Department of Fundamental Microbiology

Publications | Phd and Masters theses

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1117 publications

... | 2009 | 2008 | 2007 | 2006 | 2005 | 2004 | 2003 | 2002 | ...
2009
 
Optimization of preservation conditions of As (III) bioreporter bacteria.
Kuppardt A., Chatzinotas A., Breuer U., van der Meer J.R., Harms H., 2009. Applied microbiology and biotechnology, 82 (4) pp. 785-792. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_A61913A483DC]
Patients at risk of complications of Staphylococcus aureus bloodstream infection.
del Rio A., Cervera C., Moreno A., Moreillon P., Miró J.M., 2009. Clinical Infectious Diseases, 48 Suppl 4 pp. S246-S253.
[URN][DOI][WoS][Pmid][serval:BIB_F2C1CC892374]
 
Predators promote defence of rhizosphere bacterial populations by selective feeding on non-toxic cheaters.
Jousset A., Rochat L., Péchy-Tarr M., Keel C., Scheu S., Bonkowski M., 2009. The ISME Journal, 3 (6) pp. 666-674. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_0CCE9B3F3600]
 
Regulation of the expression of Fit insect toxin locus genes in the root-associated biocontrol pseudomonad CHA0
Péchy-Tarr M., Binggeli O., Maurhofer M., Keel C., 2009. IOBC/WPRS Bulletin, 45 pp. 243-247.
[serval:BIB_76608A6B9CCE]
 
Regulation of the Fit locus encoding a novel insect toxin in the root-associated Pseudomonas fluorescens biocontrol agent CHA0
Péchy-Tarr M, Maurhofer M., Keel C., 2009., IOBC/WPRS p. 171 dans Elad Y. (eds.) IOBC/WPRS Bulletin.
[serval:BIB_4A4E177112B3]
 
Role of gluconic acid production in phosphate solubilisation, biocontrol ability and rhizosphere competence of Pseudomonas fluorescens CHA0
de Werra P., Péchy-Tarr M., Rochat L., Keel C., Maurhofer M., 2009., IOBC/WPRS p. 163 dans Elad Y., Maurhofer M., Keel C., Gessler C., Duffy B. (eds.) IOBC/WPRS Bulletin, IOBC/WPRS.
[serval:BIB_1C0BE7F0AC06]
 
Role of gluconic acid production in the regulation of biocontrol traits of Pseudomonas fluorescens CHA0.
de Werra P., Péchy-Tarr M., Keel C., Maurhofer M., 2009. Applied and Environmental Microbiology, 75 (12) pp. 4162-4174. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9F51EE8646A8]
 
Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosa.
Sonnleitner E., Abdou L., Haas D., 2009. Proceedings of the National Academy of Sciences of the United States of America, 106 (51) pp. 21866-21871. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8400212CC6CD]
 
Small RNA-dependent expression of secondary metabolism is controlled by Krebs cycle function in Pseudomonas fluorescens.
Takeuchi K., Kiefer P., Reimmann C., Keel C., Dubuis C., Rolli J., Vorholt J.A., Haas D., 2009. The Journal of biological chemistry, 284 (50) pp. 34976-34985. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_C160C88B2980]
 
Staphylococcus aureus clfB and spa alleles of the repeat regions are segregated into major phylogenetic lineages.
Basset P., Hammer N.B., Kuhn G., Vogel V., Sakwinska O., Blanc D.S., 2009. Infection, genetics and evolution, 9 (5) pp. 941-947.
[DOI][WoS][Pmid][serval:BIB_8A35A6797D66]
 
Stereospecificity of the siderophore pyochelin outer membrane transporters in fluorescent pseudomonads.
Hoegy F., Lee X., Noel S., Rognan D., Mislin G.L., Reimmann C., Schalk I.J., 2009. Journal of Biological Chemistry, 284 (22) pp. 14949-14957. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_83755AB8C4B4]
 
Temperature-responsive sensing regulates biocontrol factor expression in Pseudomonas fluorescens CHA0.
Humair B., González N., Mossialos D., Reimmann C., Haas D., 2009. The ISME Journal, 3 (8) pp. 955-965. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_B99261C67093]
 
Tigecycline in combination with other antimicrobials: a review of in vitro, animal and case report studies.
Entenza J.M., Moreillon P., 2009. International Journal of Antimicrobial Agents, 34 (1) pp. 8.e1-8.e9.
[DOI][WoS][Pmid][serval:BIB_62B7860A6481]
 
Tissue microarray and immunohistochemistry as tools for evaluation of antibodies against Chlamydia-like bacteria.
Borel N., Casson N., Entenza J.M., Kaiser C., Pospischil A., Greub G., 2009. Journal of Medical Microbiology, 58 (Pt 7) pp. 863-866. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_4786F08C095F]
 
Toxicity of triclosan, penconazole and metalaxyl on Caulobacter crescentus and a freshwater microbial community as assessed by flow cytometry.
Johnson D.R., Czechowska K., Chèvre N., van der Meer J.R., 2009. Environmental Microbiology, 11 pp. 1682-1691. Peer-reviewed.
[DOI][WoS][serval:BIB_F3E7DD936B0A]
 
Transmission of MRSA and MSSA between humans and farm animals
Sakwinska Olga, Oppliger Anne, Giddey Marlyse, Moreillon Martine, Waldvogel Andreas, Moreillon Philippe, 2009. pp. P050, 110 dans Microbes rule the world : 68th Annual Assembly of the SSM, Amphipôle, University of Lausanne, 4-5 June, 2009, Swiss Society for Microbiology.
[serval:BIB_F6B278EFF3DF]
 
Unlike PAHs from Exxon Valdez crude oil, PAHs from Gulf of Alaska coals are not readily bioavailable.
Deepthike H.U., Tecon R., Van Kooten G., Van der Meer J.R., Harms H., Wells M., Short J., 2009. Environmental Science and Technology, 43 (15) pp. 5864-5870. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_E391322CF69A]
 
Use of an in-house approach to study the three-dimensional structures of various outer membrane proteins: structure of the alcaligin outer membrane transporter FauA from Bordetella pertussis.
Brillet K., Meksem A., Lauber E., Reimmann C., Cobessi D., 2009. Acta Crystallographica. Section D, Biological Crystallography, 65 (Pt 4) pp. 326-331. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_5869DA0DD92E]
 
Use of DGGE analysis to study the impact of genetically modified wheat on the genetic diversity of root-colonizing pseudomonads associated with soil fertility
Meyer J., Keel C., Maurhofer M., 2009., IOBC/WPRS p. 370 dans Elad Y., Maurhofer M., Keel C., Gessler C., Duffy B. (eds.) IOBC/WPRS Bulletin, IOBC/WPRS.
[serval:BIB_7F56CF140FBF]
2008
 
Seasonal fluctuations of bacterial community diversity in agricultural soil and experimental validation by laboratory disturbance experiments.
Meier C., Wehrli B., van der Meer J.R., 2008/08. Microbial ecology, 56 (2) pp. 210-222. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_44B11AA49069]
 
Adaptation of aerobically growing Pseudomonas aeruginosa to copper starvation.
Frangipani E., Slaveykova V.I., Reimmann C., Haas D., 2008. Journal of bacteriology, 190 (20) pp. 6706-6717. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_D595708C2091]
 
ANIBAL, stable isotope-based quantitative proteomics by aniline and benzoic acid labeling of amino and carboxylic groups
Panchaud A., Hansson J., Affolter M., Bel R. R., Piu S., Moreillon P., Kussmann M., 2008. Molecular and Cellular Proteomics, 7 (4) pp. 800-812. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_9FD9A1A35BF0]
Bacterial biosensors for measuring availability of environmental pollutants
Tecon R., van der Meer J. R., 2008. Sensors, 8 (7) pp. 4062-4080. Peer-reviewed.
[URN][DOI][WoS][serval:BIB_3926B9861EA9]
 
Biosafety assessment of probiotics used for human consumption: recommendations from the EU-PROSAFE project
Vankerckhoven V., Huys G., Vancanneyt M., Vael C., Klare I., Romond M.B., Entenza J.M., Moreillon P., Wind R.D., Knol J. et al., 2008. Trends in Food Science and Technology, 19 (2) pp. 102-114. Peer-reviewed.
[DOI][WoS][serval:BIB_B51301615A0E]
 
Burkholderia sartisoli sp. nov., isolated from a polycyclic aromatic hydrocarbon-contaminated soil.
Vanlaere E., van der Meer J.R., Falsen E., Salles J.F., de Brandt E., Vandamme P., 2008. International Journal of Systematic and Evolutionary Microbiology, 58 (Pt 2) pp. 420-423.
[DOI][WoS][Pmid][serval:BIB_0F4DE4659FCC]
Comparison of naphthalene bioavailability determined by whole-cell biosensing and availability determined by extraction with Tenax
Kohlmeier S., Mancuso M., Deepthike U., Tecon R., van der Meer J.R., Harms H., Wells M., 2008. Environmental Pollution, 156 (3) pp. 803-808. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_EFB2D1AC4E95]
 
Current features of infective endocarditis in elderly patients: results of the International Collaboration on Endocarditis Prospective Cohort Study.
Durante-Mangoni E., Bradley S., Selton-Suty C., Tripodi M.F., Barsic B., Bouza E., Cabell C.H., Ramos A.I., Fowler V., Hoen B. et al., 2008. Archives of Internal Medicine, 168 (19) pp. 2095-2103.
[DOI][WoS][Pmid][serval:BIB_CCDB99BBDE1D]
 
Detection of plant-modulated alterations in antifungal gene expression in Pseudomonas fluorescens CHA0 on roots by flow cytometry.
de Werra P., Baehler E., Huser A., Keel C., Maurhofer M., 2008. Applied and Environmental Microbiology, 74 (5) pp. 1339-1349.
[DOI][WoS][Pmid][serval:BIB_C150B7680037]
 
Development of glycopeptide-intermediate resistance by Staphylococcus aureus leads to attenuated infectivity in a rat model of endocarditis.
Majcherczyk P.A., Barblan J.L., Moreillon P., Entenza J.M., 2008. Microbial pathogenesis, 45 (5-6) pp. 408-414. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_1E16B1C38CC4]
 
Emergence of secretion-defective sublines of Pseudomonas aeruginosa PAO1 resulting from spontaneous mutations in the vfr global regulatory gene.
Fox A., Haas D., Reimmann C., Heeb S., Filloux A., Voulhoux R., 2008. Applied and environmental microbiology, 74 (6) pp. 1902-1908. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_8D930F7D7E58]
 
Enhanced biodegradation of hexachlorocyclohexane (HCH) in contaminated soils via inoculation with Sphingobium indicum B90A.
Raina V., Suar M., Singh A., Prakash O., Dadhwal M., Gupta S.K., Dogra C., Lawlor K., Lal S., van der Meer J.R. et al., 2008. Biodegradation, 19 (1) pp. 27-40.
[DOI][WoS][Pmid][serval:BIB_BF67FF08B7E7]
 
Experimental and computational approaches to quantitative proteomics: status quo and outlook.
Panchaud A., Affolter M., Moreillon P., Kussmann M., 2008. Journal of Proteomics, 71 (1) pp. 19-33.
[DOI][WoS][Pmid][serval:BIB_699FD94D1B7A]
 
Fitness cost and impaired survival in penicillin-resistant Streptococcus gordonii isolates selected in the laboratory.
Haenni M., Moreillon P., 2008. Antimicrobial Agents and Chemotherapy, 52 (1) pp. 337-339.
[DOI][WoS][Pmid][serval:BIB_E2D1A8A9A1D3]
 
Gac/Rsm signal transduction pathway of gamma-proteobacteria: from RNA recognition to regulation of social behaviour.
Lapouge K., Schubert M., Allain F.H., Haas D., 2008. Molecular Microbiology, 67 (2) pp. 241-253.
[DOI][WoS][Pmid][serval:BIB_5012D3321796]
Genome-wide search reveals a novel GacA-regulated small RNA in Pseudomonas species.
González N., Heeb S., Valverde C., Kay E., Reimmann C., Junier T., Haas D., 2008. BMC genomics, 9 p. 167. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_B3ADE80624C0]
 
Genomic analysis of secondary metabolite production by Pseudomonas fluorescens Pf-5
Loper J. E., Bruck D., Péchy-Tarr M., Maurhofer M., Keel C., Gross H., 2008. pp. 1-6 dans Lorito M., Woo S., Scala S. (eds.) Biology of Molecular Plant-Microbe Interactions, APS Press.
[serval:BIB_9AF34B834B62]
Genomic islands: tools of bacterial horizontal gene transfer and evolution.
Juhas M., van der Meer J.R., Gaillard M., Harding R.M., Hood D.W., Crook D.W., 2008. FEMS Microbiology Reviews, 33 (2) pp. 376-393. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_E141F168AF54]
 
Genomics of secondary metabolite production by Pseudomonas fluorescens Pf-5
Loper J.E., Paulsen I., Bruck D., Péchy-Tarr M., Maurhofer M., Keel C., Gross H., 2008. pp. S94 dans 100th Annual Meeting of the American-Phytopathological-Society Minneapolis, MN, JUL 26-30, 2008, Phytopathology. Peer-reviewed, American Phytopathological Society.
[WoS][serval:BIB_7699009D51E9]
 
Host and invader impact of transfer of the clc genomic island into Pseudomonas aeruginosa PAO1
Gaillard M., Pernet N., Vogne C., Hagenbuchle O., van der Meer J. R., 2008. Proceedings of the National Academy of Sciences of the United States of America, 105 (19) pp. 7058-7063. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_341690BB4E4B]
In vitro activities of tigecycline combined with other antimicrobials against multiresistant gram-positive and gram-negative pathogens.
Vouillamoz J., Moreillon P., Giddey M., Entenza J.M., 2008. Journal of Antimicrobial Chemotherapy, 61 (2) pp. 371-374.
[URN][DOI][WoS][Pmid][serval:BIB_E2B8E718B1BF]
 
Insecticidal activity found in plant-beneficial Pseudomonas and in Photorhabdus/Xenorhabdus
Grunder J., Fischer E., Péchy-Tarr M., Maurhofer M., Keel C., 2008., Proceedings of the Meeting at Alés (France), 3-7 June, 2007 p. 106 dans Ehlers R.U., Enkerli J., Glazer I., López-Ferber M., Tkaczuk C. (eds.) IOBC/WPRS Bulletins Working Group "Insect Pathogens and Insect Parasitic Nematodes", IOBC/WPRS.
[serval:BIB_CB4030437C2E]
Internal arsenite bioassay calibration using multiple reporter cell lines
Wackwitz A., Harms H., Chatzinotas A., Breuer U., Vogne C., van der Meer J. R., 2008. Microbial Biotechnology, 1 (2) pp. 149-157. Peer-reviewed.
[URN][DOI][WoS][serval:BIB_D3D7C035CF00]
 
Molecular analysis of a novel gene cluster encoding an insect toxin in plant-associated strains of Pseudomonas fluorescens
Pechy-Tarr M., Bruck D. J., Maurhofer M., Fischer E., Vogne C., Henkels M. D., Donahue K. M., Grunder J., Loper J. E., Keel C., 2008. Environmental Microbiology, 10 (9) pp. 2368-2386. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_F9DEFBD20F73]
 
Murine model of pneumonia caused by Parachlamydia acanthamoebae
Casson N., Entenza J.M., Borel N., Pospischil A., Greub G., 2008. Microbial Pathogenesis, 45 (2) pp. 92-97. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_EEC22F7DD2DF]
Mutant HbpR transcription activator isolation for 2-chlorobiphenyl via green fluorescent protein-based flow cytometry and cell sorting.
Beggah S., Vogne C., Zenaro E., Van Der Meer J.R., 2008. Microbial Biotechnology, 1 (1) pp. 68-78.
[URN][DOI][WoS][Pmid][serval:BIB_808BE6B1F75F]
 
New and emerging treatment of Staphylococcus aureus infections in the hospital setting.
Moreillon P., 2008. Clinical Microbiology and Infection, 14 (Suppl. 3) pp. 32-41. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_15038808527B]
 
Phenotypic Variation and Bistable Switching in Bacteria
Smits Wiep Klaas, Veening Jan-Willem, Kuipers Oscar, 2008..
[DOI][serval:BIB_2337C09E7CAE]
 
Plant-beneficial pseudomonad with insecticidal activity
Péchy-Tarr M., Fischer E., Maurhofer M., Grunder J., Keel C., 2008., Proceedings of the Meeting at Alés (France), 3-7 June, 2007 p. 105 dans Ehlers R.U., Enkerli J., Glazer I., López-Ferber M., Tkaczuk C. (eds.) IOBC/WPRS Bulletins Working Group "Insect Pathogens and Insect Parasitic Nematodes", IOBC/WPRS.
[serval:BIB_8CA3632670A1]
 
Pseudomonas aeruginosa virulence genes identified in a Dictyostelium host model.
Alibaud L., Köhler T., Coudray A., Prigent-Combaret C., Bergeret E., Perrin J., Benghezal M., Reimmann C., Gauthier Y., van Delden C. et al., 2008. Cellular Microbiology, 10 (3) pp. 729-740.
[DOI][WoS][Pmid][serval:BIB_416DCA6C7AC6]
 
Quorum sensing regulation in the biocontrol strain Pseudomonas fluorescens CHA0
Lapouge K., Dubuis C., Haas D., 2008., 13th International Congress on Molecular Plant-Microbe Interactions p. 6 dans Lorito M., Woo S.L., Scala F. (eds.) Biology of Plant-Microbe Interactions, International Society for Molecular Plant-Microbe Interactions.
[serval:BIB_68D4401DE3ED]
 
Small RNAs controlled by two-component systems.
Valverde C., Haas D., 2008. Advances in experimental medicine and biology, 631 pp. 54-79. Peer-reviewed.
[WoS][Pmid][serval:BIB_BCB031DF3B80]
Stochasticity and bistability in horizontal transfer control of a genomic island in Pseudomonas.
Minoia M., Gaillard M., Reinhard F., Stojanov M., Sentchilo V., van der Meer J.R., 2008. Proceedings of the National Academy of Sciences of the United States of America, 105 (52) pp. 20792-20797. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_FA49C421D122]
 
The fibrinogen- and fibronectin-binding domains of Staphylococcus aureus fibronectin-binding protein A synergistically promote endothelial invasion and experimental endocarditis.
Piroth L., Que Y.A., Widmer E., Panchaud A., Piu S., Entenza J.M., Moreillon P., 2008. Infection and Immunity, 76 (8) pp. 3824-3831.
[DOI][WoS][Pmid][serval:BIB_A1DA139E02C2]
 
Use of flow cytometric methods for single-cell analysis in environmental microbiology
Czechowska K., Johnson D. R., van der Meer J. R., 2008. Current Opinion in Microbiology, 11 (3) pp. 205-212. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_6FF19A356C09]
2007
 
A genomic view on the evolution of catabolic pathways and bacterial adaptation to toxic compounds
Van Der Meer J. R., 2007. pp. 219-269 dans Diaz E. (eds.) Microbial biodegradation : genomics and molecular biology chap. 8, Caister Academic Press.
[serval:BIB_8C4BDA0BC7CC]
 
A guide to small RNAs in microorganisms
Storz G., Haas D., 2007. Current Opinion in Microbiology, 10 (2) pp. 93-95.
[DOI][WoS][serval:BIB_EA212580D398]
Analyses of six homologous proteins of Protochlamydia amoebophila UWE25 encoded by large GC-rich genes (lgr): a model of evolution and concatenation of leucine-rich repeats.
Eugster M., Roten C.A., Greub G., 2007. BMC evolutionary biology, 7 p. 231.
[URN][DOI][WoS][Pmid][serval:BIB_84285CD4D328]
 
Analysis of bioavailable arsenic in rice with whole cell living bioreporter bacteria.
Baumann B., van der Meer J.R., 2007. Journal of Agricultural and Food Chemistry, 55 (6) pp. 2115-2120.
[DOI][WoS][Pmid][serval:BIB_B1F89D158CEE]
 
Artificial neural network study of whole-cell bacterial bioreporter response determined using fluorescence flow cytometry.
Busam S., McNabb M., Wackwitz A., Senevirathna W., Beggah S., Meer J.R., Wells M., Breuer U., Harms H., 2007. Analytical Chemistry, 79 (23) pp. 9107-9114.
[DOI][WoS][Pmid][serval:BIB_37B3BDC1EC23]
 
Bioreporters: gfp versus lux revisited and single-cell response.
Kohlmeier S., Mancuso M., Tecon R., Harms H., van der Meer J.R., Wells M., 2007. Biosensors and Bioelectronics, 22 (8) pp. 1578-1585.
[DOI][WoS][Pmid][serval:BIB_5FD7B1735A6E]
 
Canine distemper virus infection of primary hippocampal cells induces increase in extracellular glutamate and neurodegeneration.
Brunner J.M., Plattet P., Majcherczyk P., Zurbriggen A., Wittek R., Hirling H., 2007. Journal of Neurochemistry, 103 (3) pp. 1184-1195.
[DOI][WoS][Pmid][serval:BIB_5EBBD58F029D]
 
Cross-species GacA-controlled induction of antibiosis in pseudomonads.
Dubuis C., Haas D., 2007. Applied and Environmental Microbiology, 73 (2) pp. 650-654.
[DOI][WoS][Pmid][serval:BIB_738D91AC49B9]
Dialogues of root-colonizing biocontrol pseudomonads
Dubuis C., Keel C., Haas D., 2007. European Journal of Plant Pathology, 119 (3) pp. 311-328. Peer-reviewed.
[URN][DOI][WoS][serval:BIB_4CAA1824972E]
 
Effects of alpha-phosphoglucomutase deficiency on cell wall properties and fitness in Streptococcus gordonii.
Bizzini A., Majcherczyk P., Beggah-Möller S., Soldo B., Entenza J.M., Gaillard M., Moreillon P., Lazarevic V., 2007. Microbiology, 153 (Pt 2) pp. 490-498.
[DOI][WoS][Pmid][serval:BIB_530C3E6CA1C0]
 
Ferripyochelin uptake genes are involved in pyochelin-mediated signalling in Pseudomonas aeruginosa.
Michel L., Bachelard A., Reimmann C., 2007. Microbiology, 153 (Pt 5) pp. 1508-1518.
[DOI][WoS][Pmid][serval:BIB_69B2A223B76D]
 
Fibronectin-binding proteins and clumping factor A in Staphylococcus aureus experimental endocarditis: FnBPA is sufficient to activate human endothelial cells.
Heying R., van de Gevel J., Que Y.A., Moreillon P., Beekhuizen H., 2007. Thrombosis and haemostasis, 97 (4) pp. 617-26. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_97BE4C111176]
 
Genetic removal of tri-unsaturated fatty acids suppresses developmental and molecular phenotypes of an Arabidopsis tocopherol-deficient mutant. Whole-body mapping of malondialdehyde pools in a complex eukaryote.
Mène-Saffrané L., Davoine C., Stolz S., Majcherczyk P., Farmer E.E., 2007. Journal of Biological Chemistry, 282 (49) pp. 35749-35756.
[DOI][WoS][Pmid][serval:BIB_A5E5BE3DCA8B]
 
Infectivity of Lactobacillus rhamnosus and Lactobacillus paracasei isolates in a rat model of experimental endocarditis.
Vankerckhoven V., Moreillon P., Piu S., Giddey M., Huys G., Vancanneyt M., Goossens H., Entenza J.M., 2007. Journal of Medical Microbiology, 56 (8) pp. 1017-1024.
[DOI][WoS][Pmid][serval:BIB_EF7D06517DE2]
 
Interplanetary transfer of photosynthesis: an experimental demonstration of a selective dispersal filter in planetary island biogeography.
Cockell C.S., Brack A., Wynn-Williams D.D., Baglioni P., Brandstätter F., Demets R., Edwards H.G., Gronstal A.L., Kurat G., Lee P. et al., 2007. Astrobiology, 7 (1) pp. 1-9.
[DOI][WoS][Pmid][serval:BIB_AFDF904DF6BF]
 
Is the ability of biocontrol fluorescent pseudomonads to produce the antifungal metabolite 2,4-diacetylphloroglucinol really synonymous with higher plant protection?
Rezzonico F., Zala M., Keel C., Duffy B., Moënne-Loccoz Y., Défago G., 2007. New Phytologist, 173 (4) pp. 861-872.
[DOI][WoS][Pmid][serval:BIB_3BE24A0986E5]
Living with an imperfect cell wall: compensation of femAB inactivation in Staphylococcus aureus.
Hübscher J., Jansen A., Kotte O., Schäfer J., Majcherczyk P.A., Harris L.G., Bierbaum G., Heinemann M., Berger-Bächi B., 2007. BMC Genomics, 8 p. 307.
[URN][DOI][WoS][Pmid][serval:BIB_E88D083EA7B3]
Loss of penicillin tolerance by inactivating the carbon catabolite repression determinant CcpA in Streptococcus gordonii.
Bizzini A., Entenza J.M., Moreillon P., 2007. Journal of Antimicrobial Chemotherapy, 59 (4) pp. 607-615.
[URN][DOI][WoS][Pmid][serval:BIB_E1B1A5F34679]
 
Mass spectrometry as a rapid and powerful alternative to antibodies for detecting LPXTG wall-associated proteins of Staphylococcus aureus
Panchaud A., Widmer E., Kussmann M., Moreillon P., Affolter M., 2007. International Journal of Mass Spectrometry, 268 (2-3) pp. 234-243. Peer-reviewed.
[DOI][WoS][serval:BIB_09FCB6407A5F]
 
Mechanism of hcnA mRNA recognition in the Gac/Rsm signal transduction pathway of Pseudomonas fluorescens.
Lapouge K., Sineva E., Lindell M., Starke K., Baker C.S., Babitzke P., Haas D., 2007. Molecular Microbiology, 66 (2) pp. 341-356.
[DOI][WoS][Pmid][serval:BIB_E3BC448A3538]
 
Molecular basis of messenger RNA recognition by the specific bacterial repressing clamp RsmA/CsrA.
Schubert M., Lapouge K., Duss O., Oberstrass F.C., Jelesarov I., Haas D., Allain F.H., 2007. Nature Structural and Molecular Biology, 14 (9) pp. 807-813.
[DOI][WoS][Pmid][serval:BIB_BB2DA4B9560E]
 
Promoter and transcription analysis of penicillin-binding protein genes in Streptococcus gordonii.
Haenni M., Moreillon P., Lazarevic V., 2007. Antimicrobial Agents and Chemotherapy, 51 (8) pp. 2774-2783.
[DOI][WoS][Pmid][serval:BIB_279AD1907AB5]
 
Pseudomonas fluorescens CHA0 produces enantio-pyochelin, the optical antipode of the Pseudomonas aeruginosa siderophore pyochelin.
Youard Z.A., Mislin G.L., Majcherczyk P.A., Schalk I.J., Reimmann C., 2007. Journal of Biological Chemistry, 282 (49) pp. 35546-35553.
[DOI][WoS][Pmid][serval:BIB_830BA486FC8B]
 
Serological cross-reactivity between different Chlamydia-like organisms.
Casson N., Entenza J.M., Greub G., 2007. Journal of Clinical Microbiology, 45 (1) pp. 234-236.
[DOI][WoS][Pmid][serval:BIB_2BA4333B257E]
 
Single-dose oral amoxicillin or linezolid for prophylaxis of experimental endocarditis due to vancomycin-susceptible and vancomycin-resistant Enterococcus faecalis.
Moreillon P., Wilson W.R., Leclercq R., Entenza J.M., 2007. Antimicrobial Agents and Chemotherapy, 51 (5) pp. 1661-1665.
[DOI][WoS][Pmid][serval:BIB_5CEECF3D08AE]
Solving ambiguities in contig assembly of Idiomarina loihiensis L2TR chromosome by in silico analyses.
Collyn F., Roten C.A., Guy L., 2007. FEMS Microbiology Letters, 271 (2) pp. 187-192.
[URN][DOI][WoS][Pmid][serval:BIB_84FABFF05093]
 
Variability of voriconazole plasma levels measured by new high-performance liquid chromatography and bioassay methods.
Pascual A., Nieth V., Calandra T., Bille J., Bolay S., Decosterd L.A., Buclin T., Majcherczyk P.A., Sanglard D., Marchetti O., 2007. Antimicrobial Agents and Chemotherapy, 51 (1) pp. 137-143.
[DOI][WoS][Pmid][serval:BIB_62560DA1D073]
 
Wet chemical silver treatment of endotracheal tubes to produce antibacterial surfaces.
Ramstedt M., Houriet R., Mossialos D., Haas D., Mathieu H.J., 2007. Journal of Biomedical Materials Research. Part B, Applied Biomaterials, 83 (1) pp. 169-180.
[DOI][WoS][Pmid][serval:BIB_31321E7BEA1E]
2006
 
A new green fluorescent protein-based bacterial biosensor for analysing phenanthrene fluxes.
Tecon R., Wells M., van der Meer J.R., 2006. Environmental Microbiology, 8 (4) pp. 697-708.
[DOI][WoS][Pmid][serval:BIB_D451BC2BE0DA]
 
Adherence of Abiotrophia defectiva and Granulicatella species to fibronectin: is there a link with endovascular infections?
Senn L., Entenza J.M., Prod'hom G., 2006. FEMS Immunology and Medical Microbiology, 48 (2) pp. 215-217.
[DOI][WoS][Pmid][serval:BIB_34ABC929CBCF]
 
Analytics with engineered bacterial bioreporter strains and systems.
van der Meer J.R., 2006. Current Opinion in Biotechnology, 17 (1) pp. 1-3.
[DOI][WoS][Pmid][serval:BIB_1BB0FFCBF4BB]
Bacterial community structure of a pesticide-contaminated site and assessment of changes induced in community structure during bioremediation.
Paul D., Pandey G., Meier C., van der Meer J.R., Jain R.K., 2006. Fems Microbiology Ecology, 57 (1) pp. 116-127.
[URN][DOI][WoS][Pmid][serval:BIB_0A14F850ECDE]
Bloodstream and endovascular infections due to Abiotrophia defectiva and Granulicatella species.
Senn L., Entenza J.M., Greub G., Jaton K., Wenger A., Bille J., Calandra T., Prod'hom G., 2006. BMC Infectious Diseases, 6 (9) pp. 1-6.
[URN][DOI][WoS][Pmid][serval:BIB_60E04201075E]
 
Characterization of PhlG, a hydrolase that specifically degrades the antifungal compound 2,4-diacetylphloroglucinol in the biocontrol agent Pseudomonas fluorescens CHA0.
Bottiglieri M., Keel C., 2006. Applied and Environmental Microbiology, 72 (1) pp. 418-427.
[DOI][WoS][Pmid][serval:BIB_B67C7A8A7E02]
 
Combining protein identification and quantification: C-terminal isotope-coded tagging using sulfanilic acid.
Panchaud A., Guillaume E., Affolter M., Robert F., Moreillon P., Kussmann M., 2006. Rapid Communications in Mass Spectrometry, 20 (10) pp. 1585-1594.
[DOI][WoS][Pmid][serval:BIB_AB6E02BA9E5A]
 
Cost of cell-cell signalling in Pseudomonas aeruginosa: why it can pay to be signal-blind.
Haas D., 2006. Nature Reviews. Microbiology, 4 (7) pp. 562; author reply 562.
[DOI][WoS][Pmid][serval:BIB_25B3DE4A0FA0]
Describing ancient horizontal gene transfers at the nucleotide and gene levels by comparative pathogenicity island genometrics.
Collyn F., Guy L., Marceau M., Simonet M., Roten C.A., 2006. Bioinformatics, 22 (9) pp. 1072-1079.
[URN][DOI][WoS][Pmid][serval:BIB_4CBE419539E7]
 
Detection of live and antibiotic-killed bacteria by quantitative real-time PCR of specific fragments of rRNA.
Aellen S., Que Y.A., Guignard B., Haenni M., Moreillon P., 2006. Antimicrobial Agents and Chemotherapy, 50 (6) pp. 1913-1920.
[DOI][WoS][Pmid][serval:BIB_ADA6EA5A0802]
Efficacy of daptomycin in the treatment of experimental endocarditis due to susceptible and multidrug-resistant enterococci.
Vouillamoz J., Moreillon P., Giddey M., Entenza J.M., 2006. Journal of Antimicrobial Chemotherapy, 58 (6) pp. 1208-1214.
[URN][DOI][WoS][Pmid][serval:BIB_5F515113D09B]
 
Environmental pollution promotes selection of microbial degradation pathways
van der Meer J. R., 2006. Frontiers in Ecology and the Environment, 4 (1) pp. 35-42. Peer-reviewed.
[DOI][WoS][serval:BIB_BCEF0A861551]
 
Evolution of catabolic pathways in Pseudomonas through gene transfer
van der Meer J. R., 2006. pp. 189-236 dans Ramos J. L., Levesque R. C. (eds.) Pseudomonas : Molecular Biology of Emerging Issues, Springer.
[DOI][serval:BIB_8A0F87714F7F]
 
Functional analysis of the post-transcriptional regulator RsmA reveals a novel RNA-binding site.
Heeb S., Kuehne S.A., Bycroft M., Crivii S., Allen M.D., Haas D., Cámara M., Williams P., 2006. Journal of Molecular Biology, 355 (5) pp. 1026-1036.
[DOI][WoS][Pmid][serval:BIB_229218BC873E]
 
Genomic islands and the evolution of catabolic pathways
Lacour S., Gaillard M., Van Der Meer J. R., 2006. pp. 255-274 dans Logan N. A., Lappin-Scott H. M., Oyston P. C. F. (eds.) Prokaryotic diversity : mechanisms and significance, Cambridge University Press.
[serval:BIB_D69651CF1E98]
 
Granular layer in the periplasmic space of gram-positive bacteria and fine structures of Enterococcus gallinarum and Streptococcus gordonii septa revealed by cryo-electron microscopy of vitreous sections.
Zuber B., Haenni M., Ribeiro T., Minnig K., Lopes F., Moreillon P., Dubochet J., 2006. Journal of Bacteriology, 188 (18) pp. 6652-6660.
[DOI][WoS][Pmid][serval:BIB_3D23E178ECA5]
 
Impact of quorum sensing on fitness of Pseudomonas aeruginosa.
Heurlier K., Dénervaud V., Haas D., 2006. International Journal of Medical Microbiology, 296 (2-3) pp. 93-102.
[DOI][WoS][Pmid][serval:BIB_87913346E16C]
 
In vivo survival of teicoplanin-resistant Staphylococcus aureus and fitness cost of teicoplanin resistance.
McCallum N., Karauzum H., Getzmann R., Bischoff M., Majcherczyk P., Berger-Bächi B., Landmann R., 2006. Antimicrobial Agents and Chemotherapy, 50 (7) pp. 2352-2360.
[DOI][WoS][Pmid][serval:BIB_9F50D1810F84]
 
Infective endocarditis in the elderly
Moreillon P., Bizzini A., Que Y. A., 2006. pp. 1749-1762 dans Patty J.M.S., Sinclair A.J., Morley J.E. (eds.) Principles and Practice of Geriatric Medicine chap. 147, John Wiley & Sons.
[serval:BIB_F2C7157F58D8]
 
Information from single-cell bacterial biosensors: what is it good for?
Tecon R., van der Meer J.R., 2006. Current Opinion in Biotechnology, 17 (1) pp. 4-10.
[DOI][WoS][Pmid][serval:BIB_F08162BC7181]
 
L'endocardite en pratique ambulatoire [Infective endocarditis and outpatient practice].
Que Y.A., Moreillon P., Francioli P., 2006. Revue Médicale Suisse, 2 (60) pp. 903-6, 908-11.
[Pmid][serval:BIB_AAFD43902827]
 
Lack of in vitro biofilm formation does not attenuate the virulence of Streptococcus gordonii in experimental endocarditis.
Bizzini A., Beggah-Möller S., Moreillon P., Entenza J.M., 2006. FEMS Immunology and Medical Microbiology, 48 (3) pp. 419-423.
[DOI][WoS][Pmid][serval:BIB_B17260B8FD45]
 
Mutational analysis of class A and class B penicillin-binding proteins in Streptococcus gordonii.
Haenni M., Majcherczyk P.A., Barblan J.L., Moreillon P., 2006. Antimicrobial Agents and Chemotherapy, 50 (12) pp. 4062-4069.
[DOI][WoS][Pmid][serval:BIB_83F9008996AA]
 
Mutations in penicillin-binding protein (PBP) genes and in non-PBP genes during selection of penicillin-resistant Streptococcus gordonii.
Haenni M., Moreillon P., 2006. Antimicrobial Agents and Chemotherapy, 50 (12) pp. 4053-4061.
[DOI][WoS][Pmid][serval:BIB_B0D576EFE70E]
New concepts in the pathophysiology of infective endocarditis.
Widmer E., Que Y.A., Entenza J.M., Moreillon P., 2006. Current Infectious Disease Reports, 8 (4) pp. 271-279.
[URN][DOI][Pmid][serval:BIB_DA4BA27157AE]
 
New insights into the molecular basis of desmoplakin- and desmin-related cardiomyopathies.
Lapouge K., Fontao L., Champliaud M.F., Jaunin F., Frias M.A., Favre B., Paulin D., Green K.J., Borradori L., 2006. Journal of Cell Science, 119 (Pt 23) pp. 4974-4985.
[DOI][WoS][Pmid][serval:BIB_7E51FDCB2766]
 
Prospective determination of plasma imipenem concentrations in critically ill children.
Giannoni E., Moreillon P., Cotting J., Moessinger A., Bille J., Décosterd L., Zanetti G., Majcherczyk P., Bugnon D., 2006. Antimicrobial Agents and Chemotherapy, 50 (7) pp. 2563-2568.
[DOI][WoS][Pmid][serval:BIB_E2F1AB540BD5]
 
Purification and characterization of two enantioselective alpha-ketoglutarate-dependent dioxygenases, RdpA and SdpA, from Sphingomonas herbicidovorans MH.
Müller T.A., Fleischmann T., van der Meer J.R., Kohler H.P., 2006. Applied and Environmental Microbiology, 72 (7) pp. 4853-4861.
[DOI][WoS][Pmid][serval:BIB_4D7377327DE3]
 
Short-term stability of testosterone and epitestosterone conjugates in urine samples: quantification by liquid chromatography-linear ion trap mass spectrometry.
Saudan C., Entenza J.M., Baume N., Mangin P., Saugy M., 2006. Journal of Chromatography. B, Analytical Technologies In the Biomedical and Life Sciences, 844 (1) pp. 168-174.
[DOI][WoS][Pmid][serval:BIB_E03E9E4FCE27]
 
Small RNAs in bacterialcell-cell communication
Kay E., Reimmann C., Haas D., 2006. Microbe, 1 (2) pp. 63-69.
[serval:BIB_7523D5190528]
 
The clc element of Pseudomonas sp. strain B13, a genomic island with various catabolic properties.
Gaillard M., Vallaeys T., Vorhölter F.J., Minoia M., Werlen C., Sentchilo V., Pühler A., van der Meer J.R., 2006. Journal of Bacteriology, 188 (5) pp. 1999-2013.
[DOI][WoS][Pmid][serval:BIB_D5BE93CEBFEA]
The discriminatory power of MALDI-TOF mass spectrometry to differentiate between isogenic teicoplanin-susceptible and teicoplanin-resistant strains of methicillin-resistant Staphylococcus aureus.
Majcherczyk P.A., McKenna T., Moreillon P., Vaudaux P., 2006. FEMS Microbiology Letters, 255 (2) pp. 233-239.
[URN][DOI][WoS][Pmid][serval:BIB_7D4D66D49213]
 
Thiamine-auxotrophic mutants of Pseudomonas fluorescens CHA0 are defective in cell-cell signaling and biocontrol factor expression.
Dubuis C., Rolli J., Lutz M., Défago G., Haas D., 2006. Applied and Environmental Microbiology, 72 (4) pp. 2606-2613.
[DOI][WoS][Pmid][serval:BIB_80D86A8A8A92]
 
Transcriptomic and functional analysis of an autolysis-deficient, teicoplanin-resistant derivative of methicillin-resistant Staphylococcus aureus.
Renzoni A., Barras C., François P., Charbonnier Y., Huggler E., Garzoni C., Kelley W.L., Majcherczyk P., Schrenzel J., Lew D.P. et al., 2006. Antimicrobial Agents and Chemotherapy, 50 (9) pp. 3048-3061.
[DOI][WoS][Pmid][serval:BIB_0BC508F2B8D4]
 
Two GacA-dependent small RNAs modulate the quorum-sensing response in Pseudomonas aeruginosa.
Kay E., Humair B., Dénervaud V., Riedel K., Spahr S., Eberl L., Valverde C., Haas D., 2006. Journal of Bacteriology, 188 (16) pp. 6026-6033.
[DOI][WoS][Pmid][serval:BIB_895393052B07]
 
Two novel MvaT-like global regulators control exoproduct formation and biocontrol activity in root-associated Pseudomonas fluorescens CHA0.
Baehler E., de Werra P., Wick L.Y., Péchy-Tarr M., Mathys S., Maurhofer M., Keel C., 2006. Molecular Plant-Microbe Interactions, 19 (3) pp. 313-329.
[DOI][WoS][Pmid][serval:BIB_E560BA06E659]
 
Using flow cytometry for in situ monitoring of antimicrobial compound production in the biocontrol bacterium Pseudomonas fluorescens CHA0
de Werra P., Huser A., Baehler E., Keel C., Maurhofer M., 2006. pp. 117-121 dans Raaijmakers J.M., Sikora R.A. (eds.) IOBC/WPRS Bulletin, IOBC/WPRS Bulletin.
[serval:BIB_A840FFEBF409]
 
Whole-cell living biosensors--are they ready for environmental application?
Harms H., Wells M.C., van der Meer J.R., 2006. Applied Microbiology and Biotechnology, 70 (3) pp. 273-280.
[DOI][WoS][Pmid][serval:BIB_C07260FF8F30]
2005
 
Analysis of teichoic acid biosynthesis regulation reveals that the extracytoplasmic function sigma factor sigmaM is induced by phosphate depletion in Bacillus subtilis W23.
Minnig K., Lazarevic V., Soldo B., Mauël C., 2005. Microbiology, 151 (Pt 9) pp. 3041-3049.
[DOI][WoS][Pmid][serval:BIB_37326]
 
Bacillus subtilis alpha-phosphoglucomutase is required for normal cell morphology and biofilm formation.
Lazarevic V., Soldo B., Médico N., Pooley H., Bron S., Karamata D., 2005. Applied and Environmental Microbiology, 71 (1) pp. 39-45.
[DOI][WoS][Pmid][serval:BIB_37324]
 
Bacterial bioassay for rapid and accurate analysis of arsenic in highly variable groundwater samples.
Trang P.T., Berg M., Viet P.H., Van Mui N., Van Der Meer J.R., 2005. Environmental Science and Technology, 39 (19) pp. 7625-7630.
[DOI][WoS][Pmid][serval:BIB_A5BDB7442000]
 
Beta-lactams against methicillin-resistant Staphylococcus aureus.
Guignard B., Entenza J.M., Moreillon P., 2005. Current Opinion in Pharmacology, 5 (5) pp. 479-489.
[DOI][WoS][Pmid][serval:BIB_CDD42C73A259]
 
Biocontrol genome deciphered.
Haas D., 2005. Nature Biotechnology, 23 (7) pp. 823-824.
[DOI][WoS][Pmid][serval:BIB_325F3AE39F7F]
 
Biological control of soil-borne pathogens by fluorescent pseudomonads.
Haas D., Défago G., 2005. Nature Reviews. Microbiology, 3 (4) pp. 307-319.
[DOI][WoS][Pmid][serval:BIB_8E20680435DA]
 
Characterization of HbpR binding by site-directed mutagenesis of its DNA-binding site and by deletion of the effector domain.
Tropel D., van der Meer J.R., 2005. FEBS Journal, 272 (7) pp. 1756-1766.
[DOI][WoS][Pmid][serval:BIB_D3E453C01AFA]
 
Comparative analysis of the roles of HtrA-like surface proteases in two virulent Staphylococcus aureus strains.
Rigoulay C., Entenza J.M., Halpern D., Widmer E., Moreillon P., Poquet I., Gruss A., 2005. Infection and Immunity, 73 (1) pp. 563-572.
[DOI][WoS][Pmid][serval:BIB_5157EE4B83BD]
 
Effect of groundwater composition on arsenic detection by bacterial biosensors.
Harms H., Rime J., Hug S.J., van der Meer J.R., 2005. Microchimica Acta, 151 (3-4) pp. 217-222. Peer-reviewed.
[DOI][WoS][serval:BIB_37367]
 
Enantioselective transformation of alpha-hexachlorocyclohexane by the dehydrochlorinases LinA1 and LinA2 from the soil bacterium Sphingomonas paucimobilis B90A.
Suar M., Hauser A., Poiger T., Buser H.R., Müller M.D., Dogra C., Raina V., Holliger C., van der Meer J.R., Lal R. et al., 2005. Applied and Environmental Microbiology, 71 (12) pp. 8514-8518.
[DOI][WoS][Pmid][serval:BIB_BBFEEF092872]
 
Extracellular protease of Pseudomonas fluorescens CHA0, a biocontrol factor with activity against the root-knot nematode Meloidogyne incognita.
Siddiqui I.A., Haas D., Heeb S., 2005. Applied and Environmental Microbiology, 71 (9) pp. 5646-5649.
[DOI][WoS][Pmid][serval:BIB_3368C8F215DA]
Fibrinogen and fibronectin binding cooperate for valve infection and invasion in Staphylococcus aureus experimental endocarditis.
Que Y.A., Haefliger J.A., Piroth L., François P., Widmer E., Entenza J.M., Sinha B., Herrmann M., Francioli P., Vaudaux P. et al., 2005. Journal of Experimental Medicine, 201 (10) pp. 1627-1635. Peer-reviewed.
[URN][DOI][WoS][Pmid][serval:BIB_AC3F5C623CF4]
Genometrics as an essential tool for the assembly of whole genome sequences: the example of the chromosome of Bifidobacterium longum NCC2705.
Guy L., Karamata D., Moreillon P., Roten C.A., 2005. BMC Microbiology, 5 p. 60.
[URN][DOI][WoS][Pmid][serval:BIB_690A08C97CD8]
 
PchR-box recognition by the AraC-type regulator PchR of Pseudomonas aeruginosa requires the siderophore pyochelin as an effector.
Michel L., González N., Jagdeep S., Nguyen-Ngoc T., Reimmann C., 2005. Molecular Microbiology, 58 (2) pp. 495-509.
[DOI][WoS][Pmid][serval:BIB_BDFC95C57ACD]
 
Posttranscriptional repression of GacS/GacA-controlled genes by the RNA-binding protein RsmE acting together with RsmA in the biocontrol strain Pseudomonas fluorescens CHA0.
Reimmann C., Valverde C., Kay E., Haas D., 2005. Journal of Bacteriology, 187 (1) pp. 276-285.
[DOI][WoS][Pmid][serval:BIB_87FF432C8349]
 
Quorum-sensing-negative (lasR) mutants of Pseudomonas aeruginosa avoid cell lysis and death.
Heurlier K., Dénervaud V., Haenni M., Guy L., Krishnapillai V., Haas D., 2005. Journal of Bacteriology, 187 (14) pp. 4875-4883.
[DOI][WoS][Pmid][serval:BIB_9EDBD1C0D22F]
 
Response characteristics of arsenic-sensitive bioreporters expressing the gfp reporter gene
Wells M., Gösch M., Harms H., Van Der Meer J. R., 2005. Microchimica Acta, 151 (3-4) pp. 209-216. Peer-reviewed.
[DOI][WoS][serval:BIB_26268783A915]
 
Role of sigmaB in the expression of Staphylococcus aureus cell wall adhesins ClfA and FnbA and contribution to infectivity in a rat model of experimental endocarditis.
Entenza J.M., Moreillon P., Senn M.M., Kormanec J., Dunman P.M., Berger-Bächi B., Projan S., Bischoff M., 2005. Infection and Immunity, 73 (2) pp. 990-998.
[DOI][WoS][Pmid][serval:BIB_9B7E2760E376]
Role of the stress sigma factor RpoS in GacA/RsmA-controlled secondary metabolism and resistance to oxidative stress in Pseudomonas fluorescens CHA0.
Heeb S., Valverde C., Gigot-Bonnefoy C., Haas D., 2005. FEMS Microbiology Letters, 243 (1) pp. 251-258.
[URN][DOI][WoS][Pmid][serval:BIB_128308AA67F4]
 
RpoN (sigma54) controls production of antifungal compounds and biocontrol activity in Pseudomonas fluorescens CHA0.
Péchy-Tarr M., Bottiglieri M., Mathys S., Lejbølle K.B., Schnider-Keel U., Maurhofer M., Keel C., 2005. Molecular Plant-Microbe Interactions, 18 (3) pp. 260-272.
[DOI][WoS][Pmid][serval:BIB_DC7A66DA94B5]
 
Staphylococcus aureus (Including Staphylococcal Toxic Shock)
Moreillon P., Que Y. A., Glauser M. P., 2005. pp. 2321-2351 dans Mandell G. L., Bennett J. E., Dolin R. (eds.) Mandell, Douglas and Bennett's Principles and Practice of Infectious Diseases chap. 192, Churchill Livingstone.
[serval:BIB_6B91BDA512E8]
 
Structure-function characterization and optimization of a plant-derived antibacterial peptide.
Suarez M., Haenni M., Canarelli S., Fisch F., Chodanowski P., Servis C., Michielin O., Freitag R., Moreillon P., Mermod N., 2005. Antimicrobial Agents and Chemotherapy, 49 (9) pp. 3847-3857.
[DOI][WoS][Pmid][serval:BIB_84A7DD08EC24]
 
Taking the fungal highway: mobilization of pollutant-degrading bacteria by fungi.
Kohlmeier S., Smits T.H., Ford R.M., Keel C., Harms H., Wick L.Y., 2005. Environmental Science and Technology, 39 (12) pp. 4640-4646.
[DOI][WoS][Pmid][serval:BIB_FB3709115BD8]
 
Therapeutic effects of bacteriophage Cpl-1 lysin against Streptococcus pneumoniae endocarditis in rats.
Entenza J.M., Loeffler J.M., Grandgirard D., Fischetti V.A., Moreillon P., 2005. Antimicrobial Agents and Chemotherapy, 49 (11) pp. 4789-4792.
[DOI][WoS][Pmid][serval:BIB_7751028C2219]
 
Three small RNAs jointly ensure secondary metabolism and biocontrol in Pseudomonas fluorescens CHA0.
Kay E., Dubuis C., Haas D., 2005. Proceedings of the National Academy of Sciences of the United States of America, 102 (47) pp. 17136-17141.
[DOI][WoS][Pmid][serval:BIB_7BB7F02593F9]
 
Ultrasensitive reporter protein detection in genetically engineered bacteria.
Wells M., Gösch M., Rigler R., Harms H., Lasser T., van der Meer J.R., 2005. Analytical Chemistry, 77 (9) pp. 2683-2689.
[DOI][WoS][Pmid][serval:BIB_1771FB324C30]
 
Use of green fluorescent protein-based reporters to monitor balanced production of antifungal compounds in the biocontrol agent Pseudomonas fluorescens CHA0.
Baehler E., Bottiglieri M., Péchy-Tarr M., Maurhofer M., Keel C., 2005. Journal of Applied Microbiology, 99 (1) pp. 24-38.
[DOI][WoS][Pmid][serval:BIB_61B5E90C66AA]
 
Using flow cytometry for in situ monitoring of antimicrobial compound production in the biocontrol bacterium Pseudomonas fluorescens CHA0.
de Werra P, Huser A, Baehler E, Keel C, Maurhofer M, 2005. IOBC/WPRS Bulletin, 29 (2) pp. 117-122.
[serval:BIB_37371]
2004
A genomic island present along the bacterial chromosome of the Parachlamydiaceae UWE25, an obligate amoebal endosymbiont, encodes a potentially functional F-like conjugative DNA transfer system.
Greub G., Collyn F., Guy L., Roten C.A., 2004. BMC Microbiology, 4 (1) p. 48.
[URN][DOI][WoS][Pmid][serval:BIB_D9A310F15FF8]
 
A repeated GGA motif is critical for the activity and stability of the riboregulator RsmY of Pseudomonas fluorescens.
Valverde C., Lindell M., Wagner E.G., Haas D., 2004. Journal of Biological Chemistry, 279 (24) pp. 25066-25074.
[DOI][WoS][Pmid][serval:BIB_5D5BFDF7E684]
 
Bacterial transcriptional regulators for degradation pathways of aromatic compounds.
Tropel D., van der Meer J.R., 2004. Microbiology and Molecular Biology Reviews, 68 (3) pp. 474-500.
[DOI][WoS][Pmid][serval:BIB_78BF55226F75]
Bacterial variations on the methionine salvage pathway.
Sekowska A., Dénervaud V., Ashida H., Michoud K., Haas D., Yokota A., Danchin A., 2004. BMC Microbiology, 4 p. 9.
[URN][DOI][WoS][Pmid][serval:BIB_F9297A1647BA]
Ceftriaxone acts synergistically with levofloxacin in experimental meningitis and reduces levofloxacin-induced resistance in penicillin-resistant pneumococci.
Flatz L., Cottagnoud M., Kühn F., Entenza J., Stucki A., Cottagnoud P., 2004. Journal of Antimicrobial Chemotherapy, 53 (2) pp. 305-310.
[URN][DOI][WoS][Pmid][serval:BIB_2ED03440207D]
 
Characterization of cell-to-cell signaling-deficient Pseudomonas aeruginosa strains colonizing intubated patients.
Dénervaud V., TuQuoc P., Blanc D., Favre-Bonté S., Krishnapillai V., Reimmann C., Haas D., van Delden C., 2004. Journal of Clinical Microbiology, 42 (2) pp. 554-562.
[DOI][WoS][Pmid][serval:BIB_823CA526B834]
 
Common mechanisms in beneficial and deleterious host-microbe interactions
Haas D., Reimmann C., Valverde C., 2004. pp. 537-541 dans Tikhonovich I., Lugtenberg B., Provorov N. (eds.) Molecular plant-microbe interactions: new bridges between past and future, St. Paul.
[serval:BIB_6A6A536CA501]
 
Common mechanisms in beneficial and deleterious host-microbe interactions.
Haas D., Reimmann C., Valverde C., 2004. pp. 537-541 dans Tikhonovich I., Lugtenberg B., Provorov N. (eds.) Molecular plant-microbe interactions: new bridges between past and future, International Soc. for Molecular Plant-Microbe Interactions.
[serval:BIB_32146]
 
Cross talk between 2,4-diacetylphloroglucinol-producing biocontrol pseudomonads on wheat roots.
Maurhofer M., Baehler E., Notz R., Martinez V., Keel C., 2004. Applied and Environmental Microbiology, 70 (4) pp. 1990-1998.
[DOI][WoS][Pmid][serval:BIB_D336DA051B8C]
 
Cyanogenesis.
Pessi G., Haas D., 2004. pp. 671-686 dans Ramos J.L. (eds.) Pseudomonas : Biosynthesis of macromolecules and molecular metabolism chap. 22, Kluwer.
[serval:BIB_31946]
 
Design of new promoters and of a dual-bioreporter based on cross-activation by the two regulatory proteins XylR and HbpR.
Tropel D., Bähler A., Globig K., van der Meer J.R., 2004. Environmental Microbiology, 6 (11) pp. 1186-1196.
[DOI][WoS][Pmid][serval:BIB_8519E4BFC615]
 
Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers.
Suar M., van der Meer J.R., Lawlor K., Holliger C., Lal R., 2004. Applied and Environmental Microbiology, 70 (11) pp. 6650-6656.
[DOI][WoS][Pmid][serval:BIB_F279651A4881]
 
Efficacy of garenoxacin in treatment of experimental endocarditis due to Staphylococcus aureus or viridans group streptococci.
Entenza J.M., Vouillamoz J., Glauser M.P., Moreillon P., 2004. Antimicrobial Agents and Chemotherapy, 48 (1) pp. 86-92.
[DOI][WoS][Pmid][serval:BIB_7DFA6F28A1CF]
 
Endocardite infectieuse: mise au point [Infective endocarditis: update]
Que Y.A., Oddo M., Liaudet L., Moreillon P., 2004. Revue Médicale de la Suisse Romande, 124 (6) pp. 341-346.
[Pmid][serval:BIB_EB81A89C11B6]
 
Genetic analysis of phenoxyalkanoic acid degradation in Sphingomonas herbicidovorans MH.
Müller T.A., Byrde S.M., Werlen C., van der Meer J.R., Kohler H.P., 2004. Applied and Environmental Microbiology, 70 (10) pp. 6066-6075.
[DOI][WoS][Pmid][serval:BIB_2B24F71A659B]
 
Genometric analyses of the organization of circular chromosomes: a universal pressure determines the direction of ribosomal RNA genes transcription relative to chromosome replication.
Guy L., Roten C.A., 2004. Gene, 340 (1) pp. 45-52.
[DOI][WoS][Pmid][serval:BIB_5B3A18E73297]
 
Illuminating the detection chain of bacterial bioreporters.
van der Meer J.R., Tropel D., Jaspers M., 2004. Environmental Microbiology, 6 (10) pp. 1005-1020.
[DOI][WoS][Pmid][serval:BIB_4FDEB1A60D64]
 
Infective endocarditis.
Moreillon P., Que Y.A., 2004. Lancet, 363 (9403) pp. 139-149.
[DOI][WoS][Pmid][serval:BIB_E0EF1021F1E3]
 
Inflammation and host defense
Majcherczyk P. A., Moreillon P., 2004. pp. 183-200 dans Tuomanen E. I., Mitchell T. J., Morison D. A., Spratt B. G. (eds.) The Pneumococcus chap. 12, ASM Press.
[serval:BIB_94C856468352]
 
LB11058, a new cephalosporin with high penicillin-binding protein 2a affinity and activity in experimental endocarditis due to homogeneously methicillin-resistant Staphylococcus aureus.
Vouillamoz J., Entenza J.M., Hohl P., Moreillon P., 2004. Antimicrobial Agents and Chemotherapy, 48 (11) pp. 4322-4327.
[DOI][WoS][Pmid][serval:BIB_DB070B6DC718]
 
Measurement of biologically available naphthalene in gas and aqueous phases by use of a Pseudomonas putida biosensor.
Werlen C., Jaspers M.C., van der Meer J.R., 2004. Applied and Environmental Microbiology, 70 (1) pp. 43-51.
[DOI][WoS][Pmid][serval:BIB_B45D4D4D073E]
 
PchC thioesterase optimizes nonribosomal biosynthesis of the peptide siderophore pyochelin in Pseudomonas aeruginosa.
Reimmann C., Patel H.M., Walsh C.T., Haas D., 2004. Journal of Bacteriology, 186 (19) pp. 6367-6373.
[DOI][WoS][Pmid][serval:BIB_330B15D4D751]
 
Positive control of swarming, rhamnolipid synthesis, and lipase production by the posttranscriptional RsmA/RsmZ system in Pseudomonas aeruginosa PAO1.
Heurlier K., Williams F., Heeb S., Dormond C., Pessi G., Singer D., Cámara M., Williams P., Haas D., 2004. Journal of Bacteriology, 186 (10) pp. 2936-2945.
[DOI][WoS][Pmid][serval:BIB_277689FC2EC3]
 
Post-transcriptional regulation in Pseudomonas spp. via the Gac/Rsm regulatory network.
Heeb S., Heurlier K., Valverde C., Cámara M., Haas D., Williams P., 2004. pp. 239-255 dans Ramos J.L. (eds.) Pseudomonas : Virulence and gene regulation chap. 8, Kluwer.
[serval:BIB_31943]
 
Potential role of pathogen signaling in multitrophic plant-microbe interactions involved in disease protection.
Duffy B., Keel C., Défago G., 2004. Applied and Environmental Microbiology, 70 (3) pp. 1836-1842.
[DOI][WoS][Pmid][serval:BIB_8E067FE52A62]
2003
 
Antibiotic-dependent correlation between drug-induced killing and loss of luminescence in Streptococcus gordonii expressing luciferase.
Loeliger B., Caldelari I., Bizzini A., Stutzmann Meier P., Majcherczyk P.A., Moreillon P., 2003. Microbial Drug Resistance, 9 (2) pp. 123-131.
[DOI][WoS][Pmid][serval:BIB_33A8CA65928B]
 
Calcineurin A of Candida albicans: involvement in antifungal tolerance, cell morphogenesis and virulence.
Sanglard D., Ischer F., Marchetti O., Entenza J., Bille J., 2003. Molecular Microbiology, 48 (4) pp. 959-976.
[DOI][WoS][Pmid][serval:BIB_972BB8241B89]
 
Cefotaxime acts synergistically with levofloxacin in experimental meningitis due to penicillin-resistant pneumococci and prevents selection of levofloxacin-resistant mutants in vitro.
Kühn F., Cottagnoud M., Acosta F., Flatz L., Entenza J., Cottagnoud P., 2003. Antimicrobial Agents and Chemotherapy, 47 (8) pp. 2487-2491.
[DOI][WoS][Pmid][serval:BIB_256BFE957857]
 
Characterization of the surface hydrophobicity of filamentous fungi.
Smits T.H., Wick L.Y., Harms H., Keel C., 2003. Environmental Microbiology, 5 (2) pp. 85-91.
[DOI][WoS][Pmid][serval:BIB_D41D448E8A7F]
Degradation of pathogen quorum-sensing molecules by soil bacteria: a preventive and curative biological control mechanism.
Molina L., Constantinescu F., Michel L., Reimmann C., Duffy B., Défago G., 2003. FEMS Microbiology Ecology, 45 (1) pp. 71-81.
[URN][DOI][WoS][Pmid][serval:BIB_6F4F9FDBEBDB]
 
Endocarditis and endarteritis
Moreillon P., 2003. dans Cohen J., Powderly W.G. (eds.) Infectious Diseases chap. 59, Mosby.
[serval:BIB_F3FBB9403340]
 
Essential Bacillus subtilis genes.
Kobayashi K., Ehrlich S.D., Albertini A., Amati G., Andersen K.K., Arnaud M., Asai K., Ashikaga S., Aymerich S., Bessieres P. et al., 2003. Proceedings of the National Academy of Sciences of the United States of America, 100 (8) pp. 4678-4683. Peer-reviewed.
[DOI][WoS][Pmid][serval:BIB_27965]
 
Expression of a plant-derived peptide harboring water-cleaning and antimicrobial activities.
Suarez M., Entenza J.M., Doerries C., Meyer E., Bourquin L., Sutherland J., Marison I., Moreillon P., Mermod N., 2003. Biotechnology and Bioengineering, 81 (1) pp. 13-20.
[DOI][WoS][Pmid][serval:BIB_1432067B496B]
 
Fungicidal synergism of fluconazole and cyclosporine in Candida albicans is not dependent on multidrug efflux transporters encoded by the CDR1, CDR2, CaMDR1, and FLU1 genes.
Marchetti O., Moreillon P., Entenza J.M., Vouillamoz J., Glauser M.P., Bille J., Sanglard D., 2003. Antimicrobial Agents and Chemotherapy, 47 (5) pp. 1565-1570.
[DOI][WoS][Pmid][serval:BIB_C1A5CCC317C2]
 
GacS sensor domains pertinent to the regulation of exoproduct formation and to the biocontrol potential of Pseudomonas fluorescens CHA0.
Zuber S., Carruthers F., Keel C., Mattart A., Blumer C., Pessi G., Gigot-Bonnefoy C., Schnider-Keel U., Heeb S., Reimmann C. et al., 2003. Molecular Plant-Microbe Interactions, 16 (7) pp. 634-644.
[DOI][WoS][Pmid][serval:BIB_E7DE18389E0D]
 
In Bacillus subtilis W23, the duet sigmaXsigmaM, two sigma factors of the extracytoplasmic function subfamily, are required for septum and wall synthesis under batch culture conditions.
Minnig K., Barblan J.L., Kehl S., Möller S.B., Mauël C., 2003. Molecular Microbiology, 49 (5) pp. 1435-1447.
[DOI][WoS][Pmid][serval:BIB_27971]
 
Innate sensors for Gram-positive bacteria.
Weber J.R., Moreillon P., Tuomanen E.I., 2003. Current Opinion in Immunology, 15 (4) pp. 408-415.
[DOI][WoS][Pmid][serval:BIB_9BEA775A7382]
 
Isochorismate synthase (PchA), the first and rate-limiting enzyme in salicylate biosynthesis of Pseudomonas aeruginosa.
Gaille C., Reimmann C., Haas D., 2003. Journal of Biological Chemistry, 278 (19) pp. 16893-16898.
[DOI][WoS][Pmid][serval:BIB_261B86B15BDB]
 
Meropenem prevents levofloxacin-induced resistance in penicillin-resistant pneumococci and acts synergistically with levofloxacin in experimental meningitis.
Cottagnoud P., Cottagnoud M., Acosta F., Flatz L., Kühn F., Stucki A., Entenza J., 2003. European Journal of Clinical Microbiology and Infectious Diseases, 22 (11) pp. 656-662.
[DOI][WoS][Pmid][serval:BIB_7EBB828C3FD3]
 
Negative control of quorum sensing by RpoN (sigma54) in Pseudomonas aeruginosa PAO1.
Heurlier K., Dénervaud V., Pessi G., Reimmann C., Haas D., 2003. Journal of Bacteriology, 185 (7) pp. 2227-2235.
[DOI][WoS][Pmid][serval:BIB_3CF90E390BF3]
 
Persistence and cell culturability of biocontrol strain Pseudomonas fluorescens CHA0 under plough pan conditions in soil and influence of the anaerobic regulator gene anr.
Mascher F., Schnider-Keel U., Haas D., Défago G., Moënne-Loccoz Y., 2003. Environmental Microbiology, 5 (2) pp. 103-115.
[DOI][WoS][Pmid][serval:BIB_8464624A06E2]
 
Proinflammatory activity of cell-wall constituents from gram-positive bacteria.
Moreillon P., Majcherczyk P.A., 2003. Scandinavian Journal of Infectious Diseases, 35 (9) pp. 632-641.
[DOI][WoS][Pmid][serval:BIB_E3EC54BFD61B]
 
Regulation of antibiotic production in root-colonizing Peudomonas spp. and relevance for biological control of plant disease.
Haas D., Keel C., 2003. Annual Review of Phytopathology, 41 pp. 117-153.
[DOI][WoS][Pmid][serval:BIB_DBC3913B856B]
 
RsmY, a small regulatory RNA, is required in concert with RsmZ for GacA-dependent expression of biocontrol traits in Pseudomonas fluorescens CHA0.
Valverde C., Heeb S., Keel C., Haas D., 2003. Molecular Microbiology, 50 (4) pp. 1361-1379.
[DOI][WoS][Pmid][serval:BIB_6EBA306A40BA]
 
Teichoic acids are not required for Streptococcus pneumoniae and Staphylococcus aureus cell walls to trigger the release of tumor necrosis factor by peripheral blood monocytes.
Majcherczyk P.A., Rubli E., Heumann D., Glauser M.P., Moreillon P., 2003. Infection and Immunity, 71 (7) pp. 3707-3713.
[DOI][WoS][Pmid][serval:BIB_67B0F27A67E8]
 
The Bacillus subtilis Gne (GneA, GalE) protein can catalyse UDP-glucose as well as UDP-N-acetylglucosamine 4-epimerisation.
Soldo B., Scotti C., Karamata D., Lazarevic V., 2003. Gene, 319 pp. 65-69.
[DOI][WoS][Pmid][serval:BIB_29636]
 
The stereochemistry of the amino acid side chain influences the inflammatory potential of muramyl dipeptide in experimental meningitis.
Cottagnoud P., Gerber C.M., Majcherczyk P.A., Acosta F., Cottagnoud M., Neftel K., Moreillon P., Täuber M.G., 2003. Infection and Immunity, 71 (6) pp. 3663-3666.
[DOI][WoS][Pmid][serval:BIB_EF442FB2AEC6]
2002
 
Do meteoroids of sedimentary origin survive terrestrial atmospheric entry? The ESA artificial meteorite experiment STONE
Brack A., Baglioni P., Borruat G., Brandstätter F., Demets R., Edwards H.G.M., Genge M., Kurat G., Miller M.F., Newton E.M. et al., 2002/06. Planetary and Space Science, 50 (7-8) pp. 763-772.
[DOI][WoS][serval:BIB_59B0CA292803]
 
Characterization of a Bacillus subtilis thermosensitive teichoic acid-deficient mutant: gene mnaA (yvyH) encodes the UDP-N-acetylglucosamine 2-epimerase.
Soldo B., Lazarevic V., Pooley H.M., Karamata D., 2002. Journal of Bacteriology, 184 (15) pp. 4316-4320.
[DOI][WoS][Pmid][serval:BIB_25985]
 
Comparative Genometrics (CG): a database dedicated to biometric comparisons of whole genomes.
Roten C.A., Gamba P., Barblan J.L., Karamata D., 2002/01. Nucleic Acids Research, 30 (1) pp. 142-144.
[DOI][WoS][Pmid][serval:BIB_2B8C1BB11690]
 
Comparison of ribitol and glycerol teichoic acid genes in Bacillus subtilis W23 and 168: identical function, similar divergent organization, but different regulation.
Lazarevic V, Abellan F-X, Beggah Möller S, Karamata D, Mauël C, 2002. Microbiology, 148 pp. 815-824.
[DOI][Pmid][serval:BIB_20788]
 
Deleterious impact of a virulent bacteriophage on survival and biocontrol activity of Pseudomonas fluorescens strain CHAO in natural soil.
Keel C., Ucurum Z., Michaux P., Adrian M., Haas D., 2002. Molecular Plant-microbe Interactions, 15 (6) pp. 567-576.
[DOI][WoS][Pmid][serval:BIB_C7B4FB4152AC]
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