectious diseases, 39 (9) pp. 1657-1662. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9CACBEB7AEE9]
 
A Selective Culture Medium for Screening Ceftazidime-Avibactam Resistance in Enterobacterales and Pseudomonas aeruginosa.
Sadek M., Poirel L., Tinguely C., Nordmann P., 2020/08/24. Journal of clinical microbiology, 58 (9) pp. e00965-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_3A49BFA7551F]
 
NitroSpeed-Carba NP Test for Rapid Detection and Differentiation between Different Classes of Carbapenemases in Enterobacterales.
Nordmann P., Sadek M., Demord A., Poirel L., 2020/08/24. Journal of clinical microbiology, 58 (9) pp. e00932-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1E0AA92BA28E]
 
First Genomic Characterization of blaVIM-1 and mcr-9-Coharbouring Enterobacter hormaechei Isolated from Food of Animal Origin
Sadek M., Nariya H., Shimamoto T., Kayama S., Yu L., Hisatsune J., Sugai M., Nordmann P., Poirel L., Shimamoto T., 2020/08/22. Pathogens, 9 (9). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AD3BE2AA2E19]
Signaling Pathways Governing the Caspofungin Paradoxical Effect in Aspergillus fumigatus.
Papon N., Morio F., Sanglard D., 2020/08/18. mBio, 11 (4) pp. e01816-20. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B08B776E274F]
Insights into Mobile Genetic Elements of the Biocide-Degrading Bacterium Pseudomonas nitroreducens HBP-1.
Carraro N., Sentchilo V., Polák L., Bertelli C., van der Meer J.R., 2020/08/12. Genes, 11 (8) p. 930. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_206C29759190]
 
The Role of Receptor Tyrosine Kinases in Lassa Virus Cell Entry.
Fedeli C., Moreno H., Kunz S., 2020/08/06. Viruses, 12 (8) p. 857. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0890880EB936]
Mutation dans la protéine Spike de SARS-CoV-2.
Meylan P., 2020/08/05. Revue medicale suisse, 16 (701) p. 1470. Peer-reviewed.
[URN][Pmid][serval:BIB_5E505131FCB1]
Genome sequencing of Mycobacterium tuberculosis clinical isolates revealed isoniazid resistance mechanisms undetected by conventional molecular methods.
Laurent S., Zakham F., Bertelli C., Merz L., Nicod L., Mazza-Stalder J., Greub G., Jaton K., Opota O., 2020/08. International journal of antimicrobial agents, 56 (2) p. 106068. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_81020030909E]
Conidiobolus pachyzygosporus invasive pulmonary infection in a patient with acute myeloid leukemia: case report and review of the literature.
Stavropoulou E., Coste A.T., Beigelman-Aubry C., Letovanec I., Spertini O., Lovis A., Krueger T., Burger R., Bochud P.Y., Lamoth F., 2020/07/22. BMC infectious diseases, 20 (1) p. 527. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_8DBE542AD411]
 
KPC-50 Confers Resistance to Ceftazidime-Avibactam Associated with Reduced Carbapenemase Activity.
Poirel L., Vuillemin X., Juhas M., Masseron A., Bechtel-Grosch U., Tiziani S., Mancini S., Nordmann P., 2020/07/22. Antimicrobial agents and chemotherapy, 64 (8) pp. e00321-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8D7D3E68F6EB]
Collapsing glomerulopathy in a COVID-19 patient.
Kissling S., Rotman S., Gerber C., Halfon M., Lamoth F., Comte D., Lhopitallier L., Sadallah S., Fakhouri F., 2020/07. Kidney international, 98 (1) pp. 228-231. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_251429356BF9]
Ongoing dissemination of OXA-244 carbapenemase-producing Escherichia coli in Switzerland and their detection.
Masseron A., Poirel L., Falgenhauer L., Imirzalioglu C., Kessler J., Chakraborty T., Nordmann P., 2020/07. Diagnostic microbiology and infectious disease, 97 (3) p. 115059. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_CA7B924CBC15]
 
Performance of existing definitions and tests for the diagnosis of invasive aspergillosis in critically ill, adult patients: A systematic review with qualitative evidence synthesis
Bassetti M., Giacobbe D.R., Grecchi C., Rebuffi C., Zuccaro V., Scudeller L., Akova M., Alastruey-Izquierdo A., Arikan-Akdagli S., Azoulay E. et al., 2020/07. Journal of Infection, 81 (1) pp. 131-146.
[DOI][WoS][Pmid][serval:BIB_2A39F40A3E05]
Venous thromboembolism in critically Ill patients with COVID-19: Results of a screening study for deep vein thrombosis.
Longchamp A., Longchamp J., Manzocchi-Besson S., Whiting L., Haller C., Jeanneret S., Godio M., Garcia Martinez J.J., Bonjour T., Caillat M. et al., 2020/07. Research and practice in thrombosis and haemostasis, 4 (5) pp. 842-847. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F213C2D7C2EC]
 
Prevalence and phylogeny of Chlamydiae and hemotropic mycoplasma species in captive and free-living bats.
Fritschi J., Marti H., Seth-Smith HMB, Aeby S., Greub G., Meli M.L., Hofmann-Lehmann R., Mühldorfer K., Stokar-Regenscheit N., Wiederkehr D. et al., 2020/06/26. BMC microbiology, 20 (1) p. 182. Peer-reviewed.
[DOI][Pmid][serval:BIB_094B169184C5]
 
Pathogenicity Genomic Island-Associated CrpP-Like Fluoroquinolone-Modifying Enzymes among Pseudomonas aeruginosa Clinical Isolates in Europe.
Ortiz de la Rosa J.M., Nordmann P., Poirel L., 2020/06/23. Antimicrobial agents and chemotherapy, 64 (7) pp. e00489-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_35BEFDFE832A]
 
Study protocol for the ABERRANT study: antibiotic-induced disruption of the maternal and infant microbiome and adverse health outcomes - a prospective cohort study among children born at term.
Volery M., Scherz V., Jakob W., Bandeira D., Deggim-Messmer V., Lauber-Biason A., Wildhaber J., Falquet L., Curtis N., Zimmermann P., 2020/06/23. BMJ open, 10 (6) pp. e036275. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_41FCE96DFE45]
Screening of Chlamydia trachomatis and Waddlia chondrophila Antibodies in Women with Tubal Factor Infertility.
van Dooremalen WTM, Verweij S.P., den Hartog J.E., Kebbi-Beghdadi C., Ouburg S., Greub G., Morré S.A., Ammerdorffer A., 2020/06/17. Microorganisms, 8 (6). Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_569FD47D696C]
 
SPHN/PHRT: Forming a Swiss-Wide Infrastructure for Data-Driven Sepsis Research.
Egli A., Battegay M., Büchler A.C., Bühlmann P., Calandra T., Eckert P., Furrer H., Greub G., Jakob S.M., Kaiser L. et al., 2020/06/16. Studies in health technology and informatics, 270 pp. 1163-1167. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DBFE87C40559]
Clinical Relevance and Characteristics of Aspergillus calidoustus and Other Aspergillus Species of Section Usti.
Glampedakis E., Erard V., Lamoth F., 2020/06/12. Journal of fungi, 6 (2). Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_3E8FE6BF70D1]
Second-Trimester Miscarriage in a Pregnant Woman With SARS-CoV-2 Infection.
Baud D., Greub G., Favre G., Gengler C., Jaton K., Dubruc E., Pomar L., 2020/06/02. JAMA, 323 (21) pp. 2198-2200. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AC7104A0B702]
 
Exploring the interactions between the human and viral genomes.
Fellay J., Pedergnana V., 2020/06. Human genetics, 139 (6-7) pp. 777-781. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_884272B1E6CF]
Single yeast cell nanomotions correlate with cellular activity.
Willaert RG, Vanden Boer P., Malovichko A., Alioscha-Perez M., Radotić K., Bartolić D., Kalauzi A., Villalba MI, Sanglard D., Dietler G. et al., 2020/06. Science advances, 6 (26) pp. eaba3139. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3C6EA13A3ECB]
 
Susceptibility to infection in early life: a growing role for human genetics.
Borghesi A., Marzollo A., Michev A., Fellay J., 2020/06. Human genetics, 139 (6-7) pp. 733-743. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F64BB0115109]
Wide spread of carbapenemase-producing bacterial isolates in a Nigerian environment.
Le Terrier C., Masseron A., Uwaezuoke N.S., Edwin C.P., Ekuma A.E., Olugbeminiyi F., Shettima S., Ushie S., Poirel L., Nordmann P., 2020/06. Journal of global antimicrobial resistance, 21 pp. 321-323. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_252F6E3BC34C]
SARS-CoV-2, un point dans la tourmente [SARS-CoV-2, a point in the storm]
Tadini E., Papamidimitriou-Olivgeris M., Opota O., Moulin E., Lamoth F., Manuel O., Lhopitallier L., Jaton K., Croxatto A., Grandbastien B. et al., 2020/05/06. Revue medicale suisse, 16 (692) pp. 917-923. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_88A8DA997C5D]
 
A phage-based decolonisation strategy against pan-resistant enterobacterial strains.
Poirel L., Nordmann P., de la Rosa JMO, Kutateladze M., Gatermann S., Corbellino M., 2020/05. The Lancet. Infectious diseases, 20 (5) pp. 525-526. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1DFEBD461173]
Ability of quantitative PCR to discriminate Pneumocystis jirovecii pneumonia from colonization.
Perret T., Kritikos A., Hauser P.M., Guiver M., Coste A.T., Jaton K., Lamoth F., 2020/05. Journal of medical microbiology, 69 (5) pp. 705-711. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_BFDF364602B9]
Evaluation of the BD Phoenix™ CPO Detect Test for the detection of carbapenemase producers.
Croxatto A., Coste A.T., Pillonel T., Bertelli C., Greub G., Prod'hom G., 2020/05. Clinical microbiology and infection, 26 (5) pp. 644.e9-644.e15. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_10B221FFC8D5]
Letter to the editor: SARS-CoV-2 detection by real-time RT-PCR.
Pillonel T., Scherz V., Jaton K., Greub G., Bertelli C., 2020/05. Euro surveillance, 25 (21). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E0264F85CE1E]
 
ISEcp1-Mediated Transposition Leads to Fosfomycin and Broad-Spectrum Cephalosporin Resistance in Klebsiella pneumoniae.
Kieffer N., Poirel L., Mueller L., Mancini S., Nordmann P., 2020/04/21. Antimicrobial agents and chemotherapy, 64 (5) pp. e00150-20. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_006C9C8E6CAA]
 
2020: A new year for Medical Mycology and medical mycologists.
Coste A., Imbert C., Hennequin C., 2020/04. Journal de mycologie medicale, 30 (1) p. 100937. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DADCB8903714]
Adaptation of Pseudomonas aeruginosa to constant sub-inhibitory concentrations of quaternary ammonium compounds
Voumard Margaux, Venturelli Leonardo, Borgatta Myriam, Croxatto Antony, Kasas Sandor, Dietler Giovanni, Breider Florian, von Gunten Urs, 2020/04. Environmental Science: Water Research & Technology, 6 (4) pp. 1139-1152. Peer-reviewed.
[URN][DOI][WoS][serval:BIB_60271FEFACB7]
 
Impact of the Beta-Glucan Test on Management of Intensive Care Unit Patients at Risk for Invasive Candidiasis
Kritikos Antonios, Poissy Julien, Croxatto Antony, Bochud Pierre-Yves, Pagani Jean-Luc, Lamoth Frederic, 2020/04/01. Journal of Clinical Microbiology, 58 (6) pp. e01996-19. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4BEDA4FB01DB]
 
Large-scale genome mining allows identification of neutral polymorphisms and novel resistance mutations in genes involved in Candida albicans resistance to azoles and echinocandins.
Sitterlé E., Coste A.T., Obadia T., Maufrais C., Chauvel M., Sertour N., Sanglard D., Puel A., D'Enfert C., Bougnoux M.E., 2020/04/01. The Journal of antimicrobial chemotherapy, 75 (4) pp. 835-848. Peer-reviewed.
[DOI][Pmid][serval:BIB_DE0060C0C427]
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