Microbiology

Publications | Phd and Masters theses

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2334 publications

... | 2020 | 2019 | 2018 | ...
2020
 
Occurrence of NDM-1-producing Morganella morganii and Proteus mirabilis in a single patient in Portugal: probable in vivo transfer by conjugation.
Aires-de-Sousa M., Ortiz de la Rosa J.M., Goncalves M.L., Costa A., Nordmann P., Poirel L., 2020/04/01. The Journal of antimicrobial chemotherapy, 75 (4) pp. 903-906. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_BB7F45E2D17A]
 
T-cell immunoglobulin and mucin (TIM) contributes to the infection of human airway epithelial cells by pseudotype viruses containing Hantaan virus glycoproteins.
Mayor J., Torriani G., Rothenberger S., Engler O., 2020/04. Virology, 543 pp. 54-62. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6F2371362B4E]
 
Characterization of FosL1, a Plasmid-Encoded Fosfomycin Resistance Protein Identified in Escherichia coli.
Kieffer N., Poirel L., Descombes M.C., Nordmann P., 2020/03/24. Antimicrobial agents and chemotherapy, 64 (4) pp. e02042-19. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_5209F44D41B1]
Risk factors for candidemia: a prospective matched case-control study.
Poissy J., Damonti L., Bignon A., Khanna N., Von Kietzell M., Boggian K., Neofytos D., Vuotto F., Coiteux V., Artru F. et al., 2020/03/18. Critical care, 24 (1) p. 109. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_A42B1C805146]
 
AB569, a nontoxic chemical tandem that kills major human pathogenic bacteria
McDaniel Cameron T., Panmanee Warunya, Winsor Geoffrey L., Gill Erin, Bertelli Claire, Schurr Michael J., Dongare Prateek, Paul Andrew T., Ko Seung-Hyun B., Lau Gee W. et al., 2020/03/03. Proceedings of the National Academy of Sciences.
[DOI][serval:BIB_4B3B35AD326E]
Draft genome sequence of an mcr-1/IncI2-carrying multidrug-resistant Escherichia coli B1:ST101 isolated from meat and meat products in Egypt.
Sadek M., Poirel L., Nordmann P., Nariya H., Shimamoto T., Shimamoto T., 2020/03. Journal of global antimicrobial resistance, 20 pp. 41-42. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_FE9455B792BE]
Performance of the T2Candida Panel for the Diagnosis of Intra-abdominal Candidiasis.
Lamoth F., Clancy C.J., Tissot F., Squires K., Eggimann P., Flückiger U., Siegemund M., Orasch C., Zimmerli S., Calandra T. et al., 2020/03. Open forum infectious diseases, 7 (3) pp. ofaa075. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_55AFFF4235BB]
 
Compassionate Use of Letermovir in a 2-Year-Old Immunocompromised Child With Resistant Cytomegalovirus Disease.
Pérez Marín M., Decosterd L.A., Andre P., Buclin T., Mercier T., Murray K., Rizzi M., Meylan P., Jaton-Ogay K., Opota O. et al., 2020/02/28. Journal of the Pediatric Infectious Diseases Society, 9 (1) pp. 96-99. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_34AA25DDD16D]
Immunosuppressed gardener pricked by roses grows Legionella longbeachae.
Desgranges F., Coste A.T., Wernly D., Dufour J., Opota O., Meylan S., 2020/02/22. Lancet, 395 (10224) p. 604. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7D8B58E9D82E]
Yeast Nanometric Scale Oscillations Highlights Fibronectin Induced Changes in C. albicans
Kohler AC, Venturelli L., Kannan A., Sanglard D., Dietler G., Willaert R., Kasas S., 2020/02/21. Fermentation, 6 (1) p. 28. Peer-reviewed.
[URN][DOI][WoS][serval:BIB_22BCD5E33544]
 
PFM-Like Enzymes Are a Novel Family of Subclass B2 Metallo-β-Lactamases from Pseudomonas synxantha Belonging to the Pseudomonas fluorescens Complex.
Poirel L., Palmieri M., Brilhante M., Masseron A., Perreten V., Nordmann P., 2020/01/27. Antimicrobial agents and chemotherapy, 64 (2) pp. e01700-19. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DD20E8636D5A]
Waddlia chondrophila and Male Infertility.
Baud D., Vulliemoz N., Zapata MVM, Greub G., Vouga M., Stojanov M., 2020/01/17. Microorganisms, 8 (1). Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_06CAADE40661]
Trimethylamine-N-Oxide Postprandial Response in Plasma and Urine Is Lower After Fermented Compared to Non-Fermented Dairy Consumption in Healthy Adults.
Burton K.J., Krüger R., Scherz V., Münger L.H., Picone G., Vionnet N., Bertelli C., Greub G., Capozzi F., Vergères G., 2020/01/16. Nutrients, 12 (1) p. 234. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_772166ABEA47]
VIH: prévention, traitement et perspectives [Novelties in HIV prevention and treatment in 2019]
Kampouri E., Papadimitriou-Olivgeris M., Calmy A., Ciuffi A., Cavassini M., 2020/01/15. Revue medicale suisse, 16 (676-7) pp. 92-98. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_3AE0F0E2F530]
Diverse Stress-Inducing Treatments cause Distinct Aberrant Body Morphologies in the Chlamydia-Related Bacterium, Waddlia chondrophila.
Scherler A., Jacquier N., Kebbi-Beghdadi C., Greub G., 2020/01/09. Microorganisms, 8 (1). Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_FFDE11682828]
ChlamDB: a comparative genomics database of the phylum Chlamydiae and other members of the Planctomycetes-Verrucomicrobiae-Chlamydiae superphylum.
Pillonel T., Tagini F., Bertelli C., Greub G., 2020/01/08. Nucleic acids research, 48 (D1) pp. D526-D534. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_60D235C6962F]
CAPNOCYTOPHAGA CANIMORSUS ENDOPHTHALMITIS AFTER CATARACT SURGERY LINKED TO SALIVARY DOG-TO-HUMAN TRANSMISSION.
Thommen F., Opota O., Greub G., Jaton K., Guex-Crosier Y., Wolfensberger T.J., Matet A., 2020. Retinal cases & brief reports, 14 (2) pp. 183-186. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_79ECF7D1096A]
 
Clinical bioinformatics for microbial genomics and metagenomics: an ESCMID Postgraduate Technical Workshop.
Greub G., Palagi P.M., Dylus D., Egli A., Pillonel T., Rossen JWA, Seth-Smith HMB, Lebrand A., ESGMD Study Group, 2020. Microbes and infection, 22 (10) pp. 626-634. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_806389DCE25C]
Combining Standard Molecular Typing and Whole Genome Sequencing to Investigate Pseudomonas aeruginosa Epidemiology in Intensive Care Units.
Magalhães B., Valot B., Abdelbary MMH, Prod'hom G., Greub G., Senn L., Blanc D.S., 2020. Frontiers in public health, 8 p. 3. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_D83F2D6A3BC0]
 
Comparison of Bioinformatics Pipelines and Operating Systems for the Analyses of 16S rRNA Gene Amplicon Sequences in Human Fecal Samples.
Marizzoni M., Gurry T., Provasi S., Greub G., Lopizzo N., Ribaldi F., Festari C., Mazzelli M., Mombelli E., Salvatore M. et al., 2020. Frontiers in microbiology, 11 p. 1262. Peer-reviewed.
[DOI][Pmid][serval:BIB_C28685E8F889]
 
Epidemiology, risk factors and clinical course of SARS-CoV-2 infected patients in a Swiss university hospital: An observational retrospective study.
Regina J., Papadimitriou-Olivgeris M., Burger R., Le Pogam M.A., Niemi T., Filippidis P., Tschopp J., Desgranges F., Viala B., Kampouri E. et al., 2020. PloS one, 15 (11) pp. e0240781. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_BE26AADAD401]
Identification and Characterization of Mediators of Fluconazole Tolerance in Candida albicans.
Delarze E., Brandt L., Trachsel E., Patxot M., Pralong C., Maranzano F., Chauvel M., Legrand M., Znaidi S., Bougnoux M.E. et al., 2020. Frontiers in microbiology, 11 p. 591140. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9965842F83CF]
Impact of Waddlia chondrophila infection on pregnancy in the mouse.
Baud D., Ammerdorffer A., Buffe Y., Vouga M., Greub G., Stojanov M., 2020/01. New microbes and new infections, 33 p. 100619. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_172D1E764896]
 
In-vitro evaluation of a dual carbapenem combination against carbapenemase-producing Acinetobacter baumannii.
Nordmann P., Perler J., Kieffer N., Poirel L., 2020/01. The Journal of infection, 80 (1) pp. 121-142. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_98993F0C342A]
 
Indication for SARS-CoV-2 serology: First month follow-up
T Coste Alix, Jaton Katia, Papadimitriou-Olivgeris Matthaios, Croxatto Antony, Greub Gilbert, 2020. Clinical Microbiology and Infectious Diseases, 5 (3).
[DOI][serval:BIB_C20336003AC6]
Molecular evolution of the proopiomelanocortin system in Barn owl species.
Löw K., Ducrest A.L., San-Jose L.M., Simon C., Uva V., Seidah N.G., Pasquato A., Kunz S., Roulin A., 2020. PloS one, 15 (5) pp. e0231163. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_31BFEB471ECA]
Neurologic complications of acute hepatitis E virus infection.
Ripellino P., Pasi E., Melli G., Staedler C., Fraga M., Moradpour D., Sahli R., Aubert V., Martinetti G., Bihl F. et al., 2020/01. Neurology, 7 (1) pp. e643. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7824310363C5]
 
Optimal detection of extended-spectrum β-lactamase producers, carbapenemase producers, polymyxin-resistant Enterobacterales, and vancomycin-resistant enterococci from stools.
Sadek M., Poirel L., Nordmann P., 2020/01. Diagnostic microbiology and infectious disease, 96 (1) p. 114919. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_71B75EBAB496]
Phylogeographical Analysis Reveals the Historic Origin, Emergence, and Evolutionary Dynamics of Methicillin-Resistant Staphylococcus aureus ST228.
Abdelbary MMH, Feil E.J., Senn L., Petignat C., Prod'hom G., Schrenzel J., François P., Werner G., Layer F., Strommenger B. et al., 2020. Frontiers in microbiology, 11 p. 2063. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E52BBB0E2952]
Predicting Venous Thromboembolic Events in Patients with Coronavirus Disease 2019 Requiring Hospitalization: an Observational Retrospective Study by the COVIDIC Initiative in a Swiss University Hospital.
Kampouri E., Filippidis P., Viala B., Méan M., Pantet O., Desgranges F., Tschopp J., Regina J., Karachalias E., Bianchi C. et al., 2020. BioMed research international, 2020 p. 9126148. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_458CAB0E5E15]
Revealing the astragalin mode of anticandidal action.
Ivanov M., Kannan A., Stojkovic D., Glamoclija J., Golic Grdadolnik S., Sanglard D., Sokovic M., 2020. EXCLI journal, 19 pp. 1436-1445. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C95265EEEFAC]
 
Symposium report: One Health meets sequencing.
Egli A., Koch D., Danuser J., Hendriksen R.S., Driesen S., Schmid D.C., Neher R., Mäusezahl M., Seth-Smith HMB, Bloemberg G. et al., 2020. Microbes and infection, 22 (1) pp. 1-7. Peer-reviewed.
[DOI][Pmid][serval:BIB_9E8E11A4C8CE]
Viral load of SARS-CoV-2 across patients and compared to other respiratory viruses.
Jacot D., Greub G., Jaton K., Opota O., 2020. Microbes and infection, 22 (10) pp. 617-621. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E9FEEDB7A5B4]
2019
 
Comparative Genomics for the Elucidation of Multidrug Resistance in Candida lusitaniae.
Kannan A., Asner S.A., Trachsel E., Kelly S., Parker J., Sanglard D., 2019/12/24. mBio, 10 (6). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_57D58253DDD1]
A predation assay using amoebae to screen for virulence factors unearthed the first W. chondrophila inclusion membrane protein.
Kebbi-Beghdadi C., Pilloux L., Croxatto A., Tosetti N., Pillonel T., Greub G., 2019/12/20. Scientific reports, 9 (1) p. 19485. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6614BD6EEDF2]
 
Gender medicine and oncology: report and consensus of an ESMO workshop.
Wagner A.D., Oertelt-Prigione S., Adjei A., Buclin T., Cristina V., Csajka C., Coukos G., Dafni U., Dotto G.P., Ducreux M. et al., 2019/12/01. Annals of oncology, 30 (12) pp. 1914-1924. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C7C76EA90383]
 
Global guideline for the diagnosis and management of mucormycosis: an initiative of the European Confederation of Medical Mycology in cooperation with the Mycoses Study Group Education and Research Consortium.
Cornely O.A., Alastruey-Izquierdo A., Arenz D., Chen SCA, Dannaoui E., Hochhegger B., Hoenigl M., Jensen H.E., Lagrou K., Lewis R.E. et al., 2019/12. The Lancet. Infectious diseases, 19 (12) pp. e405-e421. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_79ADD598DDAD]
 
The inoculum effect of Escherichia coli expressing mcr-1 or not on colistin activity in a murine model of peritonitis.
Fantin B., Poujade J., Grégoire N., Chau F., Roujansky A., Kieffer N., Berleur M., Couet W., Nordmann P., 2019/12. Clinical microbiology and infection, 25 (12) pp. 1563.e5-1563.e8. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_330C6B5A5105]
Interactions Screenings Unearth Potential New Divisome Components in the Chlamydia-Related Bacterium, Waddlia chondrophila.
Bayramova F., Jacquier N., Greub G., 2019/11/26. Microorganisms, 7 (12). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7D196437BE35]
 
Phenotypic, biochemical and genetic analysis of KPC-41, a KPC-3 variant conferring resistance to ceftazidime-avibactam and exhibiting reduced carbapenemase activity.
Mueller L., Masseron A., Prod'Hom G., Galperine T., Greub G., Poirel L., Nordmann P., 2019/11/21. Antimicrobial agents and chemotherapy, 63 (12) pp. e01111-19. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1ED69763A009]
Epidemiology and Diagnostics of Carbapenem Resistance in Gram-negative Bacteria.
Nordmann P., Poirel L., 2019/11/13. Clinical infectious diseases, 69 (Suppl 7) pp. S521-S528. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_4FCAFFEFF7A5]
 
A novel cell-based sensor detecting the activity of individual basic proprotein convertases.
Löw K., Hardes K., Fedeli C., Seidah N.G., Constam D.B., Pasquato A., Steinmetzer T., Roulin A., Kunz S., 2019/11. The FEBS journal, 286 (22) pp. 4597-4620. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_FB3BEDCEB392]
 
Evaluation of resazurin-based rapid test to detect colistin resistance in Acinetobacter baumannii isolates.
Germ J., Poirel L., Kisek T.C., Spik V.C., Seme K., Premru M.M., Zupanc T.L., Nordmann P., Pirs M., 2019/11. European journal of clinical microbiology & infectious diseases, 38 (11) pp. 2159-2162. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E9AF6BF79B2E]
Evaluation of three consecutive versions of a commercial rapid PCR test to screen for methicillin-resistant Staphylococcus aureus.
Bulliard E., Grandbastien B., Senn L., Greub G., Blanc D.S., 2019/11. Clinical microbiology and infection, 25 (11) pp. 1430.e1-1430.e4. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EC5E10DF321A]
 
Identification of FosA8, a Plasmid-Encoded Fosfomycin Resistance Determinant from Escherichia coli, and Its Origin in Leclercia adecarboxylata.
Poirel L., Vuillemin X., Kieffer N., Mueller L., Descombes M.C., Nordmann P., 2019/11. Antimicrobial agents and chemotherapy, 63 (11). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E96BA0462250]
 
International Committee on Systematics of Prokaryotes (ICSP) Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 20 March 2019, Seattle, WA, USA.
Borel N., Horn M., Greub G., 2019/11. International journal of systematic and evolutionary microbiology, 69 (11) pp. 3654-3656. Peer-reviewed.
[DOI][Pmid][serval:BIB_EC08A672E940]
Molecular characterization of multidrug-resistance in Gram-negative bacteria from the Peshawar teaching hospital, Pakistan.
Masseron A., Poirel L., Jamil Ali B., Syed M.A., Nordmann P., 2019/11. New microbes and new infections, 32 p. 100605. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_FBC212F1326C]
The rapid molecular test Xpert MTB/RIF ultra: towards improved tuberculosis diagnosis and rifampicin resistance detection.
Opota O., Mazza-Stalder J., Greub G., Jaton K., 2019/11. Clinical microbiology and infection, 25 (11) pp. 1370-1376. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AB65E37DF14D]
 
Therapeutic Challenges of Non-Aspergillus Invasive Mold Infections in Immunosuppressed Patients.
Lamoth F., Kontoyiannis D.P., 2019/11. Antimicrobial agents and chemotherapy, 63 (11). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DFF4349F2518]
 
Diarrhées secondaires à Clostridioides difficile
Collaud Sybile, Kraege Vanessa, Prodhom Guy, 2019/10/09. Forum Médical Suisse ‒ Swiss Medical Forum. Peer-reviewed.
[DOI][serval:BIB_C31C8584382C]
Added diagnostic value of 16S rRNA gene pan-mycobacterial PCR for nontuberculous mycobacterial infections: a 10-year retrospective study.
Andenmatten S., Onya O., Mazza-Stalder J., Nicod L., Gilbert G., Katia J., 2019/10. European journal of clinical microbiology & infectious diseases, 38 (10) pp. 1873-1881. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_1FCD4700BC84]
 
Comparison of the Innate Immune Responses to Pathogenic and Nonpathogenic Clade B New World Arenaviruses.
Moreno H., Möller R., Fedeli C., Gerold G., Kunz S., 2019/10/01. Journal of virology, 93 (19). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_BB5356F4F5D1]
Reply to Nevez and Le Gal, "Caspofungin and Pneumocystis Pneumonia: It Is Time To Go Ahead".
Luraschi A., Richard S., Hauser P.M., 2019/10. Antimicrobial agents and chemotherapy, 63 (10). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_540945A1DD09]
 
CTX-M-33, a CTX-M-15 derivative conferring reduced susceptibility to carbapenems.
Poirel L., Ortiz de la Rosa J.M., Richard A., Aires-de-Sousa M., Nordmann P., 2019/09/09. Antimicrobial agents and chemotherapy, 63 (12). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_B846DDF29D03]
 
mcr-9, an Inducible Gene Encoding an Acquired Phosphoethanolamine Transferase in Escherichia coli, and Its Origin.
Kieffer N., Royer G., Decousser J.W., Bourrel A.S., Palmieri M., Ortiz De La Rosa J.M., Jacquier H., Denamur E., Nordmann P., Poirel L., 2019/09. Antimicrobial agents and chemotherapy, 63 (9). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A285C60BFA62]
 
Successful treatment with daptomycin and ceftaroline of MDR Staphylococcus aureus native valve endocarditis: a case report.
Duss F.R., Garcia de la Mària C., Croxatto A., Giulieri S., Lamoth F., Manuel O., Miró J.M., 2019/09/01. The Journal of antimicrobial chemotherapy, 74 (9) pp. 2626-2630. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2B99F3F57E16]
Whole-genome sequencing for rapid, reliable and routine investigation of Mycobacterium tuberculosis transmission in local communities.
Zakham F., Laurent S., Esteves Carreira A.L., Corbaz A., Bertelli C., Masserey E., Nicod L., Greub G., Jaton K., Mazza-Stalder J. et al., 2019/09. New microbes and new infections, 31 p. 100582. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_604EC4A7CD3F]
 
HIV Transmission Chains Exhibit Greater HLA-B Homogeneity Than Randomly Expected.
Nguyen H., Thorball C.W., Fellay J., Böni J., Yerly S., Perreau M., Klimkait T., Kusejko K., Bachmann N., Chaudron S.E. et al., 2019/08/15. Journal of acquired immune deficiency syndromes, 81 (5) pp. 508-515. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6E0F5A3E41D4]
 
Echinocandins for the Treatment of Invasive Aspergillosis: from Laboratory to Bedside.
Aruanno M., Glampedakis E., Lamoth F., 2019/08. Antimicrobial agents and chemotherapy, 63 (8). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_5956AF923F85]
 
International Committee on Systematics of Prokaryotes (ICSP) Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 5 July 2018, Woudschoten, Zeist, The Netherlands.
Borel N., Greub G., 2019/08. International journal of systematic and evolutionary microbiology, 69 (8) pp. 2606-2608. Peer-reviewed.
[DOI][Pmid][serval:BIB_D076A6BCA06D]
 
Multiple colonization with carbapenem-resistant Gram-negative bacteria acquired in India and transferred to Switzerland.
Mueller L., Ottiger C., Demord A., Poirel L., Nordmann P., 2019/08. Infection, 47 (4) pp. 669-671. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0EAD5EFDFBF9]
 
Rapid immunochromatography-based detection of carbapenemase producers.
Kieffer N., Poirel L., Nordmann P., 2019/08. Infection, 47 (4) pp. 673-675. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1589A253CF53]
Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART.
Bachmann N., von Siebenthal C., Vongrad V., Turk T., Neumann K., Beerenwinkel N., Bogojeska J., Fellay J., Roth V., Kok Y.L. et al., 2019/07/19. Nature communications, 10 (1) p. 3193. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E1256C4C82EF]
A SpoIID Homolog Cleaves Glycan Strands at the Chlamydial Division Septum.
Jacquier N., Yadav A.K., Pillonel T., Viollier P.H., Cava F., Greub G., 2019/07/16. mBio, 10 (4). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F0458DD5EDF3]
Expression and Immunostaining Analyses Suggest that Pneumocystis Primary Homothallism Involves Trophic Cells Displaying Both Plus and Minus Pheromone Receptors.
Luraschi A., Richard S., Almeida JMGCF, Pagni M., Cushion M.T., Hauser P.M., 2019/07/09. mBio, 10 (4). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B682BB46A683]
Condition-specific series of metabolic sub-networks and its application for gene set enrichment analysis.
Tran VDT, Moretti S., Coste A.T., Amorim-Vaz S., Sanglard D., Pagni M., 2019/07/01. Bioinformatics, 35 (13) pp. 2258-2266. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3E96F1A1B541]
 
ESBLs and resistance to ceftazidime/avibactam and ceftolozane/tazobactam combinations in Escherichia coli and Pseudomonas aeruginosa.
Ortiz de la Rosa J.M., Nordmann P., Poirel L., 2019/07/01. The Journal of antimicrobial chemotherapy, 74 (7) pp. 1934-1939. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_755FB8B5A15E]
 
Functional Characterization of a Miniature Inverted Transposable Element at the Origin of mcr-5 Gene Acquisition in Escherichia coli.
Kieffer N., Nordmann P., Millemann Y., Poirel L., 2019/07. Antimicrobial agents and chemotherapy, 63 (7). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0E59C83B17BD]
Link between Heat Shock Protein 90 and the Mitochondrial Respiratory Chain in the Caspofungin Stress Response of Aspergillus fumigatus.
Aruanno M., Bachmann D., Sanglard D., Lamoth F., 2019/07. Antimicrobial agents and chemotherapy, 63 (7) pp. e00208-19.. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_27BC0FBB5DCD]
 
Candida auris, an emerging and disturbing yeast
Coste A.T., Imbert C., Hennequin C., 2019/06. Journal de Mycologie Médicale, 29 (2) pp. 105-106.
[DOI][WoS][Pmid][serval:BIB_FB7F4EE50B7A]
 
Increased Resistance to Carbapenems in Proteus mirabilis Mediated by Amplification of the bla<sub>VIM-1</sub>-Carrying and IS26-Associated Class 1 Integron.
Bontron S., Poirel L., Kieffer N., Savov E., Trifonova A., Todorova I., Kueffer G., Nordmann P., 2019/06. Microbial drug resistance, 25 (5) pp. 663-667. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_EEBEAEDE7BA4]
 
Isavuconazole brain penetration in cerebral aspergillosis.
Lamoth F., Mercier T., André P., Pagani J.L., Pantet O., Maduri R., Guery B., Decosterd L.A., 2019/06/01. The Journal of antimicrobial chemotherapy, 74 (6) pp. 1751-1753. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DBC07C267A48]
 
Phylogenomics reveal that Mycobacterium kansasii subtypes are species-level lineages. Description of Mycobacterium pseudokansasii sp. nov., Mycobacterium innocens sp. nov. and Mycobacterium attenuatum sp. nov.
Tagini F., Aeby S., Bertelli C., Droz S., Casanova C., Prod'hom G., Jaton K., Greub G., 2019/06. International journal of systematic and evolutionary microbiology, 69 (6) pp. 1696-1704. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9F91FAF18341]
Whole-genome sequencing revealed independent emergence of vancomycin-resistant Enterococcus faecium causing sequential outbreaks over 3 years in a tertiary care hospital.
Abdelbary MHH, Senn L., Greub G., Chaillou G., Moulin E., Blanc D.S., 2019/06. European journal of clinical microbiology & infectious diseases, 38 (6) pp. 1163-1170. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C455D61F96F6]
 
ZHO-1, an intrinsic MBL from the environmental Gram-negative species Zhongshania aliphaticivorans.
Kieffer N., Guzmán-Puche J., Poirel L., Kang H.J., Jeon C.O., Nordmann P., 2019/06/01. The Journal of antimicrobial chemotherapy, 74 (6) pp. 1568-1571. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C246876CE4FD]
 
Human miscarriage and infection in Tunisia: Role of Mycoplasma hominis and high Waddlia seroprevalence.
Smaoui M., Carole K., Sellami H., Kammoun S., Choura K., Maazoun L., Mestiri H., Aeby S., Louati D., Derbel M. et al., 2019/05/31. Journal of infection in developing countries, 13 (5) pp. 410-418. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DB998913DDCA]
 
Screening for Intestinal Carriage of Extended-spectrum Beta-lactamase-producing Enterobacteriaceae in Critically Ill Patients: Expected Benefits and Evidence-based Controversies.
Zahar J.R., Blot S., Nordmann P., Martischang R., Timsit J.F., Harbarth S., Barbier F., 2019/05/30. Clinical infectious diseases, 68 (12) pp. 2125-2130. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A0D0DAEA2D32]
Sofosbuvir add-on to ribavirin for chronic hepatitis E in a cirrhotic liver transplant recipient: a case report.
Fraga M., Gouttenoire J., Sahli R., Chtioui H., Marcu C., Pascual M., Moradpour D., Vionnet J., 2019/05/24. BMC gastroenterology, 19 (1) p. 76. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_10FD0B1931C2]
 
Macropinocytosis contributes to hantavirus entry into human airway epithelial cells.
Torriani G., Mayor J., Zimmer G., Kunz S., Rothenberger S., Engler O., 2019/05. Virology, 531 pp. 57-68. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E9A63758631C]
 
Performances of the Rapid Polymyxin Acinetobacter and Pseudomonas Tests for Colistin Susceptibility Testing.
Lescat M., Poirel L., Jayol A., Nordmann P., 2019/05. Microbial drug resistance, 25 (4) pp. 520-523. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_41D2E0F9C11D]
 
Prevalence of fosfomycin resistance among ESBL-producing Escherichia coli isolates in the community, Switzerland.
Mueller L., Cimen C., Poirel L., Descombes M.C., Nordmann P., 2019/05. European journal of clinical microbiology & infectious diseases, 38 (5) pp. 945-949. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_B9901ADE4BC6]
 
Rabbit HEV in immunosuppressed patients with hepatitis E acquired in Switzerland.
Sahli R., Fraga M., Semela D., Moradpour D., Gouttenoire J., 2019/05. Journal of hepatology, 70 (5) pp. 1023-1025. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_FAEA1D95D11D]
 
Impact of co-amoxicillin-resistant Escherichia coli and Pseudomonas aeruginosa on the rate of infectious complications in paediatric complicated appendicitis.
Andrey V., Crisinel P.A., Prod'hom G., Croxatto A., Joseph J.M., 2019/04/22. Swiss medical weekly, 149 pp. w20055. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_66A2FC8EACF0]
 
Developing definitions for invasive fungal diseases in critically ill adult patients in intensive care units. Protocol of the FUNgal infections Definitions in ICU patients (FUNDICU) project.
Bassetti M., Scudeller L., Giacobbe D.R., Lamoth F., Righi E., Zuccaro V., Grecchi C., Rebuffi C., Akova M., Alastruey-Izquierdo A. et al., 2019/04. Mycoses, 62 (4) pp. 310-319. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A6CB07C270A8]
 
Diagnostic approach to encephalitis and meningoencephalitis in adult returning travellers.
Kenfak A., Eperon G., Schibler M., Lamoth F., Vargas M.I., Stahl J.P., 2019/04. Clinical microbiology and infection, 25 (4) pp. 415-421. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_BC9C07578E92]
 
Human papilloma virus-associated squamous cell carcinoma of the larynx in an 18-year-old woman.
Hotz M.A., Christen B., Sahli R., Arnold A.M., 2019/04. Head & neck, 41 (4) pp. E59-E61. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2154763AADCF]
Molecular diagnosis and enrichment culture identified a septic pseudoarthrosis due to an infection with Erysipelatoclostridium ramosum.
Zakham F., Pillonel T., Brunel A.S., Zambelli P.Y., Greub G., Croxatto A., Bertelli C., 2019/04. International journal of infectious diseases, 81 pp. 167-169. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_DB839D64A53F]
Sequencing the Obligate Intracellular Rhabdochlamydia helvetica within Its Tick Host Ixodes ricinus to Investigate Their Symbiotic Relationship.
Pillonel T., Bertelli C., Aeby S., de Barsy M., Jacquier N., Kebbi-Beghdadi C., Mueller L., Vouga M., Greub G., 2019/04/01. Genome biology and evolution, 11 (4) pp. 1334-1344. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_396827229ADC]
Dynamic Dystroglycan Complexes Mediate Cell Entry of Lassa Virus.
Herrador A., Fedeli C., Radulovic E., Campbell K.P., Moreno H., Gerold G., Kunz S., 2019/03/26. mBio, 10 (2). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9EB89A24BE5D]
Entry of Polarized Effector Cells into Quiescence Forces HIV Latency.
Dobrowolski C., Valadkhan S., Graham A.C., Shukla M., Ciuffi A., Telenti A., Karn J., 2019/03/26. mBio, 10 (2). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3093A1E55E1C]
Erratum to: Clinical characteristics, audiological and neurodevelopmental outcomes of newborns with congenital cytomegalovirus infection.
Kobas M., Bickle Graz M., Truttmann A.C., Giannoni E., Meylan P., Asner S.A., 2019/03/25. Swiss medical weekly, 149 pp. w20075. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9A375D5BEEC0]
Identification of new DNA-associated proteins from Waddlia chondrophila.
Barsy M., Herrgott L., Martin V., Pillonel T., Viollier P.H., Greub G., 2019/03/20. Scientific reports, 9 (1) p. 4885. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7EC1BBAAC2B7]
 
Identification of Clotrimazole Derivatives as Specific Inhibitors of Arenavirus Fusion.
Torriani G., Trofimenko E., Mayor J., Fedeli C., Moreno H., Michel S., Heulot M., Chevalier N., Zimmer G., Shrestha N. et al., 2019/03/15. Journal of virology, 93 (6). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D5371F74AB92]
 
A Resazurin Reduction-Based Assay for Rapid Detection of Polymyxin Resistance in Acinetobacter baumannii and Pseudomonas aeruginosa.
Lescat M., Poirel L., Tinguely C., Nordmann P., 2019/03. Journal of clinical microbiology, 57 (3). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_14611B9C4DE7]
 
Diagnosis and treatment of invasive fungal infections: looking ahead.
Sanguinetti M., Posteraro B., Beigelman-Aubry C., Lamoth F., Dunet V., Slavin M., Richardson M.D., 2019/03/01. The Journal of antimicrobial chemotherapy, 74 (Supplement_2) pp. ii27-ii37. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DD93B62C73F3]
 
Diagnostic stewardship: are we using the right term?
Dyar O.J., Moran-Gilad J., Greub G., Pulcini C., ESGMD Executive Committee and the ESGAP Executive Committee, 2019/03. Clinical microbiology and infection, 25 (3) pp. 272-273. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8397F4F028F3]
 
Tatumella ptyseos Causing Human Sepsis: Report of the First Case in Switzerland and Review of the Literature
Bourlond Baudouin, Croxatto Antony, Donner Viviane, Prodhom Guy, Guery Benoit, 2019/03. SN Comprehensive Clinical Medicine, 1 (3) pp. 200-202.
[DOI][serval:BIB_F86863C8F2DF]
 
Supporting female scientists in Yemen.
Zakham F., Jaton K., 2019/02/09. Lancet, 393 (10171) pp. 526-527. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_26BC623ECC3E]
Added Value of Xpert MTB/RIF Ultra for Diagnosis of Pulmonary Tuberculosis in a Low-Prevalence Setting.
Opota O., Zakham F., Mazza-Stalder J., Nicod L., Greub G., Jaton K., 2019/02. Journal of clinical microbiology, 57 (2). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7A47A167126E]
 
Comment on: T2Candida MR as a predictor of outcome in patients with suspected invasive candidiasis starting empirical antifungal treatment: a prospective pilot study.
White P.L., Barnes R.A., Gorton R., Cruciani M., Loeffler J., Fungal PCR Initiative (Working Group of the International Society of Human and Animal Mycology), 2019/02/01. The Journal of antimicrobial chemotherapy, 74 (2) pp. 532-533. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8DE70665EBD4]
 
Comparison of analytical performances of the Roche Cobas 6800 CT/NG assay with the Abbott m2000 Real Time CT/NG assay for detecting Chlamydia trachomatis and Neisseria gonorrhoeae.
Cherkaoui A., Renzi G., Mombelli M., Jaton K., Yerly S., Vuilleumier N., Schrenzel J., 2019/02. Journal of medical microbiology, 68 (2) pp. 197-200. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_232EBDD8FD6C]
Human papillomavirus genotype distribution and socio-behavioural characteristics in women with cervical pre-cancer and cancer at the start of a human papillomavirus vaccination programme: the CIN3+ plus study.
Egli-Gany D., Spaar Zographos A., Diebold J., Masserey Spicher V., Frey Tirri B., Heusser R., Dillner J., Petignat P., Sahli R., Low N. et al., 2019/01/30. BMC cancer, 19 (1) p. 111. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5C2CE1B9A651]
Proteo-Transcriptomic Dynamics of Cellular Response to HIV-1 Infection.
Golumbeanu M., Desfarges S., Hernandez C., Quadroni M., Rato S., Mohammadi P., Telenti A., Beerenwinkel N., Ciuffi A., 2019/01/18. Scientific reports, 9 (1) p. 213. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_97FD3CF01470]
 
Nouveautés dans le dépistage, la prévention et la prise en charge du VIH en 2018 [Diagnosis, prevention and treatment of HIV : what's new in 2018 ?]
D'Incau S., Viala B., Ciuffi A., Cavassini M., Calmy A., 2019/01/09. Revue medicale suisse, 15 (N° 632-633) pp. 107-112. Peer-reviewed.
[Pmid][serval:BIB_0AAA6CA83143]
 
Acquisition of Extended-Spectrum β-Lactamase GES-6 Leading to Resistance to Ceftolozane-Tazobactam Combination in Pseudomonas aeruginosa.
Poirel L., Ortiz De La Rosa J.M., Kieffer N., Dubois V., Jayol A., Nordmann P., 2019/01. Antimicrobial agents and chemotherapy, 63 (1). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9DD0E482BDD8]
Characterization of PAN-1, a Carbapenem-Hydrolyzing Class B β-Lactamase From the Environmental Gram-Negative Pseudobacteriovorax antillogorgiicola.
Kieffer N., Poirel L., Fournier C., Haltli B., Kerr R., Nordmann P., 2019. Frontiers in microbiology, 10 p. 1673. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F089B9A8D284]
Effect of Fc Receptor Genetic Diversity on HIV-1 Disease Pathogenesis.
Geraghty D.E., Thorball C.W., Fellay J., Thomas R., 2019. Frontiers in immunology, 10 p. 970. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6AEAD24A0472]
 
ESCMID/ESGMD postgraduate technical workshop on diagnostic microbiology.
Scherler A., Ardissone S., Moran-Gilad J., Greub G., 2019. Microbes and infection, 21 (8-9) pp. 343-352. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8D3ACAB68B40]
Finding the needle in a haystack: Mapping antifungal drug resistance in fungal pathogen by genomic approaches.
Sanglard D., 2019/01. PLoS pathogens, 15 (1) pp. e1007478. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B2E3AC4AA2D0]
Improvement in Tuberculosis Outcomes With a Combined Medical and Social Approach.
Mazza-Stalder J., Chevallier E., Opota O., Carreira A., Jaton K., Masserey E., Zellweger J.P., Nicod L.P., 2019. Frontiers in medicine, 6 p. 135. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_11F402645AE4]
Indication of spatially random occurrence of <i>Chlamydia</i>-like organisms in <i>Bufo bufo</i> tadpoles from ponds located in the Geneva metropolitan area.
Vajana E., Widmer I., Rochat E., Duruz S., Selmoni O., Vuilleumier S., Aeby S., Greub G., Joost S., 2019/01. New microbes and new infections, 27 pp. 54-63. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_D0448B8AE745]
Investigating Antifungal Susceptibility in Candida Species With MALDI-TOF MS-Based Assays.
Delavy M., Dos Santos A.R., Heiman C.M., Coste A.T., 2019. Frontiers in cellular and infection microbiology, 9 p. 19. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_7E4799E9694B]
Is the unique camouflage strategy of Pneumocystis associated with its particular niche within host lungs?
Hauser P.M., 2019/01. PLoS pathogens, 15 (1) pp. e1007480. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3376441DF41C]
Machine Learning Approach for Candida albicans Fluconazole Resistance Detection Using Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry.
Delavy M., Cerutti L., Croxatto A., Prod'hom G., Sanglard D., Greub G., Coste A.T., 2019. Frontiers in microbiology, 10 p. 3000. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_8EF5D09A167E]
Persistence of Candida albicans in the Oral Mucosa Induces a Curbed Inflammatory Host Response That Is Independent of Immunosuppression.
Kirchner F.R., Littringer K., Altmeier S., Tran VDT, Schönherr F., Lemberg C., Pagni M., Sanglard D., Joller N., LeibundGut-Landmann S., 2019. Frontiers in immunology, 10 p. 330. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D64DED349677]
Prevalence of <i>Anaplasma phagocytophilum</i> and <i>Coxiella burnetii</i> in <i>Ixodes ricinus</i> ticks in Switzerland: an underestimated epidemiologic risk.
Pilloux L., Baumgartner A., Jaton K., Lienhard R., Ackermann-Gäumann R., Beuret C., Greub G., 2019/01. New microbes and new infections, 27 pp. 22-26. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_6BE9445528C8]
 
Prevalence of Anaplasma phagocytophilum and Coxiella burnetii in Ixodes ricinus ticks in Switzerland: an underestimated epidemiologic risk.
Pilloux L., Baumgartner A., Jaton K., Lienhard R., Ackermann-Gäumann R., Beuret C., Greub G., 2019/01. New microbes and new infections, 27 pp. 22-26. Peer-reviewed.
[DOI][Pmid][serval:BIB_766343C2D4CA]
 
Rapid Detection of Fosfomycin Resistance in Escherichia coli.
Nordmann P., Poirel L., Mueller L., 2019/01. Journal of clinical microbiology, 57 (1). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_BC4FC5CFE7BC]
Review of the impact of MALDI-TOF MS in public health and hospital hygiene, 2018.
Rodríguez-Sánchez B., Cercenado E., Coste A.T., Greub G., 2019/01. Euro surveillance, 24 (4). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D38550346899]
Review on Antifungal Resistance Mechanisms in the Emerging Pathogen Candida auris.
Chaabane F., Graf A., Jequier L., Coste A.T., 2019. Frontiers in microbiology, 10 p. 2788. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_12AA1B08BAC1]
The xyl-doc gene cluster of Ruminiclostridium cellulolyticum encodes GH43- and GH62-α-l-arabinofuranosidases with complementary modes of action.
Mroueh M., Aruanno M., Borne R., de Philip P., Fierobe H.P., Tardif C., Pagès S., 2019. Biotechnology for biofuels, 12 p. 144. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_0A67B4908CA9]
2018
Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform.
Egli A., Blanc D.S., Greub G., Keller P.M., Lazarevic V., Lebrand A., Leib S., Neher R.A., Perreten V., Ramette A. et al., 2018/12/03. Swiss medical weekly, 148 pp. w14693. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_185F2FAA4116]
 
Effect of renal clearance and continuous renal replacement therapy on appropriateness of recommended meropenem dosing regimens in critically ill patients with susceptible life-threatening infections.
Burger R., Guidi M., Calpini V., Lamoth F., Decosterd L., Robatel C., Buclin T., Csajka C., Marchetti O., 2018/12/01. The Journal of antimicrobial chemotherapy, 73 (12) pp. 3413-3422. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C826664F7442]
 
Efficacy of Antifungal Monotherapies and Combinations against Aspergillus calidoustus.
Glampedakis E., Coste A.T., Aruanno M., Bachmann D., Delarze E., Erard V., Lamoth F., 2018/12. Antimicrobial agents and chemotherapy, 62 (12). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_96BD38D42E6D]
 
Implications of the EUCAST Trailing Phenomenon in Candida tropicalis for the In Vivo Susceptibility in Invertebrate and Murine Models.
Astvad KMT, Sanglard D., Delarze E., Hare R.K., Arendrup M.C., 2018/12. Antimicrobial agents and chemotherapy, 62 (12). Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_2BAD0EA1E2E6]
Is sex necessary for the proliferation and transmission of Pneumocystis?
Hauser P.M., Cushion M.T., 2018/12. PLoS pathogens, 14 (12) pp. e1007409. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_DFBABAA75F07]
 
Rational approach in the management of Pseudomonas aeruginosa infections.
Bassetti M., Vena A., Russo A., Croxatto A., Calandra T., Guery B., 2018/12. Current opinion in infectious diseases, 31 (6) pp. 578-586. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_89903939D2F8]
Site-Directed Mutagenesis of the 1,3-β-Glucan Synthase Catalytic Subunit of Pneumocystis jirovecii and Susceptibility Assays Suggest Its Sensitivity to Caspofungin.
Luraschi A., Richard S., Hauser P.M., 2018/12. Antimicrobial agents and chemotherapy, 62 (12). Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_146F1DB3AA27]
 
Stability of cefiderocol against clinically significant broad-spectrum oxacillinases.
Poirel L., Kieffer N., Nordmann P., 2018/12. International journal of antimicrobial agents, 52 (6) pp. 866-867. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_803A346C17B2]
 
«Madame B. se comporte étrangement»
Kampouri Eleftheria, Sokolov Arseny, Anichini Angelica, Greub Gilbert, Croxatto Antony, Vollenweider Peter, Duss François-Regis, 2018/11/07. Forum Médical Suisse ‒ Swiss Medical Forum.
[DOI][serval:BIB_47AE58AE65C0]
 
Accuracy of Sensititre YeastOne echinocandins epidemiological cut-off values for identification of FKS mutant Candida albicans and Candida glabrata: a ten year national survey of the Fungal Infection Network of Switzerland (FUNGINOS).
Kritikos A., Neofytos D., Khanna N., Schreiber P.W., Boggian K., Bille J., Schrenzel J., Mühlethaler K., Zbinden R., Bruderer T. et al., 2018/11. Clinical microbiology and infection, 24 (11) pp. 1214.e1-1214.e4. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_CDB7569EE916]
Genomics and evolution of Pneumocystis species.
Cissé O.H., Hauser P.M., 2018/11. Infection, genetics and evolution, 65 pp. 308-320. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F2A3AE952B9F]
 
International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Chlamydiae. Minutes of the closed meeting, 7 September 2016, Oxford, UK.
Greub G., Bavoil P., 2018/11. International journal of systematic and evolutionary microbiology, 68 (11) pp. 3683-3684. Peer-reviewed.
[DOI][Pmid][serval:BIB_5426FEFE5887]
Limited added value of fungal ITS amplicon sequencing in the study of bovine abortion.
Vidal S., Brandt B.W., Dettwiler M., Abril C., Bressan J., Greub G., Frey C.F., Perreten V., Rodriguez-Campos S., 2018/11. Heliyon, 4 (11) pp. e00915. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_99A288391043]
 
Pentraxin-3 polymorphisms and invasive mold infections in acute leukemia patients receiving intensive chemotherapy.
Brunel A.S., Wójtowicz A., Lamoth F., Spertini O., Neofytos D., Calandra T., Marchetti O., Bochud P.Y., 2018/11. Haematologica, 103 (11) pp. e527-e530. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_57E679722B16]
 
β-Klotho deficiency shifts the gut-liver bile acid axis and induces hepatic alterations in mice.
Somm E., Henry H., Bruce S.J., Bonnet N., Montandon S.A., Niederländer N.J., Messina A., Aeby S., Rosikiewicz M., Fajas L. et al., 2018/11/01. American journal of physiology. Endocrinology and metabolism, 315 (5) pp. E833-E847. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4784D51A916B]
 
Staphylocoques dorés producteurs de leucocidine de Panton-Valentine : notions en pratique clinique [Staphylococcus aureus producing Panton-Valentine leukocidin : notions in clinical practice]
Pérez S., Liaudet A., Favrat B., Cornuz J., Greub G., 2018/10/31. Revue medicale suisse, 14 (625) pp. 1946-1950. Peer-reviewed.
[Pmid][serval:BIB_B2FDAEE1B037]
Host-pathogen biotic interactions shaped vitamin K metabolism in Archaeplastida.
Cenci U., Qiu H., Pillonel T., Cardol P., Remacle C., Colleoni C., Kadouche D., Chabi M., Greub G., Bhattacharya D. et al., 2018/10/15. Scientific reports, 8 (1) p. 15243. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_4A723C8DAA6B]
 
Detection of colistin-resistant Gram-negative rods by using the SuperPolymyxin medium.
Jayol A., Poirel L., André C., Dubois V., Nordmann P., 2018/10. Diagnostic microbiology and infectious disease, 92 (2) pp. 95-101. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_BFE2CA09660D]
 
Evaluation of the Rapid Polymyxin NP test and its industrial version for the detection of polymyxin-resistant Enterobacteriaceae.
Jayol A., Kieffer N., Poirel L., Guérin F., Güneser D., Cattoir V., Nordmann P., 2018/10. Diagnostic microbiology and infectious disease, 92 (2) pp. 90-94. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_FC107F826A5D]
 
Let's add invasive aspergillosis to the list of influenza complications.
Lamoth F., Calandra T., 2018/10. The Lancet. Respiratory medicine, 6 (10) pp. 733-735. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6A300B8F74F8]
Metagenomic Analysis of Fish-Associated Ca. Parilichlamydiaceae Reveals Striking Metabolic Similarities to the Terrestrial Chlamydiaceae.
Taylor-Brown A., Pillonel T., Greub G., Vaughan L., Nowak B., Polkinghorne A., 2018/10/01. Genome biology and evolution, 10 (10) pp. 2587-2595. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9BF0FCD108EA]
 
Infections à chlamydias : épidémiologie, pathogenèse, diagnostic et traitements [Chlamydial infections : epidemiology, pathogenesis, diagnosis and treatments]
Tagini F., Greub G., 2018/09/12. Revue medicale suisse, 14 (618) pp. 1620-1625. Peer-reviewed.
[Pmid][serval:BIB_502E47772566]
 
One fungus, several microbes
Imbert C., Hennequin C., Coste A., 2018/09. Journal de Mycologie Médicale, 28 (3) p. 413.
[DOI][WoS][Pmid][serval:BIB_2392778FB3A5]
 
Screening and Characterization of Multidrug-Resistant Gram-Negative Bacteria from a Remote African Area, São Tomé and Príncipe.
Poirel L., Aires-de-Sousa M., Kudyba P., Kieffer N., Nordmann P., 2018/09. Antimicrobial agents and chemotherapy, 62 (9) pp. e01021-1. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_CDF644AF61D8]
A VP1 mutation acquired during an enterovirus 71 disseminated infection confers heparan sulfate binding ability and modulates ex vivo tropism.
Tseligka E.D., Sobo K., Stoppini L., Cagno V., Abdul F., Piuz I., Meylan P., Huang S., Constant S., Tapparel C., 2018/08. PLoS pathogens, 14 (8) pp. e1007190. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AA8B59925F70]
The Antiviral Activity of the Cellular Glycoprotein LGALS3BP/90K Is Species Specific.
Lodermeyer V., Ssebyatika G., Passos V., Ponnurangam A., Malassa A., Ewald E., Stürzel C.M., Kirchhoff F., Rotger M., Falk C.S. et al., 2018/07/15. Journal of virology, 92 (14) p. 1. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_46A7AAA28FE7]
 
Genetic and Functional Characterization of an MCR-3-Like Enzyme-Producing Escherichia coli Isolate Recovered from Swine in Brazil.
Kieffer N., Nordmann P., Moreno A.M., Zanolli Moreno L., Chaby R., Breton A., Tissières P., Poirel L., 2018/07. Antimicrobial agents and chemotherapy, 62 (7) p. 1. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_13B20AACD231]
 
Genomic characterisation of an international Pseudomonas aeruginosa reference panel indicates that the two major groups draw upon distinct mobile gene pools.
Freschi L., Bertelli C., Jeukens J., Moore M.P., Kukavica-Ibrulj I., Emond-Rheault J.G., Hamel J., Fothergill J.L., Tucker N.P., McClean S. et al., 2018/07/01. FEMS microbiology letters, 365 (14) p. 1. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C8AD256CBA60]
 
Novel Insights into Cell Entry of Emerging Human Pathogenic Arenaviruses.
Fedeli C., Moreno H., Kunz S., 2018/06/22. Journal of molecular biology, 430 (13) pp. 1839-1852. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_3FEF5E505811]
Methodologies for <i>in vitro</i> and <i>in vivo</i> evaluation of efficacy of antifungal and antibiofilm agents and surface coatings against fungal biofilms.
Van Dijck P., Sjollema J., Cammue B.P., Lagrou K., Berman J., d'Enfert C., Andes D.R., Arendrup M.C., Brakhage A.A., Calderone R. et al., 2018/06/14. Microbial cell, 5 (7) pp. 300-326. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C3011A74E6CB]
 
A culture medium for screening 16S rRNA methylase-producing pan-aminoglycoside resistant Gram-negative bacteria.
Nordmann P., Mazé A., Culebras E., Dobias J., Jayol A., Poirel L., 2018/06. Diagnostic microbiology and infectious disease, 91 (2) pp. 118-122. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_15FB9C2D5F71]
 
Colistin-resistant carbapenemase-producing isolates among Klebsiella spp. and Acinetobacter baumannii in Tripoli, Libya.
Kieffer N., Ahmed M.O., Elramalli A.K., Daw M.A., Poirel L., Álvarez R., Nordmann P., 2018/06. Journal of global antimicrobial resistance, 13 pp. 37-39. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C1543822371D]
 
Editorial
Coste A., Imbert C., Hennequin C., 2018/06. Journal de Mycologie Médicale, 28 (2) p. 235.
[DOI][WoS][Pmid][serval:BIB_6CF624F92C3F]
How to: identify non-tuberculous Mycobacterium species using MALDI-TOF mass spectrometry.
Alcaide F., Amlerová J., Bou G., Ceyssens P.J., Coll P., Corcoran D., Fangous M.S., González-Álvarez I., Gorton R., Greub G. et al., 2018/06. Clinical microbiology and infection, 24 (6) pp. 599-603. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6D3B229D6392]
 
Role of bi-weekly serum galactomannan screening for the diagnosis of invasive aspergillosis in haematological cancer patients.
Couchepin J., Brunel A.S., Jaton K., Meylan P., Bochud P.Y., Lamoth F., 2018/06. Mycoses, 61 (6) pp. 350-354. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_5633E535BA9A]
 
Worldwide emergence of resistance to antifungal drugs challenges human health and food security.
Fisher M.C., Hawkins N.J., Sanglard D., Gurr S.J., 2018/05/18. Science, 360 (6390) pp. 739-742. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C75D78465327]
Detection of Chlamydiaceae and Chlamydia-like organisms on the ocular surface of children and adults from a trachoma-endemic region.
Ghasemian E., Inic-Kanada A., Collingro A., Tagini F., Stein E., Alchalabi H., Schuerer N., Keše D., Babiker B.E., Borel N. et al., 2018/05/09. Scientific reports, 8 (1) p. 7432. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E6405A1C1146]
 
Comparative Population Genomics Analysis of the Mammalian Fungal Pathogen Pneumocystis.
Cissé O.H., Ma L., Wei Huang D., Khil P.P., Dekker J.P., Kutty G., Bishop L., Liu Y., Deng X., Hauser P.M. et al., 2018/05/08. mBio, 9 (3) pp. NA. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C56A19AF22D0]
 
Evaluation of three broth microdilution systems to determine colistin susceptibility of Gram-negative bacilli.
Jayol A., Nordmann P., André C., Poirel L., Dubois V., 2018/05/01. The Journal of antimicrobial chemotherapy, 73 (5) pp. 1272-1278. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_3E645E66D324]
 
Fluconazole non-susceptible breakthrough candidemia after prolonged low-dose prophylaxis: a prospective FUNGINOS study.
Orasch C., Mertz D., Garbino J., van Delden C., Emonet S., Schrenzel J., Zimmerli S., Damonti L., Mühlethaler K., Imhof A. et al., 2018/05. The Journal of infection, 76 (5) pp. 489-495. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AB78279BDFD7]
 
Genome sequencing and functional characterization of the non-pathogenic Klebsiella pneumoniae KpGe bacteria.
Lima W.C., Pillonel T., Bertelli C., Ifrid E., Greub G., Cosson P., 2018/05. Microbes and infection, 20 (5) pp. 293-301. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E3A61F3A6E26]
 
Integrase-Mediated Recombination of the bel-1 Gene Cassette Encoding the Extended-Spectrum β-Lactamase BEL-1.
Bouheraoua N., Poirel L., Bourreau B., Bonnin R., Laroche L., Naas T., Nordmann P., 2018/05. Antimicrobial agents and chemotherapy, 62 (5) pp. e00030-18 . Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9B5853587B79]
Resistome Analysis of a Carbapenemase (OXA-48)-Producing and Colistin-Resistant Klebsiella pneumoniae Strain.
Pillonel T., Nordmann P., Bertelli C., Prod' Hom G., Poirel L., Greub G., 2018/05. Antimicrobial agents and chemotherapy, 62 (5) pp. e00076-18 . Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5F1E5B63B916]
What is the true clinical relevance of Simkania negevensis and other emerging Chlamydiales members?
Vouga M., Kebbi-Beghdadi C., Liénard J., Baskin L., Baud D., Greub G., 2018/05. New microbes and new infections, 23 pp. 1-5. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_92241296F0A3]
Single-Cell RNA-Seq Reveals Transcriptional Heterogeneity in Latent and Reactivated HIV-Infected Cells.
Golumbeanu M., Cristinelli S., Rato S., Munoz M., Cavassini M., Beerenwinkel N., Ciuffi A., 2018/04/24. Cell reports, 23 (4) pp. 942-950. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E140228EED10]
Novel Chlamydia species isolated from snakes are temperature-sensitive and exhibit decreased susceptibility to azithromycin.
Staub E., Marti H., Biondi R., Levi A., Donati M., Leonard C.A., Ley S.D., Pillonel T., Greub G., Seth-Smith HMB et al., 2018/04/04. Scientific reports, 8 (1) p. 5660. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_33295F4DC436]
A cluster of multidrug-resistant Mycobacterium tuberculosis among patients arriving in Europe from the Horn of Africa: a molecular epidemiological study
Walker Timothy M, Merker Matthias, Knoblauch Astrid M, Helbling Peter, Schoch Otto D, van der Werf Marieke J, Kranzer Katharina, Fiebig Lena, Kröger Stefan, Haas Walter et al., 2018/04. The Lancet Infectious Diseases, 18 (4) pp. 431-440.
[URN][DOI][Pmid][serval:BIB_4A2575D740A5]
Azole Resistance of Environmental and Clinical Aspergillus fumigatus Isolates from Switzerland.
Riat A., Plojoux J., Gindro K., Schrenzel J., Sanglard D., 2018/04. Antimicrobial agents and chemotherapy, 62 (4) pp. e02088-17 . Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_702EAF31F853]
Detection of respiratory bacterial pathogens causing atypical pneumonia by multiplex Lightmix<sup>®</sup> RT-PCR.
Wagner K., Springer B., Imkamp F., Opota O., Greub G., Keller P.M., 2018/04. International journal of medical microbiology, 308 (3) pp. 317-323. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_D7A3ACFF6749]
 
Evaluating the use of whole-genome sequencing for outbreak investigations in the lack of closely related reference genome.
Abdelbary MMH, Senn L., Moulin E., Prod'hom G., Croxatto A., Greub G., Blanc D.S., 2018/04. Infection, genetics and evolution, 59 pp. 1-6. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_871E9A950339]
 
Hepatitis E virus as a cause of acute hepatitis acquired in Switzerland.
Fraga M., Doerig C., Moulin H., Bihl F., Brunner F., Müllhaupt B., Ripellino P., Semela D., Stickel F., Terziroli Beretta-Piccoli B. et al., 2018/04. Liver international, 38 (4) pp. 619-626. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_989825B85C8C]
 
High Rate of Association of 16S rRNA Methylases and Carbapenemases in Enterobacteriaceae Recovered from Hospitalized Children in Angola.
Poirel L., Goutines J., Aires-de-Sousa M., Nordmann P., 2018/04. Antimicrobial agents and chemotherapy, 62 (4) pp. e00021-18 . Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_11DF78F8376A]
The use of single-cell RNA-Seq to understand virus-host interactions.
Cristinelli S., Ciuffi A., 2018/04. Current opinion in virology, 29 pp. 39-50. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_CD039323A8CC]
Detection of novel astroviruses MLB1 and MLB2 in the sera of febrile Tanzanian children.
Cordey S., Hartley M.A., Keitel K., Laubscher F., Brito F., Junier T., Kagoro F., Samaka J., Masimba J., Said Z. et al., 2018/03/14. Emerging microbes & infections, 7 (1) p. 27. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C49470704598]
Burden of severe RSV disease among immunocompromised children and adults: a 10 year retrospective study.
Chatzis O., Darbre S., Pasquier J., Meylan P., Manuel O., Aubert J.D., Beck-Popovic M., Masouridi-Levrat S., Ansari M., Kaiser L. et al., 2018/03/06. BMC infectious diseases, 18 (1) p. 111. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_8C5CB4E6E122]
 
Are privacy-enhancing technologies for genomic data ready for the clinic? A survey of medical experts of the Swiss HIV Cohort Study.
Raisaro J.L., McLaren P.J., Fellay J., Cavassini M., Klersy C., Hubaux J.P., Swiss HIV Cohort Study, 2018/03. Journal of biomedical informatics, 79 pp. 1-6. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AA11676A72A9]
 
Axl Can Serve as Entry Factor for Lassa Virus Depending on the Functional Glycosylation of Dystroglycan.
Fedeli C., Torriani G., Galan-Navarro C., Moraz M.L., Moreno H., Gerold G., Kunz S., 2018/03/01. Journal of virology, 92 (5) pp. e01613-17. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_DEBA0C997D59]
Chlamydiae in febrile children with respiratory tract symptoms and age-matched controls, Ghana.
Bühl H., Eibach D., Nagel M., Greub G., Borel N., Sarpong N., Rettig T., Pesch T., Aeby S., Klöckner A. et al., 2018/03. New microbes and new infections, 22 pp. 44-48. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_28BBF4635E85]
 
Correction to: Catheter retention as a consequence rather than a cause of unfavorable outcome in candidemia.
Damonti L., Erard V., Garbino J., Schrenzel J., Zimmerli S., Mühlethaler K., Imhof A., Zbinden R., Fehr J., Boggian K. et al., 2018/03..
[DOI][WoS][Pmid][serval:BIB_57775AC05AC1]
 
Emergence of an MDR Klebsiella pneumoniae ST231 producing OXA-232 and RmtF in Switzerland.
Mancini S., Poirel L., Tritten M.L., Lienhard R., Bassi C., Nordmann P., 2018/03/01. The Journal of antimicrobial chemotherapy, 73 (3) pp. 821-823. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_889D2006892A]
 
Extracellular enzymes and adhesive properties of medically important Candida spp. strains from landfill leachate.
Amani D., Emira N., Ismail T., Jamel E., Dominique S., Rosa D.C., Mejdi S., 2018/03. Microbial pathogenesis, 116 pp. 328-334. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1BB0A4D1FE15]
 
Global emergence of the widespread Pseudomonas aeruginosa ST235 clone.
Treepong P., Kos V.N., Guyeux C., Blanc D.S., Bertrand X., Valot B., Hocquet D., 2018/03. Clinical microbiology and infection, 24 (3) pp. 258-266. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F6E02E74ED6B]
 
Impact of the 2014-2015 influenza season on the activity of an academic emergency department.
Beysard N., Yersin B., Meylan P., Hugli O., Carron P.N., 2018/03. Internal and emergency medicine, 13 (2) pp. 251-256. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_63B7FF1CEAF5]
 
Transposition of Tn1213 Encoding the PER-1 Extended-Spectrum β-Lactamase.
Mancini S., Poirel L., Kieffer N., Nordmann P., 2018/03. Antimicrobial agents and chemotherapy, 62 (3) pp. e02453-17 . Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_3F90F8AA669F]
 
Trends in HCV treatment uptake, efficacy and impact on liver fibrosis in the Swiss HIV Cohort Study.
Béguelin C., Suter A., Bernasconi E., Fehr J., Kovari H., Bucher H.C., Stoeckle M., Cavassini M., Rougemont M., Schmid P. et al., 2018/03. Liver international, 38 (3) pp. 424-431. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_62355A30C0EF]
Functional and Expression Analyses of the <i>Pneumocystis MAT</i> Genes Suggest Obligate Sexuality through Primary Homothallism within Host Lungs.
Richard S., Almeida JMGCF, Cissé O.H., Luraschi A., Nielsen O., Pagni M., Hauser P.M., 2018/02/20. mBio, 9 (1) pp. NA. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F34716C3472E]
 
Co-production of MCR-1 and extended-spectrum β-lactamase in Escherichia coli recovered from urinary tract infections in Switzerland.
Kieffer N., Poirel L., Clerc O., Lienhard R., Nordmann P., 2018/02. Infection, 46 (1) pp. 143-144. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_690C7E904916]
Comparison of methods for detection of plasmid-mediated and chromosomally encoded colistin resistance in Enterobacteriaceae.
Jayol A., Nordmann P., Lehours P., Poirel L., Dubois V., 2018/02. Clinical microbiology and infection, 24 (2) pp. 175-179. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_F44C247A767D]
 
Klebsiella pneumoniae co-producing KPC and RmtG, finally targeting Switzerland.
Mancini S., Poirel L., Corthesy M., Greub G., Nordmann P., 2018/02. Diagnostic microbiology and infectious disease, 90 (2) pp. 151-152. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_52F78DD0D6F2]
 
Time to Switch to Second-line Antiretroviral Therapy in Children With Human Immunodeficiency Virus in Europe and Thailand.
European Pregnancy and Paediatric HIV Cohort Collaboration (EPPICC) Study Group in EuroCoord, Goetghebuer T., 2018/02/01. Clinical infectious diseases, 66 (4) pp. 594-603. Peer-reviewed.
[DOI][Pmid][serval:BIB_498102734DE0]
 
The Candida auris Alert: Facts and Perspectives.
Lamoth F., Kontoyiannis D.P., 2018/01/30. The Journal of infectious diseases, 217 (4) pp. 516-520. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7F8BCC891BE3]
 
Azole resistance in a <i>Candida albicans</i> mutant lacking the ABC transporter <i>CDR6/ROA1</i> depends on TOR signaling.
Khandelwal N.K., Chauhan N., Sarkar P., Esquivel B.D., Coccetti P., Singh A., Coste A.T., Gupta M., Sanglard D., White T.C. et al., 2018/01/12. The Journal of biological chemistry, 293 (2) pp. 412-432. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_383820A83AF7]
A historical legacy of antibiotic utilization on bacterial seed banks in sediments.
Madueño L., Paul C., Junier T., Bayrychenko Z., Filippidou S., Beck K., Greub G., Bürgmann H., Junier P., 2018. PeerJ, 6 pp. e4197. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_ABD7157C5495]
 
A standardized toolkit for genetic engineering of CTG clade yeasts.
Defosse T.A., Courdavault V., Coste A.T., Clastre M., de Bernonville T.D., Godon C., Vandeputte P., Lanoue A., Touzé A., Linder T. et al., 2018/01. Journal of microbiological methods, 144 pp. 152-156. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_86F8089ABB9C]
Antibodies to <i>Chlamydia trachomatis</i> and reproductive health issues in women with SLE: a case-control study.
Santos A., Greub G., Aeby S., Wunder D., Pantaleo G., Ribi C., 2018. Lupus science & medicine, 5 (1) pp. e000293. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_B997988DA92E]
 
Changes in the epidemiological landscape of invasive candidiasis.
Lamoth F., Lockhart S.R., Berkow E.L., Calandra T., 2018/01/01. The Journal of antimicrobial chemotherapy, 73 (suppl_1) pp. i4-i13. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_32A16E1338F4]
 
Chlamydia, rickettsia and other intracellular bacteria.
Greub G., 2018. Microbes and infection, 20 (7-8) p. 391. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A0FE69553032]
Chlamydiales, Anaplasma and Bartonella: persistence and immune escape of intracellular bacteria.
Scherler A., Jacquier N., Greub G., 2018. Microbes and infection, 20 (7-8) pp. 416-423. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A1F6F78D5BB4]
 
Clinical characteristics, audiological and neurodevelopmental outcomes of newborns with congenital cytomegalovirus infection.
Kobas M., Bickle Graz M., Truttmann A.C., Giannoni E., Meylan P., Asner S.A., 2018. Swiss medical weekly, 148 pp. w14627. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_79D939CFAC13]
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