Department of Fundamental Microbiology

Publications | Phd and Masters theses

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1114 publications

... | 2014 | 2013 | 2012 | 2011 | 2010 | 2009 | ...
2014
 
Insecticidal activity of plant root-associated bacteria
Kupferschmied P., Keel C., 2014. pp. 52-58 dans Bertrand C. (eds.) Natural products and biocontrol : les médiateurs chimiques naturels impliqués dans les mécanismes de protection des cultures, Presses Universitaires de Perpignan.
[serval:BIB_EDA27386AC54]
Is trauma in Switzerland any different? epidemiology and patterns of injury in major trauma - a 5-year review from a Swiss trauma centre.
Heim C., Bosisio F., Roth A., Bloch J., Borens O., Daniel R.T., Denys A., Oddo M., Pasquier M., Schmidt S. et al., 2014. Swiss medical weekly, 144 pp. w13958. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A89E87E6A278]
 
Life history analysis of integrative and conjugative element activation in growing microcolonies of Pseudomonas.
Reinhard F., van der Meer J.R., 2014. Journal of Bacteriology, 196 (7) pp. 1425-1434. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_31B26B4E0819]
 
Lon protease negatively affects GacA protein stability and expression of the Gac/Rsm signal transduction pathway in Pseudomonas protegens.
Takeuchi K., Tsuchiya W., Noda N., Suzuki R., Yamazaki T., Haas D., 2014. Environmental Microbiology, 16 (8) pp. 2538-2549.
[DOI][WoS][Pmid][serval:BIB_F76F69725FC3]
NrsZ: a novel, processed, nitrogen-dependent, small non-coding RNA that regulates Pseudomonas aeruginosa PAO1 virulence.
Wenner N., Maes A., Cotado-Sampayo M., Lapouge K., 2014. Environmental Microbiology, 16 (4) pp. 1053-1068.
[URN][DOI][WoS][Pmid][serval:BIB_53BD1DDECAE6]
Pom1 regulates the assembly of Cdr2-Mid1 cortical nodes for robust spatial control of cytokinesis.
Rincon S.A., Bhatia P., Bicho C., Guzman-Vendrell M., Fraisier V., Borek W.E., Alves Fde L, Dingli F., Loew D., Rappsilber J. et al., 2014. Journal of Cell Biology, 206 (1) pp. 61-77.
[URN][DOI][WoS][Pmid][serval:BIB_BE73EE8BE19D]
 
Pore-forming pyocin S5 utilizes the FptA ferripyochelin receptor to kill Pseudomonas aeruginosa.
Elfarash A., Dingemans J., Ye L., Hassan A.A., Craggs M., Reimmann C., Thomas M.S., Cornelis P., 2014. Microbiology, 160 (Pt 2) pp. 261-269.
[DOI][WoS][Pmid][serval:BIB_47222CF9F9F7]
Quantifying intracellular protein binding thermodynamics during mechanotransduction based on FRET spectroscopy.
Abdul Rahim N.A., Pelet S., Mofrad M.R., So P.T., Kamm R.D., 2014. Methods, 66 (2) pp. 208-221. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9FFA0A07FCDE]
 
Rapid detection of Staphylococcus aureus strains with reduced susceptibility to vancomycin by isothermal microcalorimetry.
Entenza J.M., Bétrisey B., Manuel O., Giddey M., Sakwinska O., Laurent F., Bizzini A., 2014. Journal of Clinical Microbiology, 52 (1) pp. 180-186.
[DOI][WoS][Pmid][serval:BIB_BDAE7703AF53]
 
Repression of flagellar genes in exponential phase by CsgD and CpxR, two crucial modulators of Escherichia coli biofilm formation.
Dudin O., Geiselmann J., Ogasawara H., Ishihama A., Lacour S., 2014. Journal of Bacteriology, 196 (3) pp. 707-715.
[DOI][WoS][Pmid][serval:BIB_5C0EBC04840B]
 
Scalable inference of heterogeneous reaction kinetics from pooled single-cell recordings.
Zechner C., Unger M., Pelet S., Peter M., Koeppl H., 2014. Nature Methods, 11 (2) pp. 197-202. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_68F8FB0396B8]
 
The Effect of Inoculum Size on Selection of In Vitro Resistance to Vancomycin, Daptomycin, and Linezolid in Methicillin-Resistant Staphylococcus aureus.
Rio-Marques L., Hartke A., Bizzini A., 2014. Microbial Drug Resistance, 20 (6) pp. 539-543. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AD723798F556]
The functions of DNA methylation by CcrM in Caulobacter crescentus: a global approach.
Gonzalez D., Kozdon J.B., McAdams H.H., Shapiro L., Collier J., 2014. Nucleic Acids Research, 42 (6) pp. 3720-3735. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9C1AC2294C78]
The novel proteins Rng8 and Rng9 regulate the myosin-V Myo51 during fission yeast cytokinesis.
Wang N., Lo Presti L., Zhu Y.H., Kang M., Wu Z., Martin S.G., Wu J.Q., 2014. Journal of Cell Biology, 205 (3) pp. 357-375.
[URN][DOI][WoS][Pmid][serval:BIB_E0A037A59346]
The Tea4-PP1 landmark promotes local growth by dual Cdc42 GEF recruitment and GAP exclusion.
Kokkoris K., Gallo Castro D., Martin S.G., 2014. Journal of Cell Science, 127 (Pt 9) pp. 2005-2016.
[URN][DOI][WoS][Pmid][serval:BIB_74CC809F3679]
 
The TetR-type MfsR protein of the integrative and conjugative element (ICE) ICEclc controls both a putative efflux system and initiation of ICE transfer.
Pradervand N., Delavat F., Sulser S., Miyazaki R., van der Meer J.R., 2014. Journal of Bacteriology, 196 (22) pp. 3971-3979.
[DOI][WoS][Pmid][serval:BIB_73DABBD0EAB1]
 
Transcriptional profiling of Gram-positive Arthrobacter in the phyllosphere: induction of pollutant degradation genes by natural plant phenolic compounds.
Scheublin T.R., Deusch S., Moreno-Forero S.K., Müller J.A., van der Meer J.R., Leveau J.H., 2014. Environmental Microbiology, 16 (7) pp. 2212-2225.
[DOI][WoS][Pmid][serval:BIB_72524887A306]
Visualising microorganisms from molecules to cells.
Goodsell D.S., Haas D., 2014. FEMS Microbiology Letters, 356 (1) pp. 1-7.
[URN][DOI][WoS][Pmid][serval:BIB_DFEBE6E74379]
Yeasts as models in cell biology.
Martin S.G., 2014. FEMS Microbiology Reviews, 38 (2) p. 143.
[URN][DOI][WoS][Pmid][serval:BIB_68DFC4E7744A]
2013
Intravenous streptomycin dosing regimen in a patient undergoing hemodialysis: Plasma level monitoring and pharmacokinetic simulation
Chtioui H., Zbinden D., Manuel O., Entenza J., Decosterd L.A., Buclin T., 2013/08. pp. e106 dans 11th Conference of the European Association for Clinical Pharmacology and Therapeutics, Clinical Therapeutics.
[URN][DOI][serval:BIB_7147B1F82056]
 
A New Large-DNA-Fragment Delivery System Based on Integrase Activity from an Integrative and Conjugative Element.
Miyazaki R., van der Meer J.R., 2013. Applied and Environmental Microbiology, 79 (14) pp. 4440-4447. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_064586E230F3]
A positive interaction between inhibitors of protein synthesis and cefepime in the fight against methicillin-resistant Staphylococcus aureus.
Guignard B., Vouillamoz J., Giddey M., Moreillon P., 2013. European Journal of Clinical Microbiology and Infectious Diseases, 32 (7) pp. 899-907.
[URN][DOI][WoS][Pmid][serval:BIB_5CF3C43CEA82]
A quorum sensing small volatile molecule promotes antibiotic tolerance in bacteria.
Que Y.A., Hazan R., Strobel B., Maura D., He J., Kesarwani M., Panopoulos P., Tsurumi A., Giddey M., Wilhelmy J. et al., 2013. PLoS One, 8 (12) pp. e80140. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_223B7CEDC463]
 
Bactericidal synergism between daptomycin and the phage lysin Cpl-1 in a mouse model of pneumococcal bacteraemia.
Vouillamoz J., Entenza J.M., Giddey M., Fischetti V.A., Moreillon P., Resch G., 2013. International Journal of Antimicrobial Agents, 42 (5) pp. 416-421.
[DOI][WoS][Pmid][serval:BIB_F47E9D5C75C0]
 
Bioreporters and biosensors for arsenic detection. Biotechnological solutions for a world-wide pollution problem.
Merulla D., Buffi N., Beggah S., Truffer F., Geiser M., Renaud P., van der Meer J.R., 2013. Current Opinion in Biotechnology, 24 (3) pp. 534-541.
[DOI][WoS][Pmid][serval:BIB_FAF803CA1333]
 
Catabolite repression in Pseudomonas aeruginosa PAO1 regulates the uptake of C4 -dicarboxylates depending on succinate concentration.
Valentini M., Lapouge K., 2013. Environmental Microbiology, 15 (6) pp. 1707-1716.
[DOI][WoS][Pmid][serval:BIB_0D718E830B30]
Cdc42 explores the cell periphery for mate selection in fission yeast.
Bendezú F.O., Martin S.G., 2013. Current Biology, 23 (1) pp. 42-47.
[URN][DOI][WoS][Pmid][serval:BIB_19B67C8802D5]
 
Cell differentiation to "mating bodies" induced by an integrating and conjugative element in free-living bacteria.
Reinhard F., Miyazaki R., Pradervand N., van der Meer J.R., 2013. Current Biology, 23 (3) pp. 255-259.
[DOI][WoS][Pmid][serval:BIB_9AC49313302F]
Characterization of a MexAB-OprM efflux system necessary for productive metabolism of Pseudomonas azelaica HBP1 on 2-hydroxybiphenyl.
Czechowska K., Reimmann C., van der Meer J.R., 2013. Frontiers in Microbiology, 4 p. 203.
[URN][DOI][WoS][Pmid][serval:BIB_C10F602C3AD8]
Community-wide plasmid gene mobilization and selection.
Sentchilo V., Mayer A.P., Guy L., Miyazaki R., Green Tringe S., Barry K., Malfatti S., Goessmann A., Robinson-Rechavi M., van der Meer J.R., 2013. ISME Journal, 7 (6) pp. 1173-1186.
[URN][DOI][WoS][Pmid][serval:BIB_B5128FCC3FB5]
 
Control and host-dependent activation of insect toxin expression in a root-associated biocontrol pseudomonad.
Péchy-Tarr M., Borel N., Kupferschmied P., Turner V., Binggeli O., Radovanovic D., Maurhofer M., Keel C., 2013. Environmental Microbiology, 15 (3) pp. 736-750.
[DOI][WoS][Pmid][serval:BIB_3B8F92118AE5]
DNA Fingerprinting of Pearls to Determine Their Origins
Meyer J.B., Cartier L.E., Pinto-Figueroa E.A., Krzemnicki M.S., Hänni H.A., McDonald B.A., 2013. Plos One, 8 (10) pp. e75606. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3A1578ED3612]
DNA methylation by CcrM activates the transcription of two genes required for the division of Caulobacter crescentus.
Gonzalez D., Collier J., 2013. Molecular Microbiology, 88 (1) pp. 203-218.
[URN][DOI][WoS][Pmid][serval:BIB_C28ECAE2773B]
Does wheat genetically modified for disease resistance affect root-colonizing pseudomonads and arbuscular mycorrhizal fungi?
Meyer J.B., Song-Wilson Y., Foetzki A., Luginbühl C., Winzeler M., Kneubühler Y., Matasci C., Mascher-Frutschi F., Kalinina O., Boller T. et al., 2013. PLoS One, 8 (1) pp. e53825.
[URN][DOI][WoS][Pmid][serval:BIB_8CA2F788D83B]
 
Electrochemical As(III) whole-cell based biochip sensor.
Cortés-Salazar F., Beggah S., van der Meer J.R., Girault H.H., 2013. Biosensors and Bioelectronics, 47 pp. 237-242.
[DOI][WoS][Pmid][serval:BIB_A2F5B964F7BC]
 
Enterococcal endocarditis in the beginning of the 21st century: analysis from the International Collaboration on Endocarditis-Prospective Cohort Study.
Chirouze C., Athan E., Alla F., Chu V.H., Ralph Corey G., Selton-Suty C., Erpelding M.L., Miro J.M., Olaison L., Hoen B. et al., 2013. Clinical Microbiology and Infection, 19 (12) pp. 1140-1147.
[DOI][WoS][Pmid][serval:BIB_7E8FACC8D695]
 
Examining chemical compound biodegradation at low concentrations through bacterial cell proliferation.
Czechowska K., Sentchilo V., Beggah S., Rey S., Seyfried M., van der Meer J.R., 2013. Environmental Science and Technology, 47 (4) pp. 1913-1921.
[DOI][WoS][Pmid][serval:BIB_904323C94D10]
Expression of SCCmec cassette chromosome recombinases in methicillin-resistant Staphylococcus aureus and Staphylococcus epidermidis.
Stojanov M., Sakwinska O., Moreillon P., 2013. Journal of Antimicrobial Chemotherapy, 68 (4) pp. 749-757.
[URN][DOI][WoS][Pmid][serval:BIB_3C26D68A41FB]
 
Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacterium Sphingomonas wittichii RW1.
Roggo C., Coronado E., Moreno-Forero S.K., Harshman K., Weber J., van der Meer J.R., 2013. Environmental Microbiology, 15 (10) pp. 2681-2695.
[DOI][WoS][Pmid][serval:BIB_98FA785B3C61]
Global methylation state at base-pair resolution of the Caulobacter genome throughout the cell cycle.
Kozdon J.B., Melfi M.D., Luong K., Clark T.A., Boitano M., Wang S., Zhou B., Gonzalez D., Collier J., Turner S.W. et al., 2013. Proceedings of the National Academy of Sciences of the United States of America, 110 (48) pp. E4658-E4667. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_DD7C06ECD51A]
 
HACEK infective endocarditis: characteristics and outcomes from a large, multi-national cohort.
Chambers S.T., Murdoch D., Morris A., Holland D., Pappas P., Almela M., Fernández-Hidalgo N., Almirante B., Bouza E., Forno D. et al., 2013. PLoS One, 8 (5) pp. e63181.
[DOI][WoS][Pmid][serval:BIB_75FCAC2A1C92]
Human-to-bovine jump of Staphylococcus aureus CC8 is associated with the loss of a β-hemolysin converting prophage and the acquisition of a new staphylococcal cassette chromosome.
Resch G., François P., Morisset D., Stojanov M., Bonetti E.J., Schrenzel J., Sakwinska O., Moreillon P., 2013. PLoS One, 8 (3) pp. e58187.
[URN][DOI][WoS][Pmid][serval:BIB_D2A0A1059238]
 
Impact of mycelia on the accessibility of fluorene to PAH-degrading bacteria.
Schamfuß S., Neu T.R., van der Meer J.R., Tecon R., Harms H., Wick L.Y., 2013. Environmental Science and Technology, 47 (13) pp. 6908-6915.
[DOI][WoS][Pmid][serval:BIB_DE4D9C95B242]
Improved statistical analysis of low abundance phenomena in bimodal bacterial populations.
Reinhard F., van der Meer J.R., 2013. PLoS One, 8 (10) pp. e78288.
[URN][DOI][WoS][Pmid][serval:BIB_816AAE447B04]
 
In vitro characterization of PlySK1249, a novel phage lysin, and assessment of its antibacterial activity in a mouse model of Streptococcus agalactiae bacteremia.
Oechslin F., Daraspe J., Giddey M., Moreillon P., Resch G., 2013. Antimicrobial Agents and Chemotherapy, 57 (12) pp. 6276-6283.
[DOI][WoS][Pmid][serval:BIB_F9AED7358FB3]
In vitro-binding of the natural siderophore enantiomers pyochelin and enantiopyochelin to their AraC-type regulators PchR in Pseudomonas.
Lin P.C., Youard Z.A., Reimmann C., 2013. Biometals, 26 (6) pp. 1067-1073.
[URN][DOI][WoS][Pmid][serval:BIB_96BF5150B68E]
 
In-hospital and 1-year mortality in patients undergoing early surgery for prosthetic valve endocarditis.
Lalani T., Chu V.H., Park L.P., Cecchi E., Corey G.R., Durante-Mangoni E., Fowler V.G., Gordon D., Grossi P., Hannan M. et al., 2013. JAMA Internal Medicine, 173 (16) pp. 1495-1504.
[DOI][WoS][Pmid][serval:BIB_FC667FBDEF40]
 
Influence of the timing of cardiac surgery on the outcome of patients with infective endocarditis and stroke.
Barsic B., Dickerman S., Krajinovic V., Pappas P., Altclas J., Carosi G., Casabé J.H., Chu V.H., Delahaye F., Edathodu J. et al., 2013. Clinical Infectious Diseases, 56 (2) pp. 209-217.
[DOI][WoS][Pmid][serval:BIB_74EF3F5152EF]
Macrophage Migration Inhibitory Factor Deficiency Is Associated With Impaired Killing of Gram-Negative Bacteria by Macrophages and Increased Susceptibility to Klebsiella pneumoniae Sepsis.
Roger T., Delaloye J., Chanson A.L., Giddey M., Le Roy D., Calandra T., 2013. Journal of Infectious Diseases, 207 (2) pp. 331-339.
[URN][DOI][WoS][Pmid][serval:BIB_128D1C9ED56C]
Mate and fuse: how yeast cells do it.
Merlini L., Dudin O., Martin S.G., 2013. Open Biology, 3 (3) p. 130008. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_40238B00BF6D]
 
Noise and Stochasticity in Gene Expression
Mikkel Girke Jørgensen, Renske van Raaphorst, Jan-Willem Veening, 2013..
[DOI][serval:BIB_92C03728CF14]
 
Oral insecticidal activity of plant-associated pseudomonads.
Ruffner B., Péchy-Tarr M., Ryffel F., Hoegger P., Obrist C., Rindlisbacher A., Keel C., Maurhofer M., 2013. Environmental Microbiology, 15 (3) pp. 751-763.
[DOI][WoS][Pmid][serval:BIB_E7BEAC2C062B]
 
Physiology and transcriptome of the polycyclic aromatic hydrocarbon-degrading Sphingomonas sp. LH128 after long-term starvation.
Fida T.T., Moreno-Forero S.K., Heipieper H.J., Springael D., 2013. Microbiology, 159 (Pt 9) pp. 1807-1817.
[DOI][WoS][Pmid][serval:BIB_1BF0597FCE30]
Promise for plant pest control: root-associated pseudomonads with insecticidal activities.
Kupferschmied P., Maurhofer M., Keel C., 2013. Frontiers in Plant Science, 4 p. 287.
[URN][DOI][WoS][Pmid][serval:BIB_0251BBD7E06A]
 
Protein engineering in microdroplets
Schaerli Y., Kintses B., Hollfelder F., 2013. pp. 73-84 dans Lutz S., Bornscheuer U.T. (eds.) Protein Engineering Handbook chap. 4, Wiley-VCH.
[serval:BIB_9BCF6C046B7E]
 
RNA pentaloop structures as effective targets of regulators belonging to the RsmA/CsrA protein family.
Lapouge K., Perozzo R., Iwaszkiewicz J., Bertelli C., Zoete V., Michielin O., Scapozza L., Haas D., 2013. RNA Biology, 10 (6) pp. 1031-1041. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7F969FD46661]
 
Streptococcus tigurinus is highly virulent in a rat model of experimental endocarditis.
Veloso T.R., Zbinden A., Andreoni F., Giddey M., Vouillamoz J., Moreillon P., Zinkernagel A.S., Entenza J.M., 2013. International Journal of Medical Microbiology, 303 (8) pp. 498-504. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D0834021ED45]
 
Temporal quantification of MAPK induced expression in single yeast cells.
Pelet S., Aymoz D., Durandau E., 2013. Journal of Visualized Experiments 80 pp. 1-8. Peer-reviewed.
[DOI][Pmid][serval:BIB_C5D261D6B9AB]
 
The clc element and related genomic islands in Proteobacteria
Miyazaki R., Minoia M., Pradervand N., Sentchilo V., Sulser S., Reinhard F., van der Meer J. R., 2013/01. p. 336 dans Roberts A.P., Mullany P. (eds.) Bacterial integrative mobile genetic elements, Landes Bioscience.
[serval:BIB_E4924A2BDD7E]
 
The Pseudomonas aeruginosa antimetabolite L-2-amino-4-methoxy-trans-3-butenoic acid inhibits growth of Erwinia amylovora and acts as a seed germination-arrest factor
Lee Y., Azevedo M.D., Armstrong D.J., Banowetz G.M., Reimmann C., 2013. Environmental Microbiology Reports, 5 (1) pp. 83-89.
[DOI][WoS][serval:BIB_E4DD4A061828]
The β-sliding clamp directs the localization of HdaA to the replisome in Caulobacter crescentus.
Fernandez-Fernandez C., Grosse K., Sourjik V., Collier J., 2013. Microbiology, 159 (Pt 11) pp. 2237-2248. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_3FDD7A393EDE]
Tunable reporter signal production in feedback-uncoupled arsenic bioreporters.
Merulla D., Hatzimanikatis V., van der Meer J.R., 2013. Microbial Biotechnology, 6 (5) pp. 503-514. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_5B9F1130187F]
 
Use of a human-like low-grade bacteremia model of experimental endocarditis to study the role of Staphylococcus aureus adhesins and platelet aggregation in early endocarditis.
Veloso T.R., Chaouch A., Roger T., Giddey M., Vouillamoz J., Majcherczyk P., Que Y.A., Rousson V., Moreillon P., Entenza J.M., 2013. Infection and Immunity, 81 (3) pp. 697-703. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_055F07556E9F]
2012
Daptomycin for highly resistant Enterococcus faecium infection.
Rosin C., Bernsmeier C., Entenza J.M., Moreillon P., Frei R., Weisser M., Flückiger U., 2012/06/26. Swiss medical weekly, 142 pp. w13603. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_6C0D260F056D]
Statistical discrimination of black gel pen inks analysed by laser desorption/ionization mass spectrometry
Weyermann C., Bucher L., Majcherczyk P., Mazzella W., Roux C., Esseiva P., 2012/04. Forensic Science International, 217 (1-3) pp. 127-133.
[URN][DOI][WoS][Pmid][serval:BIB_7E7A606A2ECD]
Antimicrobial resistance of Staphylococcus aureus strains acquired by pig farmers from pigs
Oppliger Anne, Moreillon Philippe, Charrière Nicole, Giddey Marlyse, Morisset Delphine, Sakwinska Olga, 2012. Applied and Environmental Microbiology, 78 (22) pp. 8010-8014. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_9DE189BA370D]
Being at the right place at the right time.
Martin S.G., 2012. Molecular Biology of the Cell, 23 (21) pp. 4148-4150.
[URN][DOI][WoS][Pmid][serval:BIB_EA50A16EBB57]
Captivating titles and award-winning labels to promote premium products of microbiology.
Haas D., 2012. FEMS Microbiology Reviews, 36 (2) pp. 267-268.
[URN][DOI][WoS][Pmid][serval:BIB_9B083ABA5B4B]
 
Catabolite repression control of pyocyanin biosynthesis at an intersection of primary and secondary metabolism in Pseudomonas aeruginosa.
Huang J., Sonnleitner E., Ren B., Xu Y., Haas D., 2012. Applied and Environmental Microbiology, 78 (14) pp. 5016-5020.
[DOI][WoS][Pmid][serval:BIB_4B52572A08E0]
 
Cdc42 oscillations in yeasts.
Bendezú F.O., Martin S.G., 2012. Science Signaling, 5 (253) pp. pe53.
[DOI][WoS][Pmid][serval:BIB_D6CC9F399B4A]
Cellular variability of RpoS expression underlies subpopulation activation of an integrative and conjugative element.
Miyazaki R., Minoia M., Pradervand N., Sulser S., Reinhard F., van der Meer J.R., 2012. PLoS Genetics, 8 (7) pp. e1002818. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_24349ACB7339]
 
Clinical characteristics and outcome of infective endocarditis involving implantable cardiac devices.
Athan E., Chu V.H., Tattevin P., Selton-Suty C., Jones P., Naber C., Miró J.M., Ninot S., Fernández-Hidalgo N., Durante-Mangoni E. et al., 2012. Journal of the American Medical Association, 307 (16) pp. 1727-1735.
[DOI][WoS][Pmid][serval:BIB_3356FE02B52D]
Deletion of hypothetical wall teichoic acid ligases in Staphylococcus aureus activates the cell wall stress response.
Dengler V., Meier P.S., Heusser R., Kupferschmied P., Fazekas J., Friebe S., Staufer S.B., Majcherczyk P.A., Moreillon P., Berger-Bächi B. et al., 2012. FEMS Microbiology Letters, 333 (2) pp. 109-120.
[URN][DOI][WoS][Pmid][serval:BIB_2734E936DFE5]
 
Evidence for a new post-translational modification in Staphylococcus aureus: Hydroxymethylation of asparagine and glutamine.
Waridel P., Ythier M., Gfeller A., Moreillon P., Quadroni M., 2012. Journal of Proteomics, 75 (6) pp. 1742-1751.
[DOI][WoS][Pmid][serval:BIB_DB18CCA01E89]
 
Exposure to solute stress affects genome-wide expression but not the polycyclic aromatic hydrocarbon-degrading activity of Sphingomonas sp. strain LH128 in biofilms.
Fida T.T., Breugelmans P., Lavigne R., Coronado E., Johnson D.R., van der Meer J.R., Mayer A.P., Heipieper H.J., Hofkens J., Springael D., 2012. Applied and Environmental Microbiology, 78 (23) pp. 8311-8320.
[DOI][WoS][Pmid][serval:BIB_A6551D5DB05A]
 
Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria.
Siegfried K., Endes C., Bhuiyan A.F., Kuppardt A., Mattusch J., van der Meer J.R., Chatzinotas A., Harms H., 2012. Environmental Science and Technology, 46 (6) pp. 3281-3287.
[DOI][WoS][Pmid][serval:BIB_470EFE2AD81B]
Fission yeast Sec3 and Exo70 are transported on actin cables and localize the exocyst complex to cell poles.
Bendezú F.O., Vincenzetti V., Martin S.G., 2012. PLoS One, 7 (6) pp. e40248.
[URN][DOI][WoS][Pmid][serval:BIB_89C1BA2A0C75]
 
Fission yeast: in shape to divide.
Hachet O., Bendezú F.O., Martin S.G., 2012. Current Opinion in Cell Biology, 24 (6) pp. 858-864.
[DOI][WoS][Pmid][serval:BIB_1F3B2C0FF957]
Genome-Wide Analysis of Salicylate and Dibenzofuran Metabolism in Sphingomonas Wittichii RW1.
Coronado E., Roggo C., Johnson D.R., van der Meer J.R., 2012. Frontiers in Microbiology, 3 p. 300.
[URN][DOI][WoS][Pmid][serval:BIB_45EC0FCE50E2]
 
High-dose daptomycin plus fosfomycin is safe and effective in treating methicillin-susceptible and methicillin-resistant Staphylococcus aureus endocarditis.
Miró J.M., Entenza J.M., Del Río A., Velasco M., Castañeda X., Garcia de la Mària C., Giddey M., Armero Y., Pericàs J.M., Cervera C. et al., 2012. Antimicrobial Agents and Chemotherapy, 56 (8) pp. 4511-4515. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7B56DF392269]
 
Inner-membrane transporters for the siderophores pyochelin in Pseudomonas aeruginosa and enantio-pyochelin in Pseudomonas fluorescens display different enantioselectivities.
Reimmann C., 2012. Microbiology, 158 (Pt 5) pp. 1317-1324.
[DOI][WoS][Pmid][serval:BIB_8C971D27A331]
Myosin Vs organize actin cables in fission yeast.
Lo Presti L., Chang F., Martin S.G., 2012. Molecular Biology of the Cell, 23 (23) pp. 4579-4591.
[URN][DOI][WoS][Pmid][serval:BIB_28A16B3E9069]
Novel targets of the CbrAB/Crc carbon catabolite control system revealed by transcript abundance in Pseudomonas aeruginosa.
Sonnleitner E., Valentini M., Wenner N., Haichar Fel Z, Haas D., Lapouge K., 2012. PLoS One, 7 (10) pp. e44637. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_C4DE67653221]
 
Persistence of a biocontrol Pseudomonas inoculant as high populations of culturable and non-culturable cells in 200-cm-deep soil profiles
Troxler J., Svercel M., Natsch A., Zala M., Keel C., Moënne-Loccoz Y., Défago G., 2012. Soil Biology and Biochemistry, 44 (1) pp. 122-129.
[DOI][WoS][serval:BIB_9B2C4D53447C]
 
Phenotypic switching in Pseudomonas brassicacearum involves GacS- and GacA-dependent Rsm small RNAs.
Lalaouna D., Fochesato S., Sanchez L., Schmitt-Kopplin P., Haas D., Heulin T., Achouak W., 2012. Applied and Environmental Microbiology, 78 (6) pp. 1658-1665.
[DOI][WoS][Pmid][serval:BIB_8429312A4244]
 
ppGpp controlled by the Gac/Rsm regulatory pathway sustains biocontrol activity in Pseudomonas fluorescens CHA0.
Takeuchi K., Yamada K., Haas D., 2012. Molecular Plant-microbe Interactions, 25 (11) pp. 1440-1449.
[DOI][WoS][Pmid][serval:BIB_C8FF33DED1AB]
 
Proteomic and transcriptomic profiling of Staphylococcus aureus surface LPXTG-proteins: correlation with agr genotypes and adherence phenotypes.
Ythier M., Resch G., Waridel P., Panchaud A., Gfeller A., Majcherczyk P., Quadroni M., Moreillon P., 2012. Molecular and Cellular Proteomics, 11 (11) pp. 1123-1139. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_ED98E07ED10F]
 
Regulation of chromosomal replication in Caulobacter crescentus.
Collier J., 2012. Plasmid, 67 (2) pp. 76-87.
[DOI][WoS][Pmid][serval:BIB_F502766183C8]
 
Reversible and irreversible pollutant-induced bacterial cellular stress effects measured by ethidium bromide uptake and efflux.
Czechowska K., van der Meer J.R., 2012. Environmental Science and Technology, 46 (2) pp. 1201-1208.
[DOI][WoS][Pmid][serval:BIB_A2708E1774B4]
 
The Pseudomonas aeruginosa toxin L-2-amino-4-methoxy-trans-3-butenoic acid inhibits growth and induces encystment in Acanthamoeba castellanii.
Lee X., Reimmann C., Greub G., Sufrin J., Croxatto A., 2012. Microbes and Infection, 14 (3) pp. 268-272.
[DOI][WoS][Pmid][serval:BIB_6EA8442A5490]
Vancomycin-intermediate Staphylococcus aureus selected during vancomycin therapy of experimental endocarditis are not detected by culture-based diagnostic procedures and persist after treatment arrest.
Moreillon P., Bizzini A., Giddey M., Vouillamoz J., Entenza J.M., 2012. Journal of Antimicrobial Chemotherapy, 67 (3) pp. 652-660.
[URN][DOI][WoS][Pmid][serval:BIB_547D1AEC93C1]
2011
 
A dual functional origin of transfer in the ICEclc genomic island of Pseudomonas knackmussii B13.
Miyazaki R., van der Meer J.R., 2011. Molecular Microbiology, 79 (3) pp. 743-758.
[DOI][WoS][Pmid][serval:BIB_BB1C7BF33938]
 
A flow cytometry based oligotrophic pollutant exposure test to detect bacterial growth inhibition and cell injury.
Czechowska K., van der Meer J.R., 2011. Environmental Science and Technology, 45 (13) pp. 5820-5827.
[DOI][WoS][Pmid][serval:BIB_33320468370A]
A phosphorylation cycle shapes gradients of the DYRK family kinase Pom1 at the plasma membrane.
Hachet O., Berthelot-Grosjean M., Kokkoris K., Vincenzetti V., Moosbrugger J., Martin S.G., 2011. Cell, 145 (7) pp. 1116-1128. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_523F78C4557D]
 
A stable phage lysin (Cpl-1) dimer with increased antipneumococcal activity and decreased plasma clearance.
Resch G., Moreillon P., Fischetti V.A., 2011. International Journal of Antimicrobial Agents, 38 (6) pp. 516-521.
[DOI][WoS][Pmid][serval:BIB_093242ED7AD8]
A statistical methodology for the comparison of blue gel pen inks analyzed by laser desorption/ionization mass spectrometry
Weyermann C., Bucher L., Majcherczyk P., 2011. Science & Justice, 51 (3) pp. 122-130. Peer-reviewed.
[URN][DOI][WoS][serval:BIB_8E07357CF840]
 
Antibacterial burst-release from minimal Ag-containing plasma polymer coatings.
Lischer S., Körner E., Balazs D.J., Shen D., Wick P., Grieder K., Haas D., Heuberger M., Hegemann D., 2011. Journal of the Royal Society Interface, 8 (60) pp. 1019-1030.
[DOI][WoS][Pmid][serval:BIB_C9BCAB90C33D]
 
Association between valvular surgery and mortality among patients with infective endocarditis complicated by heart failure.
Kiefer T., Park L., Tribouilloy C., Cortes C., Casillo R., Chu V., Delahaye F., Durante-Mangoni E., Edathodu J., Falces C. et al., 2011. JAMA, 306 (20) pp. 2239-2247.
[DOI][WoS][Pmid][serval:BIB_700CDA8157D9]
 
Azithromycin inhibits expression of the GacA-dependent small RNAs RsmY and RsmZ in Pseudomonas aeruginosa.
Pérez-Martínez I., Haas D., 2011. Antimicrobial Agents and Chemotherapy, 55 (7) pp. 3399-3405.
[DOI][WoS][Pmid][serval:BIB_3BB70A2DCA8F]
 
Bacterial subfamily of LuxR regulators that respond to plant compounds.
Subramoni S., Gonzalez J.F., Johnson A., Péchy-Tarr M., Rochat L., Paulsen I., Loper J.E., Keel C., Venturi V., 2011. Applied and Environmental Microbiology, 77 (13) pp. 4579-4588.
[DOI][WoS][Pmid][serval:BIB_8A616FE9BFDA]
Characterisation of the putative effector interaction site of the regulatory HbpR protein from Pseudomonas azelaica by site-directed mutagenesis.
Vogne C., Bisht H., Arias S., Fraile S., Lal R., van der Meer J.R., 2011. PLoS One, 6 (2) pp. e16539.
[URN][DOI][WoS][Pmid][serval:BIB_EB607C562CAB]
 
Continuous infusion may improve the efficacy of vancomycin in treatment of experimental endocarditis due to heterogeneous vancomycin-intermediate Staphylococcus aureus.
Pea F., Cojutti P., Petrosillo N., Furlanut M., Entenza J.M., Veloso T.R., Vouillamoz J., Giddey M., Moreillon P., 2011. Antimicrobial Agents and Chemotherapy, 55 (9) pp. 4496; author reply 4496-4496; author reply 4497.
[DOI][Pmid][serval:BIB_6DF485773E58]
 
Deconstructing the cell cycle.
Martin S., 2011. Nature Reviews. Molecular Cell Biology, 12 (11) p. 689.
[DOI][WoS][Pmid][serval:BIB_4CCB594737EA]
 
Development of a microfluidics biosensor for agarose-bead immobilized Escherichia coli bioreporter cells for arsenite detection in aqueous samples.
Buffi N., Merulla D., Beutier J., Barbaud F., Beggah S., van Lintel H., Renaud P., van der Meer J.R., 2011. Lab On A Chip, 11 (14) pp. 2369-2377.
[DOI][WoS][Pmid][serval:BIB_97E35BF48444]
 
Development of bioreporter assays for the detection of bioavailability of long-chain alkanes based on the marine bacterium Alcanivorax borkumensis strain SK2.
Kumari R., Tecon R., Beggah S., Rutler R., Arey J.S., van der Meer J.R., 2011. Environmental Microbiology, 13 (10) pp. 2808-2819.
[DOI][WoS][Pmid][serval:BIB_8B3CADD159D3]
 
Essais en plein champ avec du blé génétiquement modifié résistant à l'oïdium = Freilandversuche mit gentechnisch verändertem Weizen mit Mehltauresistenz = Field trials with genetically modified powdery mildew-resistant wheat
Foetzki A., Winzeler M., Boller T., Felber F., Gruissem G., Keel C., Keller B., Mascher F., Maurhofer M., Nentwig W. et al., 2011. Recherche Agronomique Suisse, 2 (10) pp. 446-453.
[WoS][serval:BIB_8D1D962CD542]
 
Failure of vancomycin continuous infusion against experimental endocarditis due to vancomycin-intermediate Staphylococcus aureus.
Entenza J.M., Veloso T.R., Vouillamoz J., Giddey M., Moreillon P., 2011. Antimicrobial Agents and Chemotherapy, 55 (1) pp. 385-387. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_13C7B4B119E1]
Histone deacetylase inhibitors impair antibacterial defenses of macrophages.
Mombelli M., Lugrin J., Rubino I., Chanson A.L., Giddey M., Calandra T., Roger T., 2011. Journal of Infectious Diseases, 204 (9) pp. 1367-1374.
[URN][DOI][WoS][Pmid][serval:BIB_B919DFAC5DBD]
 
How can a dual oriT system contribute to efficient transfer of an integrative and conjugative element?
Miyazaki R., van der Meer J.R., 2011. Mobile Genetic Elements, 1 (1) pp. 82-84.
[DOI][Pmid][serval:BIB_BEC5C28504DD]
 
Identification of C(4)-dicarboxylate transport systems in Pseudomonas aeruginosa PAO1.
Valentini M., Storelli N., Lapouge K., 2011. Journal of Bacteriology, 193 (17) pp. 4307-4316. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_7AE6709D7CDD]
 
In vivo synergism of ceftobiprole and vancomycin against experimental endocarditis due to vancomycin-intermediate Staphylococcus aureus.
Entenza J.M., Veloso T.R., Vouillamoz J., Giddey M., Majcherczyk P., Moreillon P., 2011. Antimicrobial Agents and Chemotherapy, 55 (9) pp. 3977-3984.
[DOI][WoS][Pmid][serval:BIB_2223C92483EB]
 
Induction of experimental endocarditis by continuous low-grade bacteremia mimicking spontaneous bacteremia in humans.
Veloso T.R., Amiguet M., Rousson V., Giddey M., Vouillamoz J., Moreillon P., Entenza J.M., 2011. Infection and Immunity, 79 (5) pp. 2006-2011.
[DOI][WoS][Pmid][serval:BIB_B34D621B640D]
 
Infective endocarditis.
Que Y.A., Moreillon P., 2011. Nature Reviews. Cardiology, 8 (6) pp. 322-336.
[DOI][WoS][Pmid][serval:BIB_FD31EF5E5DD4]
Iron acquisition with the natural siderophore enantiomers pyochelin and enantio-pyochelin in Pseudomonas species.
Youard Z.A., Wenner N., Reimmann C., 2011. Biometals, 24 (3) pp. 513-522.
[URN][DOI][WoS][Pmid][serval:BIB_EA42BFAB130C]
 
Link between genotype and antimicrobial resistance in bovine mastitis-related Staphylococcus aureus strains, determined by comparing Swiss and French isolates from the Rhône Valley.
Sakwinska O., Morisset D., Madec J.Y., Waldvogel A., Moreillon P., Haenni M., 2011. Applied and Environmental Microbiology, 77 (10) pp. 3428-3432.
[DOI][WoS][Pmid][serval:BIB_8CC32A7B5B1F]
 
Methicillin-susceptible Staphylococcus aureus endocarditis isolates are associated with clonal complex 30 genotype and a distinct repertoire of enterotoxins and adhesins.
Nienaber J.J., Sharma Kuinkel B.K., Clarke-Pearson M., Lamlertthon S., Park L., Rude T.H., Barriere S., Woods C.W., Chu V.H., Marín M. et al., 2011. Journal of Infectious Diseases, 204 (5) pp. 704-713.
[DOI][WoS][Pmid][serval:BIB_C4EBDB424993]
 
Miniaturized bacterial biosensor system for arsenic detection holds great promise for making integrated measurement device.
Buffi N., Merulla D., Beutier J., Barbaud F., Beggah S., van Lintel H., Renaud P., van der Meer J.R., 2011. Bioengineered Bugs, 2 (5) pp. 296-298.
[DOI][Pmid][serval:BIB_FC72B353364A]
Molecular characterization of a Streptococcus gallolyticus genomic island encoding a pilus involved in endocarditis.
Danne C., Entenza J.M., Mallet A., Briandet R., Débarbouillé M., Nato F., Glaser P., Jouvion G., Moreillon P., Trieu-Cuot P. et al., 2011. Journal of Infectious Diseases, 204 (12) pp. 1960-1970.
[URN][DOI][WoS][Pmid][serval:BIB_0BD03C47D968]
On the virtues and dangers of models.
Haas D., 2011. FEMS Microbiology Reviews, 35 (1) pp. 1-2.
[URN][DOI][WoS][Pmid][serval:BIB_4BD637122798]
 
Oral insecticidal activity of root colonizing Pseudomonas fluorescens CHA0: a biocontrol agent with potential to control plant pests and diseases
Maurhofer M., Ruffner B., Péchy-Tarr M., Rindlisbacher A., Obrist C., Hoegger P., Keel C., 2011. pp. 67-70 dans Ehlers R.U., Crickmore N., Enkerli J., Glazer I., Kirchmair M., Lopez-Ferber M., Neuhauser S., Strasser H., Tkaczuk C., Traugott M. (eds.) Biological Control in IPM Systems, IOBC wprs bulletin. Peer-reviewed, INRA / Unité de pathologie végétale.
[serval:BIB_103A9D9C5536]
PEGylating a bacteriophage endolysin inhibits its bactericidal activity.
Resch G., Moreillon P., Fischetti V.A., 2011. AMB Express, 1 p. 29.
[URN][DOI][WoS][Pmid][serval:BIB_2134A42564B3]
 
Phylogenetic position of Fit insect toxin producing pseudomonads
Ruffner B, Péchy-Tarr M, Ryffel F, Keel C, Maurhofer M, 2011. pp. 71-74 dans Ehlers R.U., Crickmore N., Enkerli J., Glazer I., Kirchmair M., Lopez-Ferber M., Neuhauser S., Strasser H., Tkaczuk C., Traugott M. (eds.) Biological Control in IPM Systems, IOBC wprs bulletin. Peer-reviewed, INRA / Unité de pathologie végétale.
[serval:BIB_F98516CD507B]
 
Plant- and microbe-derived compounds affect the expression of genes encoding antifungal compounds in a pseudomonad with biocontrol activity.
de Werra P., Huser A., Tabacchi R., Keel C., Maurhofer M., 2011. Applied and Environmental Microbiology, 77 (8) pp. 2807-2812.
[DOI][WoS][Pmid][serval:BIB_DFE1BCA5CF9B]
 
Plants respond to pathogen infection by enhancing the antifungal gene expression of root-associated bacteria.
Jousset A., Rochat L., Lanoue A., Bonkowski M., Keel C., Scheu S., 2011. Molecular Plant-Microbe Interactions, 24 (3) pp. 352-358.
[DOI][WoS][Pmid][serval:BIB_B0AFD1ACA21B]
 
Promoter recognition and activation by the global response regulator CbrB in Pseudomonas aeruginosa.
Abdou L., Chou H.T., Haas D., Lu C.D., 2011. Journal of Bacteriology, 193 (11) pp. 2784-2792.
[DOI][WoS][Pmid][serval:BIB_9F010FA5017F]
 
Pyochelin enantiomers and their outer-membrane siderophore transporters in fluorescent pseudomonads: structural bases for unique enantiospecific recognition.
Brillet K., Reimmann C., Mislin G.L., Noël S., Rognan D., Schalk I.J., Cobessi D., 2011. Journal of the American Chemical Society, 133 (41) pp. 16503-16509.
[DOI][WoS][Pmid][serval:BIB_15836ECC6AC4]
 
Pyrroloquinoline quinone biosynthesis gene pqqC, a novel molecular marker for studying the phylogeny and diversity of phosphate-solubilizing pseudomonads.
Meyer J.B., Frapolli M., Keel C., Maurhofer M., 2011. Applied and Environmental Microbiology, 77 (20) pp. 7345-7354.
[DOI][WoS][Pmid][serval:BIB_82CAC5FAD2DA]
Regulation of the Activity of the Dual-Function DnaA Protein in Caulobacter crescentus.
Fernandez-Fernandez C., Gonzalez D., Collier J., 2011. PLoS One, 6 (10) pp. e26028. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_92298CDFBFC2]
Shaping fission yeast cells by rerouting actin-based transport on microtubules.
Lo Presti L., Martin S.G., 2011. Current Biology, 21 (24) pp. 2064-2069. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_A218303AEC87]
 
Small RNAs as regulators of primary and secondary metabolism in Pseudomonas species.
Sonnleitner E., Haas D., 2011. Applied Microbiology and Biotechnology, 91 (1) pp. 63-79.
[DOI][WoS][Pmid][serval:BIB_2D323B6AD373]
 
Staphylococcus aureus host range and human-bovine host shift.
Sakwinska O., Giddey M., Moreillon M., Morisset D., Waldvogel A., Moreillon P., 2011. Applied and Environmental Microbiology, 77 (17) pp. 5908-5915.
[DOI][WoS][Pmid][serval:BIB_B493BE5305DE]
 
The small RNA PhrS stimulates synthesis of the Pseudomonas aeruginosa quinolone signal.
Sonnleitner E., Gonzalez N., Sorger-Domenigg T., Heeb S., Richter A.S., Backofen R., Williams P., Hüttenhofer A., Haas D., Bläsi U., 2011. Molecular Microbiology, 80 (4) pp. 868-885.
[DOI][WoS][Pmid][serval:BIB_9ED9F56F63CD]
Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacterium Sphingomonas wittichii.
Johnson D.R., Coronado E., Moreno-Forero S.K., Heipieper H.J., van der Meer J.R., 2011. BMC Microbiology, 11 (1) p. 250.
[URN][DOI][WoS][Pmid][serval:BIB_7D06CCB4205A]
 
Transcriptomic analysis of phenanthrene degrading Sphingomonas biofilms exposed to environmentally relevant solute and matric stresses.
Fida T.T., Breugelmans P., Lavigne R., Coronado E., Johnson D., Van Der Meer J.R., Mayer A., Hofkens J., Springael D., 2011. Communications in Agricultural and Applied Biological Sciences, 76 (1) pp. 69-72.
[Pmid][serval:BIB_AEA8E9CEE052]
2010
 
Role of MyD88 and Toll-like receptors 2 and 4 in the sensing of Parachlamydia acanthamoebae.
Roger T., Casson N., Croxatto A., Entenza J.M., Pusztaszeri M., Akira S., Reymond M.K., Le Roy D., Calandra T., Greub G., 2010/12. Infection and immunity, 78 (12) pp. 5195-5201. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C3E61D584C70]
 
A new factor stimulating peptidoglycan hydrolysis to separate daughter cells in Caulobacter crescentus.
Collier J., 2010. Molecular Microbiology, 77 (1) pp. 11-14. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4977DAC0E5E6]
 
A single mutation in enzyme I of the sugar phosphotransferase system confers penicillin tolerance to Streptococcus gordonii.
Bizzini A., Entenza J.M., Michielin O., Arnold I., Erni B., Moreillon P., 2010. Antimicrobial Agents and Chemotherapy, 54 (1) pp. 259-266.
[DOI][WoS][Pmid][serval:BIB_1D1C379268F2]
 
Association of hemolytic activity of Pseudomonas entomophila, a versatile soil bacterium, with cyclic lipopeptide production.
Vallet-Gely I., Novikov A., Augusto L., Liehl P., Bolbach G., Péchy-Tarr M., Cosson P., Keel C., Caroff M., Lemaitre B., 2010. Applied and environmental microbiology, 76 (3) pp. 910-921. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_10DA8D7C9A81]
 
Bacterial bioreporter assays to measure hydrocarbons
Tecon R., Beggah S., van der Meer J. R., 2010. pp. 3642-3652 dans Timmis K. N. (eds.) Handbook of hydrocarbon and lipid microbiology chap. 24, Springer.
[DOI][serval:BIB_700D794058C7]
 
Bacterial sensors: synthetic design and application principles
van der Meer J.R., 2010. Synthesis Lectures on Synthetic Biology 167, Morgan & Claypool Publ..
[DOI][serval:BIB_B2F2FE9B85C9]
Bonds between fibronectin and fibronectin-binding proteins on Staphylococcus aureus and Lactococcus lactis.
Buck A.W., Fowler V.G., Yongsunthon R., Liu J., DiBartola A.C., Que Y.A., Moreillon P., Lower S.K., 2010. Langmuir, 26 (13) pp. 10764-10770.
[URN][DOI][WoS][Pmid][serval:BIB_7B4C52AFB29D]
 
Characterisation of microbial communities colonising the hyphal surfaces of arbuscular mycorrhizal fungi.
Scheublin T.R., Sanders I.R., Keel C., van der Meer J.R., 2010. ISME Journal, 4 (6) pp. 752-763.
[DOI][WoS][Pmid][serval:BIB_0DF7E6CB4E97]
 
Chloroplastic phosphoadenosine phosphosulfate metabolism regulates basal levels of the prohormone jasmonic acid in Arabidopsis leaves.
Rodríguez V.M., Chételat A., Majcherczyk P., Farmer E.E., 2010. Plant Physiology, 152 (3) pp. 1335-1345. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8D4BAE61CE94]
 
Combination of fluorescent reporters for simultaneous monitoring of root colonization and antifungal gene expression by a biocontrol pseudomonad on cereals with flow cytometry.
Rochat L., Péchy-Tarr M., Baehler E., Maurhofer M., Keel C., 2010. Molecular Plant-Microbe Interactions, 23 (7) pp. 949-961.
[DOI][WoS][Pmid][serval:BIB_7EE75A031FD2]
 
Combined use of fluorescent reporters and flow cytometry for simultaneous monitoring of bacterial growth and gene expression on plant roots
Rochat L., Péchy-Tarr M, Maurhofer M., Keel C., 2010. pp. 3461-3470 dans Timmis K. N. (eds.) Handbook of hydrocarbon and lipid microbiology chap. 7, Springer.
[DOI][serval:BIB_E10BD8E0B142]
 
Development of a multistrain bacterial bioreporter platform for the monitoring of hydrocarbon contaminants in marine environments.
Tecon R., Beggah S., Czechowska K., Sentchilo V., Chronopoulou P.M., McGenity T.J., van der Meer J.R., 2010. Environmental science and technology, 44 (3) pp. 1049-1055. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4DFCA9B14DB6]
 
Ecological temporal stability of Staphylococcus aureus nasal carriage.
Sakwinska O., Blanc D.S., Lazor-Blanchet C., Moreillon M., Giddey M., Moreillon P., 2010. Journal of Clinical Microbiology, 48 (8) pp. 2724-2728.
[DOI][WoS][Pmid][serval:BIB_87816D8E6F69]
Effect of two types of biosurfactants on phenanthrene availability to the bacterial bioreporter Burkholderia sartisoli strain RP037.
Tecon R., van der Meer J.R., 2010. Applied microbiology and biotechnology, 85 (4) pp. 1131-1139. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B7567FDB5CBA]
 
Endocarditis and endarteritis
Moreillon P., 2010. pp. 514-528 dans Cohen J., Opal S.M., Powderly W.G. (eds.) Infectious diseases chap. 47, Mosby.
[serval:BIB_0687F2DE296A]
 
GacA-controlled activation of promoters for small RNA genes in Pseudomonas fluorescens.
Humair B., Wackwitz B., Haas D., 2010. Applied and Environmental Microbiology, 76 (5) pp. 1497-1506. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_718E837C59E0]
 
Identification of the biosynthetic gene cluster for the Pseudomonas aeruginosa antimetabolite L-2-amino-4-methoxy-trans-3-butenoic acid.
Lee X., Fox A., Sufrin J., Henry H., Majcherczyk P., Haas D., Reimmann C., 2010. Journal of Bacteriology, 192 (16) pp. 4251-4255.
[DOI][WoS][Pmid][serval:BIB_7561C44C2B0E]
 
In vitro prevention of the emergence of daptomycin resistance in Staphylococcus aureus and enterococci following combination with amoxicillin/clavulanic acid or ampicillin.
Entenza J.M., Giddey M., Vouillamoz J., Moreillon P., 2010. International Journal of Antimicrobial Agents, 35 (5) pp. 451-456.
[DOI][WoS][Pmid][serval:BIB_76F93D9F3E25]
 
Interplay between wheat cultivars, biocontrol pseudomonads, and soil.
Meyer J.B., Lutz M.P., Frapolli M., Péchy-Tarr M., Rochat L., Keel C., Défago G., Maurhofer M., 2010. Applied and Environmental Microbiology, 76 (18) pp. 6196-6204.
[DOI][WoS][Pmid][serval:BIB_2908476D9442]
 
Let the sun shine.
van der Meer J.R., 2010. Current Opinion in Biotechnology, 21 (3) pp. 235-237.
[DOI][WoS][Pmid][serval:BIB_2F5A7BB67DF9]
 
Microcolony growth assays
Reinhard F., van der Meer J. R., 2010. pp. 3562-3570 dans Timmis K. N. (eds.) Handbook of hydrocarbon and lipid microbiology chap. 16, Springer.
[DOI][serval:BIB_EC257933284F]
 
MRSA ST398 in Switzerland : not only colonization of pigs and pig workers but also cow mastitis
Sakwinska Olga, Oppliger Anne, Giddey Marlyse, Morisset Delphine, Moreillon Martine, Waldvogel Andreas, Moreillon Philippe, 2010. pp. ENA-1 dans Immunology and Cancer, CHUV Research Day, January 28, 2010, CHUV Research Day, Université de Lausanne, Faculté de biologie et de médecine.
[serval:BIB_10C4D52EDE0A]
 
Natural variability of in vitro adherence to fibrinogen and fibronectin does not correlate with in vivo infectivity of Staphylococcus aureus.
Ythier M., Entenza J.M., Bille J., Vandenesch F., Bes M., Moreillon P., Sakwinska O., 2010. Infection and Immunity, 78 (4) pp. 1711-1716.
[DOI][WoS][Pmid][serval:BIB_7071ACD79BF6]
On the expanding, then contracting scope of scientific publications.
Haas D., 2010. FEMS Microbiology Reviews, 34 (1) pp. 1-2.
[URN][DOI][WoS][Pmid][serval:BIB_94B529856C56]
 
Penicillin-binding protein gene alterations in Streptococcus uberis isolates presenting decreased susceptibility to penicillin.
Haenni M., Galofaro L., Ythier M., Giddey M., Majcherczyk P., Moreillon P., Madec J.Y., 2010. Antimicrobial Agents and Chemotherapy, 54 (3) pp. 1140-1145.
[DOI][WoS][Pmid][serval:BIB_95A97598C7F8]
 
Predator-prey chemical warfare determines the expression of biocontrol genes by rhizosphere-associated Pseudomonas fluorescens.
Jousset A., Rochat L., Scheu S., Bonkowski M., Keel C., 2010. Applied and Environmental Microbiology, 76 (15) pp. 5263-5268. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0F10B0E2BDB9]
Prospective monitoring of cefepime in intensive care unit adult patients.
Chapuis T.M., Giannoni E., Majcherczyk P.A., Chioléro R., Schaller M.D., Berger M.M., Bolay S., Décosterd L.A., Bugnon D., Moreillon P., 2010. Critical Care, 14 (2) pp. R51.
[URN][DOI][WoS][Pmid][serval:BIB_AE78D4090BA8]
 
Random and site-directed mutagenesis of transcriptional regulator proteins implicated in hydrocarbon degradation pathways
Vogne C., Beggah S., van der Meer J. R., 2010. pp. 4430-4444 dans Timmis K. N. (eds.) Handbook of hydrocarbon and lipid microbiology chap. 83, Springer.
[DOI][serval:BIB_005831520FFD]
 
Response to Comment on "Unlike PAHs from Exxon Valdez Crude Oil, PAHs from Gulf of Alaska Coals are not Readily Bioavailable".
Deepthike H.U., Tecon R., Kooten G.K., Meer J.R., Harms H., Wells M., Short J., 2010. Environmental Science and Technology, 44 (6) pp. 2212-2213.
[DOI][WoS][Pmid][serval:BIB_5B194F33F0E7]
 
Small RNAs in Pseudomonas spp.
Sonnleitner E., González N., Haas D., 2010. pp. 3-28 dans Ramos J.-L., Filloux A. (eds.) Pseudomonas: molecular microbiology, infection and biodiversity chap. 1, Springer.
[DOI][serval:BIB_1EB995132BBE]
 
Staphylococcus aureus (Including Staphylococcal Toxic Shock)
Que Y.A., Moreillon P., 2010. pp. 2543-2578 dans Mandell G.L., Bennett J.E., Dolin R. (eds.) Mandell, Douglas, and Bennett's Principles and Practice of Infectious Diseases chap. 195, Churchill Livingstone Elsevier.
[serval:BIB_B4B6D68E3171]
 
Stereospecific recognition of pyochelin and enantio-pyochelin by the PchR proteins in fluorescent pseudomonads.
Youard Z.A., Reimmann C., 2010. Microbiology, 156 (6) pp. 1772-1782. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_63BA28F2E25F]
 
The SOS screen in Arabidopsis: a search for functions involved in DNA metabolism.
Siaud N., Dubois E., Massot S., Richaud A., Dray E., Collier J., Doutriaux M.P., 2010. DNA Repair, 9 (5) pp. 567-578. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9BF9F06ECF61]
Transcriptome analysis of the mobile genome ICEclc in Pseudomonas knackmussii B13.
Gaillard M., Pradervand N., Minoia M., Sentchilo V., Johnson D.R., van der Meer J.R., 2010. BMC Microbiology, 10 p. 153.
[URN][DOI][WoS][Pmid][serval:BIB_4301FC5CF60A]
 
Where microbiology meets microengineering: design and applications of reporter bacteria.
van der Meer J.R., Belkin S., 2010. Nature Reviews. Microbiology, 8 (7) pp. 511-522.
[DOI][WoS][Pmid][serval:BIB_44099BB15053]
2009
Clinical presentation, etiology, and outcome of infective endocarditis in the 21st century: the International Collaboration on Endocarditis-Prospective Cohort Study.
Murdoch D.R., Corey G.R., Hoen B., Miró J.M., Fowler V.G., Bayer A.S., Karchmer A.W., Olaison L., Pappas P.A., Moreillon P. et al., 2009/03/09. Archives of internal medicine, 169 (5) pp. 463-473. Peer-reviewed.
[URN][DOI][Pmid][serval:BIB_0F3EE5A4E73C]
Clinical consensus conference: survey on Gram-positive bloodstream infections with a focus on Staphylococcus aureus.
Naber C.K., Baddour L.M., Giamarellos-Bourboulis E.J., Gould I.M., Herrmann M., Hoen B., Karchmer A.W., Kobayashi Y., Kozlov R.S., Lew D. et al., 2009. Clinical infectious diseases, 48 Suppl 4 pp. S260-S270.
[URN][DOI][WoS][Pmid][serval:BIB_2F8AEE0AE915]
 
Contribution of (sub)domains of Staphylococcus aureus fibronectin-binding protein to the proinflammatory and procoagulant response of human vascular endothelial cells.
Heying R., van de Gevel J., Que Y.A., Piroth L., Moreillon P., Beekhuizen H., 2009. Thrombosis and Haemostasis, 101 (3) pp. 495-504. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AE718F07FC46]
Copper acquisition by the SenC protein regulates aerobic respiration in Pseudomonas aeruginosa PAO1.
Frangipani E., Haas D., 2009. FEMS microbiology letters, 298 (2) pp. 234-240. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_8FED5154B9BB]
Development of bacteria-based bioassays for arsenic detection in natural waters.
Diesel E., Schreiber M., van der Meer J.R., 2009. Analytical and Bioanalytical Chemistry, 394 (3) pp. 687-693. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_52FEEDE4E201]
 
Double-tagged fluorescent bacterial bioreporter for the study of polycyclic aromatic hydrocarbon diffusion and bioavailability.
Tecon R., Binggeli O., van der Meer J.R., 2009. Environmental Microbiology, 11 (9) pp. 2271-2283.
[DOI][WoS][Pmid][serval:BIB_9835D80F2A1F]
 
Efficacy of iclaprim against wild-type and thymidine kinase-deficient methicillin-resistant Staphylococcus aureus isolates in an in vitro fibrin clot model.
Entenza J.M., Haldimann A., Giddey M., Lociuro S., Hawser S., Moreillon P., 2009. Antimicrobial Agents and Chemotherapy, 53 (9) pp. 3635-3641.
[DOI][WoS][Pmid][serval:BIB_426271D5C34A]
 
Epigenetic regulation of the bacterial cell cycle.
Collier J., 2009. Current Opinion in Microbiology, 12 (6) pp. 722-729. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C83FABFCF4E1]
 
Exposition aux Staphylococcus aureus résistant à la méthicilline (MRSA) et autres bioaérosols dans les élevages de porcs en Suisse
Oppliger Anne, Giddey Marlyse, Charrière Nicole, Sakwinska Olga, 2009. pp. 588-589 dans XXIIIe Journées franco-suisses de médecine et santé au travail, Chambéry, 18-19 juin 2009, Archives des maladies professionnelles et de l'environnement. Peer-reviewed.
[serval:BIB_D7CE511F041D]
 
Feedback control of DnaA-mediated replication initiation by replisome-associated HdaA protein in Caulobacter.
Collier J., Shapiro L., 2009. Journal of bacteriology, 191 (18) pp. 5706-5716. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_AF078859333C]
From the Chief Editor
Haas Dieter, 2009. FEMS Microbiology Reviews, 33 (2) pp. 257-257.
[URN][DOI][WoS][serval:BIB_195831B52D3F]
 
Functional GacS in Pseudomonas DSS73 prevents digestion by Caenorhabditis elegans and protects the nematode from killer flagellates.
Bjørnlund L., Rønn R., Péchy-Tarr M., Maurhofer M., Keel C., Nybroe O., 2009. The ISME journal, 3 (7) pp. 770-779. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_EFA5D6078768]
 
Genetic diversity and ecological success of Staphylococcus aureus strains colonizing humans.
Sakwinska O., Kuhn G., Balmelli C., Francioli P., Giddey M., Perreten V., Riesen A., Zysset F., Blanc D.S., Moreillon P., 2009. Applied and Environmental Microbiology, 75 (1) pp. 175-183. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_925E90B9602D]
 
Genotype-level interactions determine the degree of reduction of leaf rust on wheat by seed application of beneficial Pseudomonas spp.
Sharifi-Tehrani A., Kellenberger S., Farzaneh M., Pechy-Tarr M., Keel C., Mascher F., 2009. IOBC/WPRS Bulletin, 43 pp. 321-325.
[serval:BIB_136203AE0F68]
 
Guidelines on the prevention, diagnosis, and treatment of infective endocarditis (new version 2009): the Task Force on the Prevention, Diagnosis, and Treatment of Infective Endocarditis of the European Society of Cardiology (ESC). Endorsed by the European Society of Clinical Microbiology and Infectious Diseases (ESCMID) and the International Society of Chemotherapy (ISC) for Infection and Cancer.
Habib G., Hoen B., Tornos P., Thuny F., Prendergast B., Vilacosta I., Moreillon P., de Jesus Antunes M., Thilen U., Lekakis J. et al., 2009. European Heart Journal, 30 (19) pp. 2369-2413.
[DOI][WoS][Pmid][serval:BIB_300F5A17C81C]
 
Health care-associated native valve endocarditis: importance of non-nosocomial acquisition.
Benito N., Miró J.M., de Lazzari E., Cabell C.H., del Río A., Altclas J., Commerford P., Delahaye F., Dragulescu S., Giamarellou H. et al., 2009. Annals of Internal Medicine, 150 (9) pp. 586-594.
[WoS][Pmid][serval:BIB_61A51B609E95]
 
Improved multiple-locus variable-number tandem-repeat assay for Staphylococcus aureus genotyping, providing a highly informative technique together with strong phylogenetic value.
Pourcel C., Hormigos K., Onteniente L., Sakwinska O., Deurenberg R.H., Vergnaud G., 2009. Journal of clinical microbiology, 47 (10) pp. 3121-3128.
[DOI][WoS][Pmid][serval:BIB_C54BAECDBFFB]
 
Insecticidal activity in root-associated pseudomonads
Péchy-Tarr M., Loper J. E., Maurhofer M., Keel C., 2009., IOBC/WPRS p. 166 dans Elad Y. (eds.) IOBC/WPRS Bulletin, IOBC/WPRS.
[serval:BIB_19D05FBDA35B]
 
Insecticidal activity in root-associated, plant-beneficial pseudomonads
Keel C., Maurhofer M., 2009., IOBC/WPRS p. 181 dans Ehlers R.U. (eds.) IOBC/WPRS Bulletin, IOBC/WPRS.
[serval:BIB_F93881C6749C]
 
Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13.
Sentchilo V., Czechowska K., Pradervand N., Minoia M., Miyazaki R., van der Meer J.R., 2009. Molecular microbiology, 72 (5) pp. 1293-1306. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_42A460EF5F13]
M-protein and other intrinsic virulence factors of Streptococcus pyogenes are encoded on an ancient pathogenicity island.
Panchaud A., Guy L., Collyn F., Haenni M., Nakata M., Podbielski A., Moreillon P., Roten C.A., 2009. BMC genomics, 10 p. 198. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_DE1F2114471F]
 
Methicillin-resistant Staphylococcus aureus (MRSA) : an occupational risk in pig farmers?
Oppliger Anne, Giddey Marlyse, Charrière Nicole, Semaani Eulalie, Blanc Dominique, Sakwinska Olga, 2009. pp. ENA-2 dans Genes and Diseases, CHUV Research Day, January 29, 2009, Université de Lausanne, Faculté de biologie et de médecine.
[serval:BIB_809A24B71531]
 
Molecular characterization of IAA-responsive mutants of plant-beneficial Pseudomonas fluorescens CHA0
Rochat L., Péchy-Tarr M., de Werra P., Maurhofer M., Keel C., 2009., IOBC/WPRS p. 67 dans Elad Y (eds.) IOBC/WPRS.
[serval:BIB_2A35B903393B]
 
Molecular Tools for Understanding and Improving Biocontrol
Yigal Elad Y., Maurhofer M., Keel C., Gessler C., Duffy B. (eds.), 2009., 43 390, IOBC/WPRS.
[serval:BIB_071C076D3014]
 
Molecular tools to analyze the influence of environmental factors on the genetic diversity and the plant-beneficial activity of root-colonizing pseudomonads
Meyer J., de Werra P., Frapolli M., Péchy-Tarr M., Rochat L., Keel C., Maurhofer M., 2009., IOBC/WPRS p. 336 dans Elad Y, Maurhofer M., Keel C., Gessler C., Duffy B. (eds.) IOBC/WPRS Bulletin, IOBC/WPRS.
[serval:BIB_D7BAC1EE76DC]
 
MRSA ST398 in Switzerland : not only colonization of pigs and pig workers but also cow mastitis
Sakwinska Olga, Oppliger Anne, Giddey Marlyse, Morisset Delphine, Moreillon Martine, Waldvogel Andreas, Moreillon Philippe, 2009. pp. 18B, 34 dans Methicillin-Resistant Staphylococci in Animals : veterinary and public health implications : ASM Conferences, September 22-25, 2009, London, England, American Society for Microbiology.
[serval:BIB_8512627ECF1A]
MsrR contributes to cell surface characteristics and virulence in Staphylococcus aureus.
Hübscher J., McCallum N., Sifri C.D., Majcherczyk P.A., Entenza J.M., Heusser R., Berger-Bächi B., Stutzmann Meier P., 2009. FEMS Microbiology Letters, 295 (2) pp. 251-260. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_40D26A93BBA2]
 
Novel use of a whole cell E. coli bioreporter as a urinary exposure biomarker.
Ewis C.L., Beggah S., Pook C., Guitart C., Redshaw C., van der Meer J.R., Readman J.W., Galloway T., 2009. Environmental Science and Technology, 43 (2) pp. 423-428. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F6C5CA5221DE]
 
Occurrence and molecular diversity of the Fit insect toxin locus in plant-beneficial pseudomonads
Ruffner B., Péchy-Tarr M., Keel C., Maurhofer M., 2009. IOBC/WPRS Bulletin, 45 pp. 251-254.
[serval:BIB_8ABE4E7E6208]
 
Optimization of preservation conditions of As (III) bioreporter bacteria.
Kuppardt A., Chatzinotas A., Breuer U., van der Meer J.R., Harms H., 2009. Applied microbiology and biotechnology, 82 (4) pp. 785-792. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A61913A483DC]
Patients at risk of complications of Staphylococcus aureus bloodstream infection.
del Rio A., Cervera C., Moreno A., Moreillon P., Miró J.M., 2009. Clinical Infectious Diseases, 48 Suppl 4 pp. S246-S253.
[URN][DOI][WoS][Pmid][serval:BIB_F2C1CC892374]
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